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39 protocols using simplicity system

1

Cytotoxicity Assay with BSA, Gadolinium, and MTT

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The BSA protein (molecular weights 68KD), Gd(NO3)3·6H2O, NaOH, dimethyl sulfoxide and 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyl tetrazolium bromide (MTT) were obtained from Aladdin Reagent Co. Ltd. (Shanghai, China) and were of analytical grade or above. Ultrapure water was prepared using a Millipore Simplicity system (Millipore, Bedford, USA). All chemicals were used directly without further purification.
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2

Mass Spectrometry Sample Preparation

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During the experiments, the following chemicals were used: acetonitrile (ACN) and methanol (J.T. Baker, Deventer, The Netherlands), both at the HPLC-gradient grade. Betaine aldehyde, α-cyano-4-hydroxycinnamic acid (CHCA), 2,5-dihydroxybenzoic acid (DHB), trifluoroacetic acid (TFA) were at the highest available purity, received from Sigma–Aldrich/Merck (St. Louis, MO, USA) local distributor. The water used in the studies was purified using the Simplicity system from Millipore.
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3

Synthesis and Characterization of ELF Isomers

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The isomers ELF94 and ELF96 used in this study were synthesized, as reported by Dei et al. [23 (link)]. Acetonitrile (Chromasolv), formic acid, ammonium formate (MS grade), verapamil hydrochloride, and ketoprofen (analytical standard) were purchased by Merck (Milan, Italy). ketoprofen ethyl ester (KEE) was obtained by Fisher’s reaction from ketoprofen and ethanol. Ultrapure water or mQ water (resistivity 18 MΩ cm) was obtained from Millipore’s Simplicity system (Milan, Italy). The human plasma was collected from healthy volunteers, pooled, and kept at −80 °C until use. All subjects gave their informed consent for inclusion before they participated in the study. The study was conducted following the Declaration of Helsinki, and the protocol was approved by the local Ethics Committee (Comitato Etico Regionale per la Sperimentazione Clinica della Regione Toscana, Sezione AREA VASTA CENTRO) Institutional Review Board (CE: 11166_spe, 11/09/2018 and CE: 10443_oss, 14/02/2017).
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4

Chitosan-based Biomaterial Synthesis

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Chitosan (CHIT, low molecular weight, 75–85% deacetylated, Sigma-Aldrich), genipin (98%, Challenge Bioproducts), sorbitan monopalmitate (Span®40, Sigma-Aldrich), sorbitan monooleate (Span®80, Sigma-Aldrich), glycidyltrimethylammonium chloride (GTMAC, ≥ 90%, Sigma-Aldrich), cyclohexane (p.a, POCh), glacial acetic acid (CH3COOH, 99,85% pure p.a., CHEMPUR), acetone (POCh), methanol (POCh) and sodium chloride (NaCl, POCh) were used as received. Doubly distilled water was deionized using the Millipore Simplicity system.
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5

Glycoproteomics Analysis Protocol

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The Roswell Park Memorial Institute (RPMI) 1640 medium and fetal bovine serum (FBS) were purchased from Gibco (Grand Island, NY, United States). The BCA assay kit was purchased from Sangon Biotech (Shanghai, China). Dithiothreitol (DTT, 3483–12–3), 2,2,2-trifluoroethanol (TFE, 99%, 75–89–8), acetaldehyde-13C2 (13CH313CHO, 99 atom % 13C, 1632–98–0), acetaldehyde (CH3CHO, 99%, 75–07–0), sodium cyanoborohydride (NaBH3CN, 25,895–60–7), ammonia solution (NH4OH, 7664–41–7), acetonitrile (ACN, 75–05–8), formic acid (FA, 64–18–6), trypsin, and trifluoroacetic acid (TFA) were purchased from Sigma-Aldrich (St. Louis, MO, United States). Ultra-pure water was obtained on-site using the Millipore Simplicity System (Billerica, MA, United States). Ammonium bicarbonate (ABC) was purchased from Sangon Biotechnology (Shanghai, China). ZIC-HILIC particles were purchased from Thermo Fisher Scientific (Waltham, MA United States). PNGase F was purchased from New England Biolabs (Ipswich, MA, United States).
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6

Immunochromatographic Assay for Detecting Neomycin

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The following reagents were used: Chloroauric acid, neomycin trisulfate (NEO), Tween-20, biotinamidohexanoyl-6-aminohexanoic acid N-hydroxysuccinimide ester, sodium citrate (Sigma-Aldrich, St. Louis, MO, USA), streptomycin sulfate (AppliChem, Darmstadt, Germany), bovine serum albumin (BSA) (Boval Biosolutions, Cleburne, TX, USA), streptavidin (Arista Biologicals, Allentown, PA, USA), streptococcal protein G, goat anti-mouse antibodies (GAMI), and anti-mouse antibodies labeled with horseradish peroxidase (Imtek, Moscow, Russia). Anti-NEO monoclonal antibodies and the NEO–BSA conjugate, monoclonal antibodies to streptomycin, and the streptomycin–BSA conjugate were from Eximio Biotec (Wuxi, China). Salts, acids, and alkalis were of analytical or chemical grade. Solutions of GNPs and their conjugates were prepared using deionized water purified by the Simplicity system (Millipore, Billerica, MA, USA). The set of immunochromatographic membranes included the UniSart CN180 working nitrocellulose membrane (Sartorius, Goettingen, Germany), the GFB-R7L sample membrane, the AP-045 adsorption membrane, and the L-P25 plastic support (Advanced Microdevices, Ambala Cantt, India).
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7

UHPLC Solvent Preparation for Plant Analysis

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Acetonitrile, methanol, and formic acid for UHPLC were purchased from Merck (Darmstadt, Germany). Water for UHPLC was purified with a Millipore Simplicity System (Bedford, MA, USA). Solvents for the extraction of plant material were of analytical grade.
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8

HPLC Analysis of Neurometabolites

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Acetonitrile, creatinine, VMA, HVA, Trp, 5-HIAA and indoxyl sulphate (IS) were purchased from Sigma–Aldrich (St. Louis, MO, USA), DHICA from Toronto Research Chemicals Inc. (Toronto, ON, Canada), formic acid from Riedel-de Haёn (Seelze, Germany). Ultrapure water was prepared by ultrafiltration of distilled water using the Simplicity system (Millipore, Molsheim, France). Mobile phase of 15% Acetonitrile (ACN:H2O; 15:85) was prepared in deionised water with an addition of 0.05% formic acid. Stock solutions of creatinine, DHICA, VMA, HVA, Trp, 5-HIAA and IS were prepared by diluting given compounds to a concentration of 1 mg/ml in mobile phase. All reagents were of analytical grade.
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9

Perylene-based Fluorescent Sensor

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Perylene, octadecylamine, poly (isobutylene-alt-maleic anhydride) Mw = 6000, tetrahydrofuran (THF), N, N-dimethylformamide (DMF), glucose, GOX, and invertase were purchased from Sigma-Aldrich (St. Louis, MO, USA). Meso-tetraphenyl-tetrabenzoporphine palladium complex (PdTPBP) was purchased from Fisher Scientific. Ultrapure water was prepared by using a Millipore Simplicity System (Millipore, Bedford, USA). All of the above-mentioned chemicals were used as received without further purification.
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10

Analytical Reagent Procurement Protocol

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Anhydrous solvents and all reagents were purchased from Sigma-Aldrich, Alfa Aesar and TCI. The solvents used in MS measures were acetone, DMSO, acetonitrile (Chromasolv grade), purchased from Sigma-Aldrich (Milan, Italy), and mQ water 18 MΩ, obtained from Millipore’s Simplicity system (Milan, Italy).
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