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Tom20 antibody

Manufactured by Santa Cruz Biotechnology
Sourced in United States

The TOM20 antibody is a tool used in research to detect the presence of the TOM20 protein, which is a component of the translocase of the outer mitochondrial membrane complex. This antibody can be used in various research techniques, such as Western blotting, immunoprecipitation, and immunohistochemistry, to study the localization and expression of the TOM20 protein in different cell types and tissues.

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12 protocols using tom20 antibody

1

Mitochondrial Morphology Analysis in Cancer Cells

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Cells were seeded on 13 mm round glass coverslips at approximately 50% confluence in a 12 well/plate and incubated overnight. After 48 h, cells were fixed with 4% formaldehyde (SIGMA, St Louis, USA) for 20 min. Then, cells were exposed to Triton 0.1% for 5 min and then to blocking solution in PBS with FBS 7% and NaN3 0.02%. Cells were stained with TOM20 antibody (1:300; Santa Cruz) and with anti-rabbit secondary antibody conjugated with Alexa fluor 488 (1:500; Invitrogen). Epifluorescence images acquisition was performed in the Zeiss Confocal Microscope (LSM700 microscope). Images were acquired with 63X objective for osteosarcoma cells and 100X for ovarian cancer cells and 15 planes were acquired in z-stack with a distance of 0.4 μm between each plane for each cell. The following filter was utilized: 488 (Ex. 490–510 / Em. 520–560). After acquisition, images were analyzed using ImageJ analysis software. For analysis of mitochondrial morphology, mitochondria segmentation was performed using the ImageJ Squassh [54 (link)] plugin, and size and morphology features were performed using Fiji.
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2

Mitochondrial Visualization in Cells

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Cells were stained with β-actin antibody (Cell Signaling Technology, Danvers, MA) or Tom20 antibody (Santa Cruz Biotechnology, Dallas, TX) followed by Alexa Fluor®488 F(ab′)2 Fragment of Goat Anti-Rabbit IgG (H+L) antibody as per manufacturer’s instructions. Mitochondria in cells were stained using MitoTracker® Red (Life technologies, Grand Island, NY), according to the manufacturer’s instruction.
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3

Bnip3 Interaction with TOM20 via Immunoprecipitation

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Immunoprecipitation (IP) was performed as described elsewhere [35 (link)]. Myocardial tissues were homogenized in RIPA buffer, and the protease inhibitor PMSF was added. The homogenates were centrifuged at 12,000 rpm for 20 min at 4°C, and 200 μL of the supernatant liquor was collected. Following the standard of 1 μg antibody per 500 μg protein, Tom20 antibody (Santa Cruz Biotechnology) was added for overnight incubation, and the negative control used IgG to replace the Tom20 antibody. Then, the homogenates were incubated with 40 μL of Protein A/G beads (Beyotime Biotech, Jiangsu, China) for 3 h at 4°C. Beads were washed five times in RIPA buffer then centrifuged at 2500 rpm for 5 min each time at 4°C, and the immunoprecipitated proteins were used to analyze the binding relationships between Bnip3 and TOM20 by the Western blotting method. Bnip3 expression of the TOM20-immunoprecipitated products was detected and was balanced by TOM20 blotting results.
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4

Visualizing Adipose Tissue Vasculature

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For H&E staining, tissues were fixed with 10% formalin and paraffin-embedded, and then standard procedures were performed. To label blood vessels in vivo, Fluorescein labeled Griffonia Simplicifolia Lectin I (4 µg per mouse, Vector Laboratories, Cat# FL-1101) was gently injected into 2-month-old male mice via tail vein. After 20 min, the mice were sacrificed and iWAT tissues were isolated and carefully minced with scissors. The iWAT tissues were washed twice with pre-warmed PBS and cover-slipped by Fluoromount-G (SouthernBiotech, Cat#0100-01). For immunofluorescence staining, formalin-fixed and paraffin-embedded tissue sections were deparaffinized and rehydrated through graded ethanol solutions. After pre-incubation with a blocking buffer (PBS containing 5% normal goat serum and 0.3% Triton X-100) for 60 min, slides were incubated with Ucp1 antibody (Sigma, Cat#U6382) (1:500 dilution), Tom20 antibody (Santa Cruz, Cat#sc-17764) (1:100 dilution), or CD31 antibody (1:250) (Millipore Cat#MAB2148-C) in blocking buffer at 4 °C overnight. Subsequently, the slides were washed, and incubated with Alexa Flour 488-conjugated or 594-conjugated secondary antibody and DAPI for 60 min. Images were acquired and processed with the same setting for transgenic mice or knockout mice and control littermates.
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5

Visualizing Mitochondrial Dynamics in Chondrocytes

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For immunofluorescence detection of the outer mitochondrial membrane protein, TOM20 chondrocytes were cultured for 24 h on glass coverslips in a 24-well plate, fixed with 4% PFA/PBS for 10 min at RT, permeabilized with 0.5% NP-40/PBS for 10 min, and incubated with 1% FCS/PBS for 30 min at RT. The TOM20 antibody (Santa Cruz) was added, and after 1 h at RT cells were washed three times with blocking buffer and incubated with appropriate Alexa-Fluor–conjugated secondary antibodies and DAPI for an additional 45 min at RT. In addition, chondrocytes were transfected with 1 µg plasmid DNA (pOCT-YFP; Neuspiel et al., 2008 (link)) per well using XtremeGENE HP (Roche) according to the manufacturer’s protocol in a 1:2 ratio (DNA:XtremeGENE HP) to fluorescently label mitochondria (MitoYFP). 24 h after transfection cells were fixed in 4% PFA/PBS for 10 min at RT. After mounting (Dako), images were acquired using a TCS SP5 microscope controlled with LAS AF Software (Leica).
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6

Measuring Oxidative Stress Markers

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All chemicals including cell culture medium (Dulbecco´s modified Eagle´s medium (DMEM)) as well as the catalase-polyethylene glycol (PEG-catalase) were obtained from Sigma or Merck (Darmstadt, Germany) unless otherwise stated. The fetal bovine serum was from Pan Biotech (Aidenbach, Germany). The Protein Assay Kit (Bio-Rad DC, detergent compatible) was from Bio-Rad Laboratories (Feldkirchen, Germany). The enhanced chemiluminescence system (SuperSignal West Pico/Femto Maximum Sensitivity Substrate) was supplied by Pierce (Fisher Scientific, Schwerte, Germany). Penicilin/Streptomycin was obtained from Biochrom (Berlin, Germany) and Glutamax from Gibco (Darmstadt, Germany). MitoTEMPO was purchased from Enzo Life Sciences (Lausen, Schweiz). MitoSOX Red and MitoTRACKER Green FM were obtained from Fisher Scientific (Schwerte, Germany). Beta-actin antibody was purchased from Cell Signaling (Massachusetts, USA). The polyclonal rabbit α-hapten antibody directed against dimedone tagged sulfenic acids was kindly provided from K.S. Carroll [35 (link)]. TOM-20 antibody was purchased from Santa Cruz Biotechnology (Dallas, USA). DMSO was obtained from Roth (Karlsruhe, Germany). Horseradish peroxidase (HRP) conjugated goat anti-rabbit IgG from Dianova (Hamburg, Germany) and HRP conjugated rabbit anti-mouse IgG from Dako (Glostrup, Denmark) were used as a secondary antibody.
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7

Western Blot Analysis of Mitochondrial Proteins

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The samples obtained were separated under denaturing conditions in 12.5% SDS-PAGE and transferred to a nitrocellulose membrane (0.2 μm pore). Precision Plus Pre-stained Standards from Bio-Rad Laboratories (Hercules, CA, USA) were used as markers. After overnight blocking, each membrane was incubated with the appropriate primary antibody. The polyclonal TSPO antibody (1:1000), monoclonal VDAC 1, and polyclonal VDAC 3 antibody (1:1000) were obtained from Abcam (Cambridge, UK); the monoclonal VDAC antibody (1:1000) was purchased from Calbiochem (San Diego, CA, USA); the polyclonal rabbit phospho-Akt (Ser473), phospho-GSK-3β (Ser9), and Akt antibodies (dilution 1:250) were obtained from Cell Signaling (Leiden, Netherlands). The monoclonal anti-CNP antibody (anti-CNP Ab) was obtained as described [43 (link)] and used at a 1:10,000 dilution, the monoclonal GSK3β antibody was used at a 1:2000 dilution, and the Tom 20 antibody (Santa-Cruz, Dallas, TX, USA) served as a loading control and was used at a 1:2000 dilution. Immunoreactivity was detected using the appropriate secondary antibody conjugated with horseradish peroxidase (Jackson Immuno Research, West Grove, PA). Peroxidase activity was detected using Enhanced chemiluminescence (ECL) reagents (Bio-Rad, Hercules, CA, USA).
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8

Immunoblot Analysis of Mitochondrial Proteins

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Immunoblot analysis was performed as we described previously30 (link). Rabbit polyclonal anti-ANT-1 antibody and rabbit monoclonal anti-β-actin antibody were from Sigma-Aldrich (St Louis, MO, USA, SAB2105530, 1:1,000) and Cell Signaling (Danvers, MA, USA, 4970, 1:5,000), respectively. Rabbit polyclonal anti-ANT2 antibody was generated by immunization with KLH-conjugated N-terminus ANT2 peptide (NH-TDAAVSFAKDFLAG-COOH) at Lampire Biological Laboratories (Ottsville, PA, USA) and purified with protein G (GE Healthcare, Buckinghamshire, UK) and antigen-conjugated columns. The ANT2 antibody was diluted to 1:200 as being used. COX IV (4850, 1:1,000) and VDAC (4866, 1:1,000) antibodies were from Cell Signaling (Danvers, MA, USA). Tom20 antibody was from Santa Cruz Biotechnology (sc-11415, 1:500), Catalase and SOD2 antibodies were from Sigma (St. Louis, MO, USA, C0979, 1:1,000) and Abcam (Cambridge, UK, ab16956, 1:1,000), respectively. Uncropped scans of the critical immunoblots are shown in Supplementary Fig. 6.
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9

Mitochondrial Localization Analysis in SKOv3-ARHI Cells

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SKOv3-ARHI cells were seeded into a 75 cm2 flask and allowed to reach confluence. Cells were treated with 1 μg/mL of Doxycycline for different time points as previously discussed. After treatment, cells were trypsinized and harvested at 500xg for 10 min. Cells were then fixed in 3 % formaldehyde and permeabilized with 0.1 % Triton X-100. Cells were then counted, aliquoted and incubated in 2 μg of TOM20 antibody (Santa Cruz Biotechnology) for 40 min. Cells were then washed and incubated in F(ab’) 2-Goat anti Rabbit IgH (H + L) Secondary Antibody, Alexa Fluor® 488 conjugate (Thermo Scientific).
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10

Immunofluorescence analysis of fibroblasts

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For immunofluorescence, patients’ and controls fibroblasts were seeded at the density of 20 x 103 in 24-well cluster plates onto 12-μm cover glasses. After 24 h of culture in complete medium, cells were fixed with 3% PFA (30 min at 4°C) or absolute chilled methanol for 10 min at −20°C. After permeabilization with 0.5% TritonX-100 (10 min at room temperature), fibroblasts were stained with mouse monoclonal anti-Lamp1 antibody (Cell signaling), and/or rabbit polyclonal TOM20 antibody (Santa Cruz) and rabbit polyclonal GM130 antibody (Abcam), followed by the appropriate secondary antibody (Life Technologies) and DAPI.
To promote the autophagosomes formation fibroblasts were treated with EBSS medium (Earle’s Balanced Salt Solution) with or without bafilomycin for 4 hours, fixed with absolute chilled methanol for 10 min at −20°C. Cells were stained with a rabbit polyclonal anti-LC3I/II antibody (Cell Signaling) followed by the appropriate secondary antibodies (Life Technologies) and DAPI.
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