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15 protocols using b220 pe

1

Multicolor Flow Cytometry Panel

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Abs against following antigens: CD3-FITC, CD3-APC, CD25-FITC, CD4-PE, CD4-PECy7, CD8-PE, B220-PE, NK-1.1-PE, CD69-APC, FOXP3-PE, IFN-γ-APC, Isotype-matched control Ab, Annexin V-FITC, 7AAD, Purified anti-CD25 mAb (PC61) were purchased from BioLegend (San Diego, CA). The murine recombinant cytokines (IL-2, IL-12) were from Peprotech (Rocky Hill, NJ).
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2

Multiparametric Flow Cytometry of Immune Cells

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BAL cells were stained separately with two antibody cocktails. The first was for NK cells with NK1.1-PE (BD PharMingen), T cells with TCRβ-APC (BD PharMingen) and NKT cells NK1.1-PE and TCRβ-APC. The second stain was for neutrophils with Ly6G-FITC (BD PharMingen) and B cells with B220-PE (Biolegend). NKT cells were identified using CD1dα-GALCER tetramer conjugated to APC. Propidium Iodide was used to exclude dead cells before data were acquired using either FACSCalibur or FACSCantoII.
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3

Isolation and Stimulation of Splenic B Cells

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Splenic B cells of TAPtag mice were isolated using CD43 magnetic beads (Miltenyi Biotec) negative selection and cultured in RPMI1640 containing 15% FBS with 20 μg/ml LPS (Sigma-Aldrich) and/or 20 ng/ml IL4 (R&D) for 48~72 hrs. CH12F3 cells were cultured in RPMI1640 containing 10% FBS and stimulated with 20 μg/ml LPS (Sigma-Aldrich), 20 ng/ml IL4 (R&D) and 1 ng/ml TGFβ (R&D). Stimulated splenic B cells were stained with B220-PE (Biolegend) and IgG1-FITC (BD Bioscience) and stimulated mutant CH12F3 cells were stained with IgA-FITC (BD Bioscience). Cells were analyzed by using LSRII and FlowJo (BD Bioscience).
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4

Multiparameter Flow Cytometry Analysis

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FACS analysis were performed with routine protocols using the FACS Calibur flow cytometer (BD Immunocytometry Systems), antibodies used for mice spleen lymphocyte staining are as following: CD3-Percp cy5.5, CD4-FITC, APC, CD8-Percp cy5.5, PE, CD19-FITC, B220-PE, CD69-FITC, CD80-FITC, CD86-APC, CD40-PE (Biolegend) and bone marrow staining: F4/80-PE, CD11b-FITC, MHC-II-PerCP cy5.5 (Biolegend). FACS buffer; 1 × PBS (Gibco) + 2% FBS (Sigma). All data were analyzed using FlowJo (Tree Star, Inc.).
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5

Multiparameter Flow Cytometry Analysis

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Spleens were mechanically disrupted, single-cell suspensions were generated, and red blood cells were lysed with ammonium chloride TRIS. Cells were resuspended in PBS containing 1% FBS and incubated with indicated antibodies. For analysis of cell surface markers, antibodies against the following molecules were used: B220-PE (RA3–6B2; BioLegend), B220-BV786 (RA3–6B2; BD Biosciences), B220-BV510 (RA3–6B2; BioLegend), CD4-BV711 (GK1.5; BioLegend), CD8 BV421 (53–6.7; BioLegend), CD138-PECy7 (281–2; BioLegend), CD69-BV786 (H1.2F3; BD Biosciences), CD86-PerCPCy5.5 (GL-1; BioLegend). After cell surface staining, the cells were fixed and permeabilized with Cytofix/Cytoperm (BD) (as per manufacturer’s instructions) and stained with Dylight650-E4 anti-Ars/A1 idiotype (produced and conjugated in our laboratory) OR HEL-650 (produced and conjugated in our laboratory) and Alexa Fluor 488-anti-GFP (rabbit polyclonal; Life Technologies). Events were collected on a CyAn ADP (Dako) and subsequent analysis using FlowJo software (Tree Star).
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6

Multiparametric Flow Cytometry of Murine and Human B-Cells

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Single‐cell suspensions were stained with a mixture of 5 to 6 fluorophores including and 7‐aminoactinomycin D (7‐AAD) for viability and acquired on the BD Verse flow cytometer with data analyzed using FlowJo software (BD Biosciences). Human B‐cell subsets were identified using the following antibodies: CD19‐APC, CD27‐BV510, CD38‐APC‐Cy7, CD24‐BV421, and IL‐10‐PE‐Cy7 (all from BioLegend). Mouse B‐cell subsets were identified using the following antibodies: B220‐PE, CD23‐APC, CD21‐PE‐Cy7, IgM‐BV421, CD138‐APC, CD86‐PE‐Cy7, CD69‐APC‐Cy7, and IL‐10‐APC‐Cy7 (all from BioLegend). Intracellular IL‐10 expression was detected as previously reported.33 Immunophenotype of human and murine B‐cell subsets analyzed are listed in Supplementary Table 1.
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7

Tissue Dissociation and Cell Isolation

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Splenocytes were isolated by mincing and mechanical dissociation of tissue through a 40-mm cell strainer. Cells were isolated into phosphate-buffered saline with 1% bovine serum albumin, 2 mM EDTA, and 25 mM HEPES. Red cells were removed by ammonium-chloride-potassium lysis. Cells were then stained with either a myeloid marker panel (CD45-BV421, CD11b-BV605, Ly6C-FITC, Ly6G-PECy7; BioLegend) or lymphoid marker panel (CD45-BV421, CD11b-BV605, B220-PE, CD3e-FITC; BioLegend). Cells were analyzed on an Attune cytometer and reported as the percentage of CD45 cells.
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8

Fetal Liver and Spleen Analysis

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The fetal livers and spleens of transplanted embryos (E18.5) were isolated and homogenized using 18 G needles with 1 ml syringes or microscope slides (Matsunami Glass Ind., Ltd., Osaka, Japan). After ACK lysis buffer treatment, cells were stained with the following antibodies. For mouse HSC-transplanted embryos, anti-mouse CD45.1 APC or PE, CD45.2 PE/Cy7 or FITC, CD11b APC/cy7, B220 PE, and CD3 PE (BioLegend, San Diego, CA) were used. For rat HSC-transplanted embryos, anti-mouse CD45.2 FITC or PerCP and anti-rat CD45 PE (BioLegend) were used. Erythroid cells were detected from the fetal livers of rat HSC-transplanted embryos by staining with anti-mouse and anti-rat erythroid cell antibodies (BioLegend). Gallios, CytoFLEX (Beckman Coulter, Brea, CA) and Kaluza v1.3, CytExpert software (Beckman Coulter) as well as BD-LSR (BD Biosciences, San Jose, CA) and FlowJo software (TreeStar, Ashland, OR) were used for the data acquisition and analysis.
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9

Isolation and Characterization of Dendritic Cells

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Freshly isolated live (7AAD2; BD Biosciences) dLN cells and in vitro– derived BM cells were stained with combinations of fluorochrome-conjugated Abs to CD4–Pacific Blue or CD4-PE/Cy5 (clone GK 1.5); CD3-PE/Cy7, CD3-PE/Cy5, CD3-PE, or CD3-FITC (17A2); CD11c-PE/Cy7, CD11c-FITC, or CD11c-Orange 605 (N418); CD11b-PE/Cy7 or CD11b-FITC (M1/70); B220-PE or B220-BV 510 (RA3-6B2); CCR7-PE (4B12); Siglec-H–Pacific Blue or Siglec-H–FITC (551); PDCA-1–PE or PDCA-1–FITC (927); CD19-PE/Cy7 or CD19-PE/Cy5 (6D5); CD25-PE (PC61.5) (BioLegend); and T1ST2 (DIH9) (T1ST2-FITC [MD Biosciences] or T1ST2–PE [BioLegend]). For intranuclear staining of Foxp3, a permeabilization kit and Abs (Foxp3–Pacific Blue or Foxp3-PE/CyC5; clone FJK-16s) were used (eBioscience). Flow cytometric measurements were performed using an Attune Acoustic Focusing Cytometer (Applied Biosystems) and a FACSAria III (BD). FACS sorting of pDCs was performed using a FACSAria III. Data analysis was performed with FlowJo software (TreeStar).
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10

Induction of Ig Isotypes in B Cells

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CD43-negative B cells from spleen were stimulated with LPS (20 μg/ml) (Sigma-Aldrich) for IgG3; LPS (20 μg/ml) and IL4 (20 ng/ml) (PeproTech) for IgG1; and LPS (10 μg/ml) (Sigma-Aldrich), TGF-β (2 ng/ml) (R&D Systems), and anti-IgD dextran (0.33 μg/ml) (Fina Biosolutions) for IgG2b and IgA CSR. CSR efficiency of each isotype was measured after 3 to 4 days. B220-PE (BioLegend)/IgG3-FITC (fluorescein isothiocyanate) (BD Biosciences) and B220-FITC (BD Biosciences)/IgG2b-PE (BioLegend), IgA-PE (eBioscience), or IgG1-PE (BD Biosciences) were used for staining cells for FACS analyses.
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