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38 protocols using p akt

1

Myoblast Differentiation Protein Analysis

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Muscle tissues and C2C12 myotubes were lysed in RIPA buffer for 30 minutes, followed by homogenate and centrifugation at 12 000 g for 15 minutes at 4°C. The protein concentrations were determined using a BCA protein assay kit (Thermo Fisher Scientific, USA). The protein samples were applied to 12% SDS polyacrylamide gels, transferred to PVDF membranes, blocked with 5% BSA TBST buffer and incubated with the following primary antibodies according to the manufacturer's recommendations: anti‐myostatin, anti‐MAFbx, anti‐MuRF‐1, anti‐MyoD, anti‐myogenin (all 1:1000; Abcam, England), p‐PI3K, PI3K, p‐Akt, Akt, p‐FoxO3a, FoxO3a (all 1:1000; Affinity, USA) and GAPDH (1:10 000; Affinity, AF7021). Then, the membranes were incubated with a corresponding secondary antibody (1:5000; Affinity, USA) at room temperature for 1 hour and washed with 1× TBST 3 times. Finally, the protein bands were visualized with an ECL Western Blotting Substrate Kit (Millipore, 1622301, USA) and were captured in a CCD system (Image Station 2000 MM, Kodak, USA).
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2

Protein Expression Analysis of Myocardial Tissue

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Myocardial tissue without reflow or H9C2 cells was lyzed with RIPA lysis buffer on ice for 20 min. The concentrations of protein were quantified with a BCA assay, and each sample was denatured. Equal amounts of total protein were resolved by polyacrylamide gel electrophoresis and transferred onto Poly vinylidene fluoride (PVDF) membranes. The membranes were blocked for 2 h with 5% bovine serum albumin. Then, the membranes were incubated with primary antibodies against Beclin-1 (Abcam, No. ab62557), LC3 (CST, No. 12741), AKT (Affinity, No. AF6261), p-AKT (Affinity, No. AF0016), mTOR (Affinity, No. AF6308), p-mTOR (Affinity, No. AF3308), p65 (CST, No. 4764), p-p65 (CST, No. 3031) and GAPDH (Abcam, No. ab8245) (all at 1:1,000 dilutions) overnight at 4°C followed by incubation with an HRP-conjugated secondary antibody (1:5,000 dilution) at room temperature for 1 h. The western blot images were acquired using an enhanced chemiluminescence system on Hyperfilm X-ray films (Beijing JUNYI Electrophoresis Co., Ltd., JY02S). Image Lab software was used for densitometric analysis. The protein level of GAPDH was used as the loading control.
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3

Immunoblotting of Cell Signaling Proteins

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Protein samples were separated by SDS-PAGE and transferred to polyvinylidene fluoride membranes. After blocking with 5% non-fat milk in Tris-buffered saline Tween-20 (TBST), the membranes were incubated with primary antibodies against IL-17 (#AO688, Abclonal Technology, China), Foxp3 (#GB11093, Servicebio, China), phosphoinositide 3-kinase (PI3K) (#bsm-33219m, Bioss, China), phospho (p)-PI3K (Tyr317, #bs-5570R, Bioss, China), protein kinase B (Akt) (#GB11689, Servicebio, China), p-Akt (Ser473, #AF0908, Affinity, USA), FoxO1 (#GB11286, Servicebio, China), p-FoxO1 (Thr24, #9464T, Cell Signaling Technology, USA) or GLP-1R (#CSB-PA009514YA01HU, Cusabio, China) at 4℃ overnight. The membranes were then incubated with horseradish peroxidase-conjugated secondary antibodies. Proteins were detected using an enhanced chemiluminescence system (Clinx Science Instruments, China).
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4

Immunohistochemical and Immunofluorescence Analysis of Skin Tissue

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For immunohistochemical staining, 4-μm-thick sections received antigen retrieval and endogenous peroxidase activity blocking. Then, the samples were incubated in goat serum for 30 min at room temperature to block the nonspecific antigen, followed by incubating in primary antibodies against K10 (1:200; Santa Cruz), K14 (1:200; Santa Cruz), and p-AKT (1:250; Affinity Biosciences) overnight at 4 ℃. Finally, the immune reactivities of the sections were determined using the HRP-streptavidin detection system (ZSGB-bio, Beijing, China). Images from above-mentioned sections were acquired with a BX63 fluorescence microscope (Olympus).
For immunofluorescence staining, 4-μm-thick sections received antigen retrieval and permeabilizing with 0.5% Triton X-100. After blocking with goat serum (Solarbio), primary antibodies against Ki67 (1:250; Affinity Biosciences), Cytokeratin (Pan) (1:200; Huabio, Hangzhou, China), E-cad (1:200; Affinity Biosciences), Vim (1:500; Abcam), and N-cad (1:200; Santa Cruz) were loaded and kept overnight at 4 ℃. Then, Alexa Fluor 488- and Alexa Fluor 594-conjugated secondary antibodies (Abcam) were loaded at room temperature for 2 h. The nuclei were stained with DAPI (Beyotime), with the images visualized via the LSM-980 confocal microscope (Carl Zeiss).
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5

Western Blot Analysis of Rat Hippocampal Proteins

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Rat hippocampal tissues were washed 2–3 times with pre-chilled PBS, cut into small pieces and homogenized by adding ten times the volume of tissue in RIPA lysis buffer (Beyotime Institute of Biotechnology, China). Then the supernatant was collected by centrifugation and homogenization (12,000 rpm, 4°C, 10 min), which is the total protein of rat hippocampal tissue. The BCA protein assay kit (AS1086, ASPEN, Wuhan, China) was used for the quantification of total proteins. Samples were separated by SDS PAGE and electro-transferred onto PVDF (0.45 um) membranes (Servicebio,G6015-0.45, Wuhan, China) after activation with methanol. The membranes were then incubated overnight at 4°C with specific primary antibodies:CB1 (Servicebio,GB111214), PI3K(BIOSS,BSM-33219M), P-PI3K (BIOSS,bs5570R), AKT (Servicebio,GB11689), P-AKT (Affinity,AF0908), STAT3 (Servicebio,GB11176), P-STAT3 (RuiyingBiological, RLP0250), Bcl2 (Servicebio, GB113375), BAX (Servicebio, GB11690),ACTIN(Servicebio, GB12001). The membranes were washed three times with TBST for 10 min each. After washing, the membranes were incubated with HRP anti-conjugated secondary antibody (Servicebio, GB23303) for 1 h. The membranes were washed in the same manner as described above. Membranes were scanned using the Fluor Chem FC3 system (Protein Simple, United States).
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6

Protein Expression Analysis Protocol

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Whole-cell protein was extracted with the RIPA lysis buffer containing protease inhibitor (Beyotime) and protein phosphatase inhibitor (Beyotime) on ice. Equal amounts of protein (30 μg) were loaded into 10% (w/v) SDS-PAGE and transferred to a polyvinylidene difluoride membrane (Millipore, St. Louis, MO, USA), with the membrane then incubated with primary antibodies at 4 °C overnight, followed by three series of TBST washing and 2 h of HRP-conjugated secondary antibodies incubation at room temperature. The proteins were visualized through chemiluminescence and imaged on a Gelview 6000 Pro (BLT Co., Ltd, Guangzhou, China). The protein bands were quantified by densitometry analysis using Image J software.
The primary antibodies used in this study included antibodies against GAPDH (1:1000; Affinity Biosciences), Vim (1:1000; Abcam), E-cad (1:1000; Affinity Biosciences), N-cad (1:1000; Santa Cruz, Cincinnati, OH, USA), PI3K (1:1000; Santa Cruz), AKT (1:1000; Santa Cruz), p-PI3K (1:1000; Affinity Biosciences), p-AKT (1:1000; Affinity Biosciences), and PTHR1 (1:1000; Affinity Biosciences).
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7

Immunofluorescent Staining of Signaling Proteins

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The cell plate was permeabilized for 15 min, followed by adding 3% bovine serum albumin (BSA) solution (Solarbio) for blocking at room temperature for 20 min. The BSA was removed from the samples, following which the AKT (1:200; CST), p‐AKT (1:200; Affinity), VEGF (1:200; Affinity), bFGF (1:200; Affinity), and PI3K (1:100; Abcam) antibodies were introduced and incubated at a temperature of 4°C in a humidified environment. All slices were then treated with a secondary antibody (1:500) and incubated in the dark at 37°C for 30 min. The cells were subjected to restaining with 4′,6‐diamidino‐2‐phenylindole for a duration of 5 min in the absence of light. Observation of the cells and collection of images was carried out using a fluorescence microscope (Evident).
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8

Comprehensive Cell Signaling Protocol

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These materials using in this study are mentioned in prior study, such as 3-(4,5-Dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), DMSO 5-FU, RIPA lysis buffer, crystal violet, 4% paraformaldehyde solution, Dulbecco’s modified eagle medium (DMEM), penicillin-streptomycin, Phosphate buffered saline (PBS), Fetal Bovine Serum (FBS), Pierce BCA protein assay kit, and Super Signal™ West Pico Chemiluminescent Substrate kit, TRIzol lysis buffer, and The Prime Script RT reagent Kit and TB Green™ Premix Ex Taq™ II (Tli RNaseH Plus) [10 ,14 ]. Hoechst 33258 reagent was from Beyotime Biotechnology (Jiangsu, China). The primary antibodies against Bcl-2, Bax, cleaved-caspase 3, cleaved caspase 9, GAPDH and β-actin were purchased from Cell Signaling Technology (Beverly, MA, USA). P-R-Ras, P-ERK1/2, P-PI3K, VEGFA, P-AKT, HIF-1A, and P-ERK1/2 antibodies were purchased from Affinity Biosciences (Cincinnati, OH, USA).
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9

Protein Expression Analysis in Cells

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Total protein lysates were separated by sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred to a 0.22 μm polyvinylidene difluoride membrane (Millipore, Billerica, MA). They were then incubated with specific antibodies according to the manufacturer’s protocol. The GAPDH antibody was used as the control. The primary antibodies were as follows: FOXO3a (Abways, CY5079, Shanghai, P.R. China); p-FOXO3a (Abways, CY5562, Shanghai, P.R. China); PI3K (Abways, CY5355, Shanghai, P.R. China); p-PI3K (Abways, CY6427, Shanghai, P.R. China); GAPDH (Abways, AB0037, Shanghai, P.R. China); AKT (Affinity Biosciences, AF6261, USA); p-AKT (Affinity Biosciences, AF016, USA); NF-κB (Affinity Biosciences, AF5006, USA); p-NF-κB (Affinity Biosciences, AF2006, USA); BCL-6 (Affinity Biosciences, DF2903, USA); c-Myb (Affinity Biosciences, AF6136, USA); p53 (Affinity Biosciences, AF0879, USA); cylinG2 (Affinity Biosciences, DF2284, USA); cyclin B1 (Affinity Biosciences, AF6188, USA).
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10

Molecular Mechanisms of PPII-Induced Apoptosis

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Cells were treated with different doses of PPII (1.85 µg/mL for U87, 5 µg/mL for U251) for 24 h, and washed twice in cold PBS. Then the treated cells were collected and lysed in RIPA lysis buffer, bicinchoninic acid (BCA) kit was used to determine protein concentration, all the protein samples were quantified to be the same concentration. Cell lysates (50 µg) were subjected to sodium dodecyl sulfate (SDS)-polyacrylamide gel electrophoresis (PAGE) and transferred onto polyvinylidene difluoride (PVDF) membrane. Then incubated with the primary antibody at 4 ˚C overnight after blocked with 5% non-fat dry milk, and then incubated again with the secondary antibody in a dark place for 1 h. The protein level was corrected using glyceraldehyde-3-phosphate dehydrogenase (GAPDH). P-AKT (Affinity Biosciences, Inc., USA, product code: AF0908), AKT (Servicebio Inc., China, product code: GB13427), BAX (Servicebio Inc., China, product code: GB11690), caspase 3 (Servicebio Inc., China, product code: GB11767C), cleaved-caspase 3 (Servicebio Inc., China, product code: GB11009), cytochrome C (Servicebio Inc., China, product code: GB11080), BCL2 (Wanleibio Co, China, product code: WL0234), GAPDH (Santa Cruz Biotechnology, Inc., USA, product code: sc-32233).
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