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P81 filters

Manufactured by Cytiva

P81 filters are laboratory equipment used for filtration. They are made of cellulose-based material and are designed to separate and retain materials based on size and other physical properties.

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7 protocols using p81 filters

1

Plk1 Methyltransferase Activity Assays

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For dot blot assays, 30 μg of aliquots of each of nonmethylated K209 peptide or phosphorylated T210 peptide of Plk1 was incubated with roughly 0.5 μg of methyltransferase moieties immunoprecipitated from 293T cells in the presence of 0.1 mM S-adenosyl-methionine (SAM; Sigma) at 30°C for 1 hour in the buffer [50 mM tris-HCl (pH 8.0), 10% glycerol, 20 mM KCl, 5 mM MgCl2, and 1 mM phenylmethyl sulfonyl fluoride]. Reactions were spotted onto nitrocellulose membranes and immunoblotted with an α-Plk1 K209me1 antibody. The monomethylated Plk1 K209 peptide served as a control.
For protein methylation assays, 1-μg amount of bacterially or insect cell–expressed recombinant wild type or K209R GST–N-Plk1 was incubated overnight with G9a-SET fragments immunoprecipitated from 293T cells in the presence of 2 μCi of 3H-labeled SAM at 30°C. Reactions were spotted onto P81 filters (Whatman) and washed four times with 50 mM NaHCO3 (pH 9.0) before scintillation counting. Alternatively, reactions were quenched by adding an equal volume of 2× SDS sample buffer. Radiolabeled protein was separated by SDS-PAGE gel, followed by Coomassie blue staining or autoradiography.
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2

Measuring Myocardial Protein Kinase G Activity

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Myocardial protein kinase G (PKG) activity was assessed in homogenized tissue samples. Tissues samples were homogenized in 25 mmol/l Tris (pH 7.4), 1 mmol/l EDTA, 2 mmol/l EGTA, 5 mmol/l dithiothreitol (DTT), 0.05% Triton X‐100, and protease inhibitor cocktail (Sigma Aldrich) and centrifuged for 5 minutes. Supernatants containing equal amounts of total protein were analyzed for PKG activity. The reaction mixture contained (at final concentration): 40 mmol/l Tris‐HCl (pH·7.4), 20 mmol/l magnesium acetate, 0.2 mmol/l [32P] ATP (500–1,000 c.p.m.·pmol−1) (GE Healthcare LifeScience, Little Chalfont, U.K.), 113 mg/ml heptapeptide (RKRSRAE), 3 mmol/l cGMP (Promega, Madison, WI) and a highly specific inhibitor of cAMP‐dependent protein kinase (5–24, Merck Millipore). The reaction mixtures were incubated at 30°C for 10 minutes, followed by termination of the reaction by spotting 70·μl of the reaction mix onto Whatman P‐81 filters, which were then soaked with 75·mmol/l H3PO4 for 5 minutes and washed three times with 75·mmol/l H3PO4 to remove any unbound [32P] ATP. Filters were rinsed with 100% ethanol and air dried before quantification. For quantification of PKG activity, counts were taken in a Wallac 1409 Liquid Scintillation Counter using universal scintillation cocktail. Specific activity of PKG was expressed as pmol of [32P] incorporated into the substrate (pmol/minute/mg protein).
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3

Assay for GGTase II Activity

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GGTase II activity was determined using the method of Seabra and James with some modifications as previously described.13 (link),32 (link) Briefly, reactions were initiated with the addition of 5 µM [3H]-GGPP to reaction buffer (50 mM sodium HEPES, 5 mM MgCl2, 1 mM dithiothreitol, 1 mM NP-40) containing 30 nM recombinant GGTase II (Jena Biosciences), 2 µM recombinant Rab1A, and 1 µM recombinant REP-2 (Jena Biosciences) with or without the test compounds. After a 20 minute incubation at 37 °C, reactions were terminated by the addition of 200 µL 10% HCl/EtOH. Samples were filtered through P-81 filters (Whatman) by a Brandel harvester. Filters were then washed in EtOH, dried, and counted using liquid scintillation counting. Recombinant Rab1A was prepared by transforming BL21 Star DE3 competent cells with a plasmid containing N-His-tagged Rab1A (GeneCopoeia). A Qiagen Ni-NTA Fast Spin kit was used to purify the recombinant protein. Protein content was determined using the BCA method.
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4

In Vitro Methylation of Tubulin by SET8

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Approximately 1 μg of recombinant GST-SET8 (in 50% glycerol) and 2 μg of purified tubulin (MP Biomedicals, 08771151), recombinant MBP-α-tubulin, or recombinant MBP-β-tubulin were incubated with 6 μm radioactively labeled [3H]AdoMet (PerkinElmer Life Sciences, NET155V001MC) in 5 mm Tris (pH 8.0) and 0.5 mm DTT at room temperature overnight. As indicated, histone H4 (New England Biolabs, M2504S), recombinant His-LSF protein, or FQI1 inhibitor was added to the reaction. Samples were separated by electrophoresis through a 10% N-[2-hydroxy-1,1-bis(hydroxymethyl)ethyl]glycine gel (Invitrogen), and the gel was stained with Coomassie Brilliant Blue (shown in grayscale in the figures) and incubated with EN3HANCE (PerkinElmer Life Sciences) solution. The gel was dried and exposed to autoradiography film for 1 week. For the peptide assays, the specific peptides of α-tubulin were synthesized from AnaSpec Inc. Sequences are listed in Table S1. 2 μg of each peptide and 2 μg of purified WT or mutant SET8 or SETD2 (aa 1392–2564, Active Motif) were incubated with radioactively labeled [3H]AdoMet at room temperature overnight. Samples were spotted onto P81 filters (Whatman, 3698325), and the filters were washed three times with 0.3 m ammonium bicarbonate. The level of incorporated [3H]CH3 was determined using liquid scintillation counting.
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5

Quantification of PKG Activity

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To assess PKG activity tissue samples (n=6–7 LV samples/steady state) were homogenized in a buffer (in mM: 25 Tris (pH 7.4), 1 EDTA, 2 EGTA, and 5 DTT; 0.05% Triton X-100; protease inhibitor cocktail from Sigma-Aldrich, Munich, Germany), followed by centrifugation for 5 min. Supernatants containing equal amounts of total protein were analyzed for PKG activity. The reaction mixture contained (at final concentration): 40 mM Tris-HCl (pH 7.4), 20 mM magnesium acetate, 0.2 mM [γ−32P]ATP (500–1,000 cpm/pM; Amersham Pharmacia Biotech, Freiburg, Germany), 113 mg/mL heptapeptide (RKRSRAE), 3 mM cGMP (Promega, Madison, WI, USA) and a highly specific inhibitor of cAMP-dependent protein kinase (5–24, catalogue #116805; Calbiochem, San Diego, CA, USA). The reaction mixtures were incubated for 10 min at 30°C, followed by termination of the reaction by spotting 70 μl of the reaction mix onto Whatman P-81 filters, which were then soaked with 75 mM H3PO4 for 5 min and washed three times with 75 mM H3PO4 to remove any unbound [γ−32P]ATP. Filters were rinsed with 100% ethanol and air dried before quantification. For quantification of PKG activity, counts were taken in a Wallac 1409 Liquid 4 Scintillation Counter using universal scintillation cocktail (ICN). Specific activity of PKG was expressed as pM of 32P incorporated into the substrate (pM/min/mg protein).
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6

hnRNPA2 Histone Acetyltransferase Assay

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Filter-binding KAT assays were performed as previously described [51 (link)]. Affinity-purified recombinant hnRNPA2 proteins
(100 nm) were incubated at 30 °C for 20 min with
either 50 μm synthetic histone amino terminal peptides H4
(residues 1–19; active motif) or 5 μg of HeLa mononucleosomes
(EpiCypher, The Woodlands, TX, USA, Cat#16-0002) in the presence of either
50 μm14C acetyl-CoA (American Radiolabeled Chemicals, Saint Louis, MO, USA) in a
30 μl reaction volume. Reaction products were spotted on P-81 filters
(Whatman), air-dried and washed extensively in 0.2m sodium carbonate buffer
and scintillation counts were taken.
For the KAT assays with the inhibitors, CTK7A is a water soluble compound and LTK14,
garcinol and isogarcinol are solubilized in DMSO. DMSO alone was used in control assays
run alongside. Notably, DMSO alone did not show any effect on the HAT activity of
hnRNPA2 protein (data not shown).
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7

Methyltransferase Activity Assay for G9a

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For protein methylation assays, 1 µg aliquot of bacterially expressed various recombinant GST‐hG9a‐SET proteins were individually incubated with recombinant histone H3 at 30 °C overnight, in the presence of 0.5 µCi of 3H‐labeled S‐adenosyl‐methionine or cold SAM. Reactions were spotted onto Whatman P81 filters and washed four times with 50 mm NaHCO3 (pH 9.0) before scintillation counting. Alternatively, reactions were quenched by adding an equal volume of 2× SDS sample buffer. Radioactive labeled proteins were detected by CBB staining or Western blotting.
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