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2 protocols using pa5 19468

1

Cerebrum Protein Extraction and Western Blot

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Proteins have been isolated from a complete cross section of the OCT-embedded cerebrum at the level of the hippocampus. Cells were lysed in radioimmunoprecipitation assay (RIPA) buffer (1 mM phenylmethylsulfonyl fluoride, 1% sodium deoxycholate, 50 mM Tris–HCl [pH 7.4], 1% Triton X-100, 0.1% SDS, 150 mM NaCl) with added protease inhibitor cocktail (cOmplete, EDTA free; Roche Diagnostics GmbH, Mannheim, Germany). The total protein concentration of each sample was determined using the Pierce™ BCA™ Protein-Assay (Thermo Fisher, Rockford, IL, USA) according to the manufacture’s instructions. 20 µg of total protein were separated by SDS–polyacrylamide gel electrophoresis followed by transfer to polyvinylidene difluoride (PVDF) membranes (Novex™). Rabbit polyclonal antibodies were used to detect IL-1β (P420B; Thermo Fisher; 1:1000), IL-18 (PA5-79481; Thermo Fisher; 1:1000), and Laminin (PA5-19468; Thermo Fisher; 1:1000). Then, blots were incubated with a peroxidase-coupled goat anti-rabbit secondary antiserum (32460; Thermo Fisher; 1:500) and the binding was visualized using SuperSignal™ West Femto Maximum Sensitivity Substrate (34095; Thermo Fisher) and a ChemiDoc™ MP Imaging System (BioRad). For band size determination PageRuler™ Plus Prestained Protein Ladder (10 to 250 kDa; 26620; Thermo Fisher) was used.
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2

Immunoblotting of Antibody-Induced Protein

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SDS-polyacrylamide gels were transferred to a PVDF membrane (IPVH00010, Millipore) using a Trans-Blot SD Semi-Dry Transfer Cell (1703940, Bio-Rad) for 1 hr at 19 V. Immunoblots were blocked with PBST (PBS, 0.1% Tween 20) plus 4% non-fat dry milk (NC9121673, Fisher) for 30 min at 25°C, and all subsequent incubations were carried out in this solution. Rabbit anti-AID polyclonal antibodies were generated by Covance. The following antibodies were used for immunoblotting: rabbit anti-AID (Chaudhuri Lab, (Chaudhuri et al., 2003 (link)), 1:500), mouse anti-HSP90 (MAB3286, R&D systems, 0.25 μg/mL), rabbit anti-Lamin-B1 (PA5–19468, ThermoFisher Scientific, 0.2 μg/mL), mouse anti-α-Tubulin (T9026, Sigma, 1:2,000), mouse anti-MBP (E8032, NEB, 1:10,000). Primary antibodies were incubated for ~12 hrs at 4°C, with the exception of anti-HSP90, which was incubated for 1 hr at 25°C.
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