The largest database of trusted experimental protocols

11 protocols using ab5096

1

Immunohistochemical Analysis of Nr5a1 and 5hmC

Check if the same lab product or an alternative is used in the 5 most similar protocols
This method was performed as described previously26 (link). Briefly, tissues were fixed in 4% paraformaldehyde, embedded in Tissue-Tek OTC compound (Sakura Finetek Japan) and cut into 10-μm sections. The sections were incubated with primary antibodies (rat anti-Nr5a1 (Trans Genic Lnc, KO610), rabbit anti-5hmC (Active Motif, #39791), anti-Sox9 (Millipore, AB5535), goat anti-Foxl2 (Abcam, ab-5096)), overnight at 4 °C. For fluorescence staining, the sections were incubated with Alexa-conjugated secondary antibodies (Life Technologies) at room temperature for 1 h and counterstained with DAPI. The sections were mounted in Vectashield (Vector) and observed with a confocal laser scanning microscope (LSM700, Carl Zeiss). Co-immunostaining for Nr5a1 and 5hmC was performed in the order: antibody reaction for Nr5a1 (1st: 4 °C, O/N and 2nd: RT, 1 h) → 2 N HCl treatment (RT, 20 min) → antibody reaction for 5hmC (1st: RT, 1 h and 2nd: RT, 1 h).
+ Open protocol
+ Expand
2

Immunofluorescence Analysis of Embryonic Gonads

Check if the same lab product or an alternative is used in the 5 most similar protocols
Whole embryos were recovered and IF analyses were carried out on fixed, paraffin-embedded 7 mm sections using standard methods as detailed previously47 (link). H&E histological staining was performed on 7μm-thick sagittal sections (E14.5 and 6 weeks) according to standard protocols. IF was conducted using high pH antigen retrieval and blocking in 10% heat inactivated horse serum in PBTX. Primary antibodies used were: goat anti-AMH (1:500, Santa Cruz Biotechnology), rabbit anti-FOXL2 (1:650, generated as described previously48 ), mouse anti-MVH (1/600; code ab27591, Abcam), goat anti-FOXL2 (1/200; code ab5096, Abcam), rabbit anti-SOX9 (1/200; code AB5535, Millipore), chicken anti-b-galactosidase (1/200; code ab9361, Abcam). Secondary antibodies (all from Molecular Probes, Invitrogen) were goat anti-mouse IgG Alexa Fluor 594, goat anti-rabbit IgG Alexa Fluor 488, and goat anti-chicken IgY Alexa Fluor 488, donkey anti-rabbit Alexa Fluor 647, donkey anti-goat Alexa Fluor 488. Slides were imaged on an Olympus BX-51 fluorescence microscope.
+ Open protocol
+ Expand
3

Ovarian Protein Extraction and Western Blot Analysis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total protein from ten ovaries was extracted in WIP Tissue and Cell lysis solution containing 1 mM phenylmethylsulfonyl fluoride (Cell Signaling Technologies, USA) according to the manufacturer’s instructions. The samples were separated on 10% SDS-PAGE and then transferred to polyvinylidene fluoride (PVDF) membranes (IPVH00010, Millipore, USA), which were incubated with appropriate primary antibodies overnight at 4 °C. Primary antibody dilution: GSK-3β (1:200; #12456P, Cell Signaling Technology, MA, USA), p-GSK-3β (1:200; #AG753-1, Beyotime Biotechnology, Shanghai, China), β-catenin (1:500; #sc-7199, Santa Cruz Biotechnology, CA, USA), p-β-catenin (1:500; #9561S, Cell Signaling Technology, MA, USA), p63 (1:200; # BS1279, Bioworld, MO, USA), DDX4 (1:1000; #ab27591, Abcam, MA, USA), FOXL2 (1:1000; #ab5096, Abcam, MA, USA), Caspase-3 (1:1000; #ab32351, Abcam, MA, USA), and GAPDH (1:1000; #AM4300, Ambion, USA) (Additional file 7: Table S3). GAPDH was used as an internal control. The membranes were rinsed thoroughly with TBST and incubated with peroxidase-conjugated secondary antibody (1:5000; #ZB2301, ZSGB-BIO, China) at room temperature for 1 h. The membranes were then rinsed thoroughly with TBST and visualized using SuperSignal West Pico chemiluminescent detection system (Prod 34080, Thermo, USA).
+ Open protocol
+ Expand
4

Immunostaining of Ovarian Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The samples were fixed in 4% PFA-PBS at 4°C for 12 h, dehydrated, and embedded in paraffin. Serial sections (approximately 4 μm in thickness) were used for immunostaining for markers, as described previously [21 (link), 32 (link)]. The sections were incubated with anti-AMH (1:800 dilution; sc-6886; Santa Cruz), anti-FOXL2 (1:600 dilution; ab5096; Abcam), anti-mouse Vasa homologue (MVH; formally DEAD box polypeptide 4 [Ddx4]; 1:2,000 dilution; ab13840; Abcam), anti-SOX9 (1:10,000 dilution; AB5535; Merck Millipore), or anti-3β-hydroxy-delta-5-steroid dehydrogenase (3β-HSD; 1:200; sc-30821; Santa Cruz) antibody at 4°C for 12 h. The reaction was visualized with a biotin-conjugated secondary antibody in combination with the Elite ABC kit (Vector Laboratories) or by Alexa-Fluor-488/594-conjugated secondary antibodies (Invitrogen).
For morphometric analyses, anti-AMH-stained sectioning samples with maximum ovarian area were photographed, and the numbers of AMH-positive follicles were estimated in each image. The ovarian area was also measured histologically using ImageJ 1.48V software (National Institutes of Health, Bethesda, MD, USA), and the relative numbers of AMH-positive follicles per 100 μm2 of ovarian area were estimated.
+ Open protocol
+ Expand
5

Immunofluorescence Localization of Vasa and Foxl2

Check if the same lab product or an alternative is used in the 5 most similar protocols
Briefly, after being deparaffinized, rehydration, and wash in 0.01 M PBS (pH =7.2), sections were incubated with 3% H2O2 for 10 min at room temperature to block endogenous peroxidase, subjected to high‐pressure antigen recovery sequentially in 0.01 M citrate buffer (pH =6.0) for 3 min, permeabilized in 0.1% Triton X‐100 for 30 min, then washed once in PBS, and incubated with blocking solution (5% goat serum and 0.1% BSA in PBS) for 2 h at room temperature and then with the diluted primary antibodies overnight at 4°C. The following primary antibodies were used: Vasa (ab13840, Abcam, 1:200) and Foxl2 (ab5096, Abcam, 1:200). Blocking solution without the primary antibody served as negative control. After washing with PBS, sections were incubated with appropriate secondary antibodies, Alexa Fluor® 594 donkey anti‐goat IgG (H + L) or FITC goat anti‐rabbit IgG (H + L). Nuclei were stained with 0.5 μg/ml Hoechst in VECTASHIELD mounting medium. Fluorescence was detected and imaged using Axio Imager Z2 Fluorescence Motorized Microscope (Carl Zeiss).
+ Open protocol
+ Expand
6

Immunofluorescent Staining of Gonad and Mesonephros

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gonad and mesonephros complexes harvested from embryos at 13.5 dpc were fixed overnight in 4% (w/v) paraformaldehyde in PBS and embedded in paraffin. Antigen retrieval for paraffine sections (7 μm) was performed by microwave-boiling for 15 min in 0.01 M citrate buffer (pH 2.0). After three washes in PBS, the sections were incubated in 10% (w/v) FBS in PBS at room temperature for 60 min and subsequently incubated with a diluted primary antibody overnight at 4 °C. Anti-SOX9 antibody (AB5535; Millipore, Burlington, MA, USA) and anti-FOXL2 antibody (ab5096; Abcam) were diluted 1:500. After rinsing in PBS with 0.1% (v/v) Triton-X once and in PBS twice, sections were incubated with the secondary antibody conjugated with donkey anti-rabbit Alexa Fluor 488 (A21206, Life Technologies) and donkey anti-goat Cy3 (705–165–147; Jackson ImmunoResearch) for 1 h at room temperature. Sections were rinsed in PBS, counterstained with 4,6-diamidino-2-phenylindole (DAPI, Dojindo, 1:1000), and mounted using Fluoromount (Diagnostic BioSystems, Pleasanton, CA, USA). Digital images were taken using an Olympus FV-10i confocal laser-scanning microscope (OLYMPUS, Tokyo, JAPAN) and transferred to Photoshop CS (Adobe, San Jose, CA, USA) for the generation of figures.
+ Open protocol
+ Expand
7

Immunohistochemical Analysis of Gonadal Markers

Check if the same lab product or an alternative is used in the 5 most similar protocols
The gonad-mesonephros complexes before and after culture were fixed in 4%
paraformaldehyde in 0.1 M phosphate buffer (pH 7.4) for 2 hr at 4°C. The specimens were
dehydrated with an ethanol series followed by xylene and then embedded in paraffin. Then,
5-µm-thick sections were cut by a sliding microtome and placed on slide
glasses. Immunohistochemical staining was carried out as described previously [42 (link)]. For the primary antibody, we used an anti Amh
(anti-Müllerian hormone) goat polyclonal antibody (1:24,000; sc-6886; Santa Cruz
Biotechnology, Santa Cruz, CA, USA), anti-Sox9 rabbit polyclonal antibody (1:1,000;
sc-20095; Santa Cruz Biotechnology) or anti-Foxl2 (forkhead box L2) goat polyclonal
antibody (1:25,000; ab5096; Abcam, Cambridge, UK). For the secondary antibody, we used a
Dako EnVision+ system-HRP (horseradish peroxidase)-labeled polymer (Dako Japan,
Tokyo, Japan) or peroxidase-conjugated donkey anti-goat IgG (ab97112; Abcam).
+ Open protocol
+ Expand
8

Immunofluorescent Staining of Ovaries and Testes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Ovaries and testes were fixed after dissection by immersion in 4% paraformaldehyde at 4°C. Immunofluorescent stainings were performed on cryosections. The following primary antibodies were used: rabbit anti-SOX9 (Merck Millipore, catalog number AB5535), rat anti-GFP (Nacalai Tesque, 04404-84), goat anti-GFP (Abcam, ab5449), goat anti-FOXL2 (Abcam, ab5096), rabbit anti-FOXL2 (a gift from D. Wilhelm), rabbit anti-DDX4 (Abcam, ab27591), and rabbit anti-USP7 (Bethyl Laboratories, A300-033A). Slides were then incubated with Alexa Fluor secondary antibodies. Imaging of stained tissue sections was performed on a Leica SPE confocal microscope.
+ Open protocol
+ Expand
9

Gonadal Cell Morphology and Protein Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Gonads from adult animals, infants and embryos were fixed in 4% PFA and embedded in paraffin wax. The embedded samples were sectioned at 5μm and stained with Hematoxylin and Eosin according to standard protocols.
For protein spatio-temporal detection experiments, indirect immunofluorescence was used. In brief, sample slides were incubated overnight with the primary antibody at a dilution according to the manufacturer's instructions. Next, samples were incubated with specific Alexa secondary antibodies 488 and 568 together with DAPI for 1 h at room temperature. Slides were then mounted in fluoromount-G solution (SouthernBiotech) and pictures were taken either with a laser confocal Zeiss LSM700 or a Zeiss Axiovert 200 M microscope. Primary antibodies and working dilutions were as follows: mouse anti-SALL1 (Abcam ab41974, dilution 1:100), goat anti-FOXL2 (Abcam ab5096, dilution 1:200) and rabbit anti-SOX9 (Cell Signaling 82630, dilution 1:200).
+ Open protocol
+ Expand
10

Oocyte and FEC Marker Analysis in Rodent CRs

Check if the same lab product or an alternative is used in the 5 most similar protocols
The oocyte marker DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 (DDX4) and the FEC marker fork head box L2 (FOXL2) were analyzed to determine whether the oocytes of CRs, in particular those in MOFs or DNOs, showed biological characteristics similar to those of other rodents. Briefly, DDX4 and FOXL2 were expressed in germ cells and FECs from the time of their first appearance to adulthood in mice (Yamashita et al., 2015 (link)). Deparaffinized sections were treated with 10 mM citrate buffer for 20 min at 105°C for antigen retrieval. These sections were then blocked with 5% normal donkey serum (Sigma-Aldrich, St. Louis, MO, United States). They were incubated overnight with rabbit anti-DDX4 (1:500 dilution; ab13840; Abcam, Cambridge, United Kingdom) and goat anti-rabbit FOXL2 antibody (1:1000; ab5096; Abcam) at 4°C. The sections were incubated for 1 h at room temperature with Alexa Fluor-488 labeled donkey anti-rabbit IgG (1:500, Life Technologies, Carlsbad, CA, United States) and Alexa Fluor-564 labeled donkey anti-goat IgG (1:500, Life Technologies) for DDX4 and FOXL2 double immunofluorescence. The sections were counterstained with Hoechst 33342 (1:200; Dojindo, Kumamoto, Japan). The stained sections were examined using a BZ-X710 microscope (Keyence).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!