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Alexa 546

Manufactured by Abcam
Sourced in United Kingdom

Alexa 546 is a fluorescent dye used for labeling and detection in various biological applications. It is a synthetic fluorophore that emits light in the red-orange region of the visible spectrum. Alexa 546 is commonly used for immunofluorescence, flow cytometry, and other fluorescence-based techniques.

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3 protocols using alexa 546

1

Tissue Expression Analysis of ARSA Protein

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To analyze the tissue expression of the ARSA protein, transverse or sagittal cryostat sections of CNS and PNS organs obtained from minipigs were used. For immunofluorescent labeling, sections were blocked with 5% normal goat serum then incubated with a primary antibody (anti-ARSA, Cloud-Clone, Tokyo, Japan) and subsequently incubated with secondary antibodies (Alexa 546, Abcam, Cambridge, UK). Following successive washes in PBS, sections were counterstained with 4′,6-diamidino-2-phenylindole (DAPI) (10 μg/mL in PBS, Sigma-Aldrich) to visualize nuclei. Sections were mounted with a medium (ImmunoHistoMount, Santa Cruz, CA, USA) and examined using an LSM 700 confocal scanning microscope (Carl Zeiss, Jena, Germany).
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2

Immunofluorescence in Acute Hippocampal Slices

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For immunofluorescence, animals were anesthetized with 4% isoflurane and acute hippocampal slices were prepared as described in the section on slice preparation. The slices were then placed in 4% paraformaldehyde for 1 h at room temperature. After washing with PBS, the slice was transferred to a 30% sucrose solution in PBS and left overnight at 4 °C. Sections (40 μm) were cut with a cryotome (Leica Biosystems, Wetzlar, Germany). The sections were then mounted and permeabilized with 0.3% Triton X-100 in PBS for 30 min, and nonspecific binding sites were blocked with 5% goat serum in PBS for two hours at room temperature. Sections were then incubated with primary antibody (anti-RGS14 1:200; Abcam, Waltham, MA, USA) overnight at 4 °C. After three washes with PBS, sections were incubated with a species-specific secondary antibody (goat anti-rabbit Alexa 546, 1:400; Abcam) in 5% goat serum for 1 h. After application of DAPI in 0.01 M PBS (100 ng/mL, 28718-90-3, Roche, Switzerland) for 5 min and three additional washes with PBS, the sections were mounted onto slides (Fluoromount Aqueous Mounting Medium, Sigma, Livonia, MI, USA), and fluorescence images were captured using a fluorescence microscope system.
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3

Immunohistochemical Analysis of Nerve and Spinal Cord

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Animals were anesthetized and sacrificed on day 21 after implantation of cancer cells. The sciatic nerve eroded by tumor mass and spinal cord were removed and postfixed at 4 o C for 5 h with 4% paraformaldehyde/PBS (pH7.4). The postfixed sciatic nerve and spinal cord were transferred to 15% sucrose/PBS for 24 h and then 30% sucrose/PBS for 24 h. The samples were frozen at -80 o C, serially cut with a cryostat (15 μm) and mounted on silane-coated slides.
After washing with ice cold PBS, sciatic nerve and spinal cord were blocked in solution containing 10 % normal goat serum and 0.1% Triton X-100 for 2 h at 4 o C. The sections were then incubated at 4 o C with primary antibodies against CD11b (1:1000; Cat# MCA711G, AbD Serotec, Oxford, UK), Iba1 (1:1,000; Cat# 01919741, FUJIFILM Wako Pure Chemical Tokyo, Japan), CD68 (1:500, Cat# 137001, BioLegend, San Diego, CA), or myelin-basic protein (1:500, Cat# 836504, BioLegend) for 48 h. After washing, the sections were incubated with a fluorescent-conjugated secondary antibody (Alexa 488, Alexa 546, Alexa 555 or Alexa 647, 1:1,000; Abcam, Cambridge, UK) at 4 o C for 2 h. The slides were covered with one drop of Vectashield (Vector Laboratories, Burlingame, CA), and then cover-slipped. Fluorescent images were obtained with confocal fluorescence microscopy.
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