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4 protocols using cell cycle test plus dna reagent kit

1

Cell Cycle Analysis by Flow Cytometry

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Cell cycle analysis was performed using Cell cycle test plus DNA reagent kit (BD Biosciences) following the manufacturer’s instructions. Briefly, cells were seeded in 6-well plates at a density of 2×105cells/well. After overnight culture, cells were treated with leptin and/or tamoxifen for the indicated time duration. After washing with PBS and buffer solution, Buffer solution A, solution B, and the propidium iodide solution were sequentially added to the cells, followed by incubation for 15 min in ice on dark. Finally, DNA contents in the cells stained with propidium iodide were determined using a flow cytometer (BD FACSverse). Cell distribution in different phases of the cell cycle was analyzed using BD FACSuite software.
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2

Mahanine-Induced Apoptosis in Cancer Cells

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DMSO and Giemsa stain were purchased from Sigma (MO, USA); MTS-PMS assay kit was from Promega (WI, USA); Apoptotic DNA Ladder Kit was from Roche (Basel, Switzerland); JC1 dye was from ThermoFisher Scientific (OR, USA), H2DCFDA was from Molecular probes (OR, USA); Annexin V-PI assay kit, BDOpt EIATMELISA set, Superscript first stand synthesis system was from Invitrogen (CA, USA); Cell Cycle Test Plus DNA reagent kit, 7-AAD and anti-SHP1 antibody were purchased from BD Pharmingen and BD Biosciences (CA, USA); UCP2 antibody was from SantaCruz Biotechnology (CA, USA). All other antibodies were purchased from Cell Signaling Technologies (USA). Mahanine was dissolved in 100% ethanol to make 5000 μM for in vitro studies and dissolved in >5% DMSO for in vivo studies.
Inbred Balb/c mice (20–22 g) were housed in Institute Animal Facilities in CSIR-CDRI and fed a standard diet. All the animal-related experiments were performed in accordance with the National Regulatory Guidelines issued by Committee for the Purpose of Control And Supervision of Experiments on Animals (CPCSEA), Ministry of Environment and Forest, Govt. of India and used for experiments with prior approval from Institutional Animal Ethical Committee (IAEC)(IAEC approval no: IAEC/2015/42D).
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3

Reagents and Assays for Cell Viability

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Reagents used for the cell culture were obtained from HyClone laboratories (South Logan, UT, USA). Recombinant mouse leptin was purchased from Sigma-Aldrich (St. Louis, MO, USA). Cell viability (MTS assay) and Caspase-3/7 activity assay kits were gained from Promega Corporation (Madison, WI, USA). Cell cycle test plus DNA reagent kit was acquired from BD (San Jose, CA, USA). Antibodies against p53, Bax, Cyclin D1, USP2 and β-actin were procured from Cell Signaling (Beverly, MA, USA). Antibody against ubiquitin, a mouse monoclonal antibody raised against amino acids 1-76 representing full length Ub of bovine origin, was obtained from Santa Cruz Biotechnology (Santa Cruz, CA, USA). All other chemicals were obtained from Sigma-Aldrich (St. Louis, MO, USA) unless stated elsewhere.
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4

Apoptosis and Cell Cycle Analysis

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Cells were plated in a 12-well plate (Costar, Wilkes Barren, PA) at a density of 2 × 10 5 cells/well and exposed to either BBE or FF using the IC 50 obtained in the cytotoxicity assays. Following an incubation of 24 h, cells were trypsinized and washed with cold phosphate-buffered saline (PBS); the number of apoptotic cells was determined using the annexin V (AV)-FITC/PI apoptosis assay kit (Miltenyi Biotech, Auburn, CA). A minimum of 1 × 10 4 events was recorded using FACS Canto™ II system (BD, San Jose, CA). Fluorescence intensities for both AF and PI were obtained and analyzed in FACSDiva software (BD Biosciences). Double positive (AF and PI) or single positive (AF) were set as apoptotic cells. For the cell cycle analysis, the Cell CycleTEST ™ plus DNA reagent kit BD (San Jose, CA) was used. A total of 1 × 10 4 events were captured and histograms of PI fluorescence intensity were used to determine the distribution of cells in three major phases within the cycle (G1 vs. S vs. G2/M). The percentage of cells in each cycle was determined using the ModFit LT 3.2, Verity Software House (Topsham, ME). All experiments were run in triplicate.
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