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2 protocols using p0883

1

Murine BMDM inflammasome activation

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Primary murine BMDMs were seeded in 96-well plates overnight before use (1x106 cells/ml). Cells were primed with lipopolysaccharide (LPS; E.coli O26:B6) (1 μg mL−1) (Sigma, L2654) in DMEM (10% v/v FBS, 1% v/v penicillin–streptomycin, 1% v/v pyruvate) for 4 h, before the media was replaced with ‘treatment media’ constituting DMSO (1% v/v) (Sigma, D2650) or brazilin (≥98% purity; HPLC) (Merck, SML2132; Rahway, NJ, USA) (30, 10, 3, 1, 0.3, 0.1, 0.03 or 0.01 μM) in serum-free DMEM (1% v/v penicillin–streptomycin, 1% v/v pyruvate). After 15 min treatment incubation, NLRP3 was activated by adding nigericin (10 μM) (Sigma, N7143) into the wells, with ethanol (0.5% v/v) used as a vehicle control, and incubated for 2 h. Alternatively, to assess the direct effect of brazilin treatment on AIM2 or NLRC4 inflammasome activation, cells were transfected with either 1 μg mL−1 poly(deoxyadenylic-deoxythymidylic) acid sodium salt (poly(dA:dT), Sigma, P0883) or 1 μg mL−1 flagellin from Salmonella typhimurium (Invivogen, tlrl-stfla), respectively, using Lipofectamine 3000 (Thermofisher, L3000001) diluted in OptiMEM (Thermofisher, 11058021) per manufacturer’s instructions, for 2 h. Following 2-h inflammasome activation, supernatants were collected and used for cell death analysis and Enzyme-Linked Immunosorbent Assays (ELISA).
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2

Immuno-signaling Pathway Analysis Protocol

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Poly(I:C) (P1530), poly(dA:dT) (P0883), Amlexanox (SML0517), 5-FU (F6627), and antibodies specific for Flag (M3165), α-tubulin (T6199), and β-actin (A2228) were from Sigma-Aldrich. Antibodies specific for pIRF3-396 (29047), IRF3 (11904, Western blot [WB]/immunofluorescence [IF]), MST1 (3682), pMOB1-T35 (8699), MOB1 (13730), LATS1 (3477), SAV1 (13301), pYAP-S127 (13008), pYAP-397 (13619), YAP (14074, ChIP), MAVS (3993), STING (13647), and HA (3724, WB/IF/ChIP) were from Cell Signaling Technology; those for IRF3 (sc-9082, IHC/ChIP), YAP (sc-271134, WB), and TEAD4 (sc-101184, ChIP) were from Santa Cruz Biotechnology; and those for Ki67 (ab15580), TEAD4 (ab58310), and YAP (ab39361, IP/IF/IHC) were from Abcam. Phos-tag–conjugated acrylamide was purchased from Wako Chemicals.
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