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6 protocols using potassium superoxide

1

Electrochemical Detection of Superoxide Radicals

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MCF-7 was bought from Cell bank of the representative culture preservation committee of the Chinese Academy of Sciences, China. Manganese sulfate (MnSO4), potassium phosphate tribasic (K3PO4) and Nafion were purchased from East Sichuan Chemical Industry (Group) Co., Ltd. (Chongqing, China) and used as received. Graphene was obtained from Sinocarbon Materials Technology Co., Ltd., China. Zymosan A (Zym, from Saccharomyces cerevisiae) SOD, DNA (low molecular weight extracted from salmon sperm), and potassium superoxide were purchased from Sigma-Aldrich and used without further purification. The O2˙ solutions were prepared by dissolving KO2 in PBS solution (pH 7.0, N2 saturated). The concentration of O2˙ was determined by the reduction of ferri cytochrome c spectrophotometrically.21 (link) All the other solutions were prepared using deionized water (18 MΩ cm) and were degassed with high purity nitrogen before experiments. All electrochemical experiments were carried out at room temperature.
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2

PTP1B Inhibition Assay Protocol

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N-Methyl-4-piperidone, Benzaldehyde, Diisopropylamine, n-Butyllithium (2.5 M solution in hexanes), 4-(Dimethylamino)pyridine (DMAP), and Sodium bicarbonate were purchased from Merck. Acetic acid, Dichloromethane, Tetrahydrofuran, Ethanol, Ethyl acetate, Citric acid, Sodium Sulfate(VI), and Acetic anhydride were purchased from POCH, Gliwice, Poland. Vanilin was purchased from Acros, Waltham, Massachusetts, USA. Dimethyl-sulfoxide (DMSO), Potassium superoxide, 18-crown-6-ether, Nitro blue tetrazolium chloride (NBT), Curcumin, Fetal bovine serum (FBS), 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT), recombinant PTP1B phosphatase, para-nitrophenyl phosphate (pNPP), and 2′,7′-dichlorofluorescein were purchased from Sigma-Aldrich, Saint Louis, Missouri, USA. Dulbecco’s Modified Eagle’s Medium (DMEM) and Phosphate-buffered saline (PBS) were purchased from PAN-biotech, Aidenbach, Germany. Lastly, 4–20% MP TGX Tain-Free Gel 10W was purchased from Bio-Rad Laboratories, Hercules, CA, USA and PTP1B antibodies were purchased from Cell Signaling, Danvers, MA, USA.
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3

Synthesis and Characterization of Mitochondrial Compounds

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2-Deoxyglucose, potassium superoxide, dtpa, ferricytochrome c, Tempol, oligomycin, dinitrophenol, and antimycin A were purchased from Sigma-Aldrich (St. Louis, MO, USA). DIPPMPO spin trap was synthesized, as reported previously [15 ,16 (link)]. Mito-CP was synthesized according to the previously published procedure [17 (link)]. Mito-Tempol2 was from Cayman, and Mito-Tempol4 was synthesized according to a modified procedure [18 (link)]. The synthetic pathway for Mito-CP-Ac is shown in Supplemental Figure 1.
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4

Cytotoxicity Assay of Chemical Compounds

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4-Cyanobenzaldehyde, benzil, 4-bromobenzoic acid, bis(pinacolato)diboron, 1,1′-carbonyldiimidazole (CDI), [1,1′-bis(diphenylphosphino)ferrocene]dichloropalladium(II)dichloride (PdCl2 (dppf)), H2O2, potassium super-oxide (KO2), t-butyl hydroperoxide (TBHP), m-chloroperoxybenzoic acid (mCPBA), hypochlorous acid (HOCl), HEPES buffer solution, Whatman papers, Dulbecco's phosphate-buffered saline (DBS), Roswell Park Memorial Institute (RPMI) medium, fetal bovine serum (FBS), penicillin, streptomycin, and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyltetrazolium bromide (MTT) were purchased from Sigma-Aldrich (St. Louis, MO, USA). Ammonium acetate, acetic acid, ethanol, hydroxylamine hydrochloride, sodium hydroxide, ethyl acetate, hexane, sodium bicarbonate, dimethylformamide (DMF), dimethyl sulfoxide (DMSO), 1,4-dioxane, and potassium acetate were purchased from Daejung Chemicals (Siheungsi, Kyunggido, Republic of Korea). Sodium nitrate (NaNO3), potassium perchlorate (KClO4), sodium sulfate (Na2SO4), sodium nitrite (NaNO2), and benzoyl peroxide (BPO) were obtained from AccuStandard (New Haven, CT, USA). The MCF-7 cells were purchased from the Korean Cell Line Bank (Seoul, Republic of Korea). All reagents were used as received without further purification.
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5

Synthesis and Purification of Organometallic Compounds

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DMSO (anhydrous, ≥99.9%), tetrabutyl ammonium bromide (TBAB), [(2,2-dimethyl-6,6,7,7,8,8,8-heptafluoro-3,5-octanedionato) silver(I)], dibenzo-18-crown-6 ether and ethyl benzene were purchased from Sigma-Aldrich (St. Louis, Missouri, USA). DMSO was kept sealed in the original bottle and removed with a syringe in order to protect the solution from atmospheric moisture. Dibenzo-18-crown-6 ether and (TBAB) were kept dry in a desiccator over silica gel and used as received. Iodine, I2, (Sigma-Aldrich) was purified by sublimation before use. Potassium superoxide (Sigma-Aldrich) was kept in a desiccator and used as received. The antioxidants quercetin and chrysin, purchased from Sigma-Aldrich, and eriodictyol from Indofine Chemicals, Hillsborough, NJ, USA, were used as received.
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6

Valorization of Orange Peel Waste

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Orange peel waste was donated by Tropicana PepsiCo (Valencia from Florida Hamlin variety samples received directly from the extractor). Cellulose, mannose, xylose, arabinose, galactose, sucrose, glucose, pectin from citrus peel, galacturonic acid, isopropyl-β-D-thiogalactoside (IPTG), furfural, hydroxymethylfurfural (HMF), potassium superoxide, ampicillin sodium salt, and Luria–Bertani (LB) Broth (Lennox) were purchased from Sigma-Aldrich. Fructose was obtained from Spectrum Chemical. In all experiments, ultra-pure milli-Q water (MQ) was purified to 18 MΩ·cm. Solvents used included tetrahydrofuran (THF), methanol, acetone, and chloroform which were purchased from Sigma-Aldrich. All reagents were reagent grade and used without any further purification unless otherwise specified.
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