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Ab1543

Manufactured by Merck Group
Sourced in United States

The AB1543 is a laboratory instrument designed for various scientific applications. It is an automated system that can perform a range of analytical tasks with precision and efficiency. The core function of the AB1543 is to facilitate data collection and analysis, providing researchers with valuable insights. For detailed information on the intended use and capabilities of this product, please consult the technical specifications or speak with a Merck Group sales representative.

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9 protocols using ab1543

1

Western Blot Analysis of Synaptic Proteins

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Equal amounts of protein from cultures were subjected to 10% SDS-polyacrylamide gels and transferred to PDVF membranes (Millipore). The blots were blocked with 5% nonfat dry milk or 3% bovine serum albumin (BSA) for 1 h at room temperature followed by incubation with various primary antibodies, including GluA2 (1:500, MAB397, Chemicon), GluN1 (1:500, MAB363, Chemicon), GluN2B (1:500, MAB5220, Chemicon), rabbit anti-GABAA α1 receptor (1:500, AGA001, Alomone Labs), synapsin 1 (1:10000, AB1543, Chemicon), GAPDH (1:10000, AB2302, Millipore), and anti-Phospho-Tyr1472 NMDA GluN2B-Subunit (1:500, AB5403, Chemicon). After incubation with horseradish peroxidase-conjugated secondary antibodies (Amersham Biosciences), the blots were exposed to the enhanced chemiluminescence substrate (Amersham Biosciences). Quantitation was obtained from densitometric measurements of immunoreactive bands on films with Image J software.
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2

Immunocytochemical Staining of Neuronal Receptors

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After nicotine treatment, neurons in culture were fixed with 2% paraformaldehyde in PBS with 4% sucrose (RT, 10 min), or with 100% methanol (−20°C, 5 min) and washed 3 times with PBS. For total protein staining, neurons were permeabilized with 0.1% Triton X-100 in PBS for 10 min. For surface protein staining, neurons were not permeabilized. Neurons were incubated with 5% BSA for 1 h to block nonspecific staining. Next, neurons were incubated with primary antibodies at 4°C overnight, including GluA2 (1:200, MAB397, Chemicon), GluN1 (1:200, MAB363, Chemicon), GluN2B (1:200, MAB5220, Chemicon), or synapsin 1 (1:800, AB1543, Chemicon) overnight at 4°C. Neurons were then rinsed in PBS three times and exposed to Alexa-conjugated fluorescent secondary antibodies for 2 h (Molecular Probes, 1:1000) at room temperature. After washing in PBS three times, the coverslips were mounted on slides with VECTASHIELD mounting media (Vector Laboratories, Burlingame, CA).
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3

Notch Signaling Pathway Antibody Panel

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Following antibodies were used: Notch1 (EP1238Y, NOVUS), intracellular domain of Notch1 (C-20, Santa Cruz), extracellular domain of Notch1 (#07-218, Upstate Biotechnology), Jagged1 (C-20, Santa Cruz), Delta-like1/4 (C-20, Santa Cruz), cleaved Notch1 (V1744) (#2412, Cell signaling technology), synaptophysin 1 (MAB5258, Chemicon), VGLUT1 (#135303, Synaptic Systems), VGAT (#131002, Synaptic Systems), Cre recombinase (#18771, IBL), GFP (A6455, Invitrogen), synapsin1 (#AB1543 Chemicon) and β-III-tubulin (TUJ1, SIGMA). Antibodies against synaptotagmin 160 (link) were gift from Dr. Masami Takahashi (Kitasato University). The monoclonal antibodies against Notch2 (C651.6DbHN) and SV2 were obtained from the Developmental Studies Hybridoma Bank developed under the auspices of the NICHD and maintained by The University of Iowa, Department of Biology, Iowa City, IA 52242.
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4

Protein Expression Analysis in Cellular Fractions

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Tissue samples were lysed with RIPA containing the protease inhibitor PMSF and cocktail, on ice water and centrifuged at 12,000g for 10 min. The supernatant was collected, boiled, and the proteins were separated by SDS-PAGE and transferred to the nitrocellulose membrane. The membrane was blocked with 5% skimmed milk powder, the protein was labeled overnight with primary antibody at 4 °C. After 3 times wash with washing buffer, the second antibody was incubated at room temperature for 1 h followed by another 3 washes. The Odyssey system was used to observe the protein expression level. The primary antibodies used for Western blotting include: NR2A (1:1000; ab14596, Abcam, UK), NR2B (1:1000; SAB4300711; Millipore, USA), GluA1 (1:1000; 04-855, Millipore, USA), GluA2 (1:1000; MAB397, Millipore, USA), PSD95 (1:1000; 2507, Cell Signaling Technology, USA), Synapsin 1 (1:1000; AB1543, Millipore, USA), Synaptophysin (1:1000, s-5768,Sigma), Actin (1:1000; ab6276, Abcam), LaminB1 (1:1000; Abcam), NF-κB p65 (1:500; Cell Signaling Technology, USA).
The nuclear and cytoplasmic protein preparation kit (P1200, Pulilai) was used to separate the nuclear and cytoplasmic components according to the manufacturer’s procedures for subsequent experiments.
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5

Quantifying Synaptic Proteins via Western Blot

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Western blot analysis was performed as previously described in detail.19 Briefly, peri‐infarct cortex tissue was rapidly dissected around the stroke infarct core over the ice box as shown in Figure S2.9 The equivalent region of cortex was taken in sham mice. The primary antibodies were as follows: Rabbit anti‐HDAC2 (1:2000, ab32117, Abcam), rabbit anti‐HDAC3 (1:2000, ab16047, Abcam), rabbit anti‐histone H4 (1:500, ab10158, Abcam), rabbit anti‐acetylated histone H4 (acetyl‐K5) (1:1000, ab51997, Abcam), mouse anti‐Flag (1:1000, F1804, Sigma), rabbit anti‐synapsin (1:1000, AB1543, Millipore), rabbit anti‐spinophilin (1:2000, 06‐852, Millipore), or rabbit anti PSD‐95 (1:1000, 2507, CST). Mouse anti‐GAPDH (1:4000, KC‐5G4, KangChen Bio‐tech) or mouse anti‐β‐actin (1:4000, A1978, Sigma) was used as internal control. Appropriate horseradish peroxidase–linked secondary antibodies were used for detection by enhanced chemiluminescence (Pierce).
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6

Immunostaining of Neuronal Cell Markers

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Cells were fixed with 4% formaldehyde for 10 minutes at room temperature, washed with PBS containing 0.1% Triton X-100 (PBST), blocked with 5% normal serum (Jackson ImmunoResearch, West Grove, PA, USA) in PBST for 30 minutes, incubated with primary antibody for 2 hours at room temperature, washed with PBST three times, incubated with secondary antibody for 1 hour at room temperature, washed with PBST three times, incubated with 4′6-diamidino-2-phenylindole to stain the nuclei for 5 minutes at room temperature, and washed with PBST three times. The stained cells were observed and imaged under a ZEISS (Carl Zeiss, Jena, Germany) Axio Observer Z1inverted microscope. The antibodies used were rabbit anti-TUJ1 (802001; BioLegend, San Diego, CA, USA), mouse anti-BRN3A (MAB1585; Millipore, Merck Millipore, Billerica, MA, USA), rabbit anti-NGN1 (ab66498; Abcam), chicken anti-GFP (ab13970; Abcam), rabbit anti-SYNAPSIN I (AB1543; Millipore), rabbit anti-vGLUT1 (135302; Synaptic System, Göttingen, Germany), rabbit anti-RECOVERIN (AB5585; Millipore), sheep anti-CHX10 (AB9014; Millipore), mouse HPC-1 (S0664; Sigma-Aldrich), rabbit anti-RBPMS (1830; PhosphoSolutions, Aurora, CO, USA), rabbit anti-NF200 (N4142; Sigma-Aldrich), and Alexa 488– or Alexa 568–conjugated secondary antibodies (Thermo Fisher).
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7

Immunohistochemical Staining of Hippocampal Sections

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Free-floating hippocampal sections were washed 3×5 min in 0.01 M TBS, pre-incubated with 3% BSA, 0.1% Triton X-100 in 0.01 M TBS (blocking buffer) for 1 h and incubated with primary antibodies mouse anti-Aβ1 - 16 (1 : 2000, 6e10, BioLegend), rabbit anti-BACE-1 (1 : 200, #5606, Cell Signaling), rat anti-CD68 (1 : 1000, #MCA1957GA, Bio-Rad), mouse anti-GFAP (1 : 10000, #G3893, Sigma), rat anti-lipocalin-2 (Lcn-2) (1 : 100, #70287, Abcam), and/or rabbit anti-synapsin-1 (1 : 1000, #AB1543, Millipore) at 4°C for 24 h. The next day, sections were rinsed 6×5 min in 0.01 M TBS and incubated with Alexa Fluor-conjugated secondary antibodies (AF488-conjugated donkey anti-rabbit, 1 : 500, #A21206; AF555-conjugated donkey anti-mouse, 1 : 500, #A32773 and/or AF488-conjugated donkey anti-rat, 1 : 500, #A21208, Invitrogen) for 2 h at room temperature in the dark. Then, sections were rinsed 3×5 min in 0.01 M TBS, mounted onto Menzel Superfrost glass microscope slides (Thermo Scientific) and coverslipped using Mowiol (Sigma) as mounting medium. Fluorescent images were obtained using the Leica DMI6000 B microscope (Leica Microsystems) at a 200xmagnification.
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8

Immunofluorescence Labeling of Neuronal Markers

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Neurons were fixed by 4% paraformaldehyde (Wako) for 1 h, permeabilized with 0.5% TritonX100 (Alfa Aesar, Lancashire, UK) for 6 min, and incubated in 1% bovine serum albumin (BSA, Sigma) for 1 h. The fixed cells were treated with mouse monoclonal anti-Tau-1 (axon marker, 1:1000, MAB3420, Millipore, Burlington, MA, USA), rabbit polyclonal anti-microtubule-associated protein 2 (MAP2, dendrite marker, 1:1000, AB1543, Millipore), guinea pig polyclonal anti-vesicular glutamate transporter 1 (vGlut-1, pre-synapse marker, 1:1000, AB5905, Millipore), or mouse monoclonal anti-PSD95 (post-synapse marker, 1:1000, ab2723, Abcam) primary antibody at 4 °C overnight. The neurons were then reacted with anti-mouse IgG-AlexaFluor488 (A11001, Invitrogen) or anti-rabbit IgG-AlexaFluor568 (A11011, Invitrogen) or anti-rabbit IgG-AlexaFluor647 (A-21245, Invitrogen) or anti-Guinea Pig IgG-AlexaFluor488 (A-11073, Invitrogen) for 1 h at room temperature.
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9

Antibody Characterization for Neuroscience

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Antibodies to α-adducin (1:1,000, H-100, Santa Cruz), phospho-Ser436-adducin (1:1,000, Ser436, Santa Cruz), α2-Na/K ATPase (1:1,000, A-16, Santa Cruz), α2-Na/K ATPase (1:5,000, a5, Developmental Studies Hybridoma Bank), α2-Na/K ATPase (1:1,000, ATP1A2, Thermo Fisher Scientific), Islet-1 (1:1,000, 39.4D5, Developmental Studies Hybridoma Bank), MAP2 (1:1,000, ab5622, Fisher), GFAP (1:1,000, AB5804, Millipore), Iba-1 (019-19741, WACO), 14-3-3β (1:2,000, H-8, Santa Cruz), ERK (1:2,000, Molecular Probes), superoxide dismutase (1:1,000, SD-G6, SIGMA), ERK (4685, Cell Signaling), GFP (1:1,000, Molecular Probes) and synapsin (1:500, AB1543, Millipore) were purchased.
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