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15 protocols using goat anti sox10

1

Multimarker Immunofluorescence Staining of Embryonic Tissue

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Embryos were fixed in 4% paraformaldehyde for 2 h or overnight at 4 °C, cryopreserved in 20% sucrose, and embedded in OCT compound for cryosectioning. Sections were blocked in 10% Dako serum-free blocking reagent or 10% goat serum in PBS 0.1% TritonX-100 (with some exceptions, see below), followed by incubation in primary antibody for 2 h at room temperature or overnight at 4 °C. Fluorescent Alexafluor-conjugated secondary antibodies were incubated for 1 h at room temperature. Sections were mounted in Prolong Diamond antifade with 4′,6-diamidino-2-phenylindole (DAPI). The following primary antibodies were used: Chicken anti-EGFP, 1:1000 (Abcam ab13970); mouse anti-Tuj1, 1:750 (Sigma-Aldrich T5076); goat anti-Sox10, 1:100 (Santa Cruz sc-17342); goat anti-Sox10, 1:100 (R&D Systems AF2864); mouse anti-Isl1, 1:50 (DSHB 40.3A4); rabbit anti-cleaved Caspase-3, 1:500 (Cell Signaling Technologies 9661); rabbit anti-FABP7, 1:200 (Cell Signaling Technologies 13347); goat anti-TrkA, 1:50 (R&D Systems AF1056); goat anti-TrkB, 1:200 (R&D Systems AF1494); goat anti-TrkC, 1:200 (R&D Systems AF1404); mouse anti-AP2α, 1:20, goat serum block (DSHB 3B5); sheep anti-DLL1, 1:200 (R&D Systems AF5026); rabbit anti-p75, 1:250 (Abcam 52987); goat anti-Jag1, 1:200 (R&D Systems AF599); rabbit anti-N1ICD, 1:100 (Cell Signaling Technologies 4147); sheep anti-Notch1, 1:200 (R&D Systems AF5267).
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2

Embryonic Tissue Immunolabeling Protocol

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E10.5 embryos were prepared for cryomicrotmy and antibody labeling as described previously (30 (link)). Primary antibodies include mouse anti-βIII Tubulin (TuJ1; Covance, 1:1000), rabbit anti-Six1 (Proteintech, 1:1500), chicken anti-GFP (Abcam1:1000), mouse anti-NeuN (Merck Millipore, 1:1000), mouse anti-HuC/D (16A11, Life Technologies, 1:1000), Mouse anti-BrdU (BD Biosciences, 1:100),goat anti-Sox10 (Santa Cruz Biotechnology, 1:50), mouse anti-Foxd3 (Thermo Scientific, 1:400), rabbit anti-Six4 (Proteintech Group, 1:100), mouse anti-Six1 (Atlas Antibodies, 1:200), mouse anti-Brn3a (Millipore, 1:100), mouse anti-p75 (Chemicon, 1:1000), rabbit anti-TrkA (Santa Cruz Biotechnology, 1:100), rabbit anti-TrkB (Santa Cruz Biotechnology, 1:100) and rabbit anti-cleaved Caspase 3 (Cell Signalling, 1:200). Primary antibody labeling was visualized with Alexafluor 488-, 546-, or 647- conjugated secondary antibodies (Molecular Probes, 1:2000 for 546 and 647, and 1:4000 for 488). Images were collected using a Leica Tiling microscope, or a Zeiss 710 confocal microscope.
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3

Immunostaining of Cochlear Structures

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Induced Immunostaining was performed on cochlear cross sections and cells in culture. Cochleae or cells were washed with PBS and fixed with 4% paraformaldehyde for 30 min to 2 h at room temperature. After washing three times with PBS, cochleae were cryopreserved in OCT compound (Sakura), sectioned and mounted on glass slides (Fisher). Cochlear cross sections or fixed cells were permeabilized and blocked in a solution of PBS containing 10% donkey serum and 0.5% TritonX-100 (Sigma) for 30 min at room temperature. Samples were incubated in the primary antibodies diluted in PBS containing 10% donkey serum and 0.5% TritonX-100 (Sigma) overnight at 4°C. The following day, samples were washed three times with PBS and incubated in the secondary antibody solution for 1 h at room temperature. Samples were washed three times with PBS, mounted on glass slides and imaged using a confocal microscope SP5 (Leica). The following antibodies were used: mouse anti-MAP2 (Sigma, 1:300), rabbit anti-TuJ1 (for βIII-tubulin) (Sigma, 1:1000), rabbit anti-VGLUT1 (Synaptic systems, 1:5000), goat anti-hProx1 (R&D, 1:250), and goat anti-Sox10 (Santa Cruz, 1:200).
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4

Immunolabeling of Intestinal Tissues

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For embryonic tissues, freshly dissected intestines were fixed 1 hour at RT with 4% PFA in PBS. Alternatively, whole embryos were fixed overnight at 4°C and the intestines dissected afterwards. For adult tissues, whole intestines were fixed in 4% PFA overnight at 4°C, cut longitudinally along the mesentery and washed in PBS. The outermost muscle layers were then stripped from the mucosa/submucosa. Fixed tissues were dehydrated in methanol. After rehydration, the intestines were incubated 2 hours at RT in blocking solution (10% fetal bovine serum, 0.1% Triton-X100 in PBS). Tissues were incubated with primary antibodies overnight at 4°C. The antibodies used were: mouse anti-βIII-Tubulin (1:200; Abcam ab78078), rabbit anti-S100β (1:500; Dako Z0311), goat anti-Sox10 (1:100, Santa Cruz Biotech. sc-17342) and rabbit anti-Ki67 (1:1000; Abcam ab15580). Secondary antibodies Alexa Fluor 594- or Alexa Fluor 647-conjugated anti-goat, -mouse or -rabbit (1:500, Jackson Immunoresearch) were incubated for 2 hours at RT and counterstained with DAPI. All antibodies were diluted with blocking solution. For the TUNEL assay, tissues were permeabilized 20 min at 37°C in 0.3% Triton-X100, 0.1% sodium citrate in PBS 1x, then stained in a 1:9 mix of enzyme solution:label solution from the in situ cell death detection kit, TMR red (Roche Applied Science 12156792910) 1h at 37°C.
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5

Cerebellar Slice Immunohistochemistry Protocol

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After treatment, cerebellar slices were rinsed twice with PBS and fixed in 4% paraformaldehyde in PBS for 20 min at room temperature. For immunohistochemistry, slices were rinsed in PBS and permeabilized in 1.5% or 10% (myelin proteins) Triton X-100 in PBS for 20 min. Slices were rinsed, blocked with 5% normal donkey serum (NDS) in PBS with 0.3% Triton X-100 for 1 h, and incubated with primary antibodies overnight at room temperature. Following 3 washes in PBS, Alexa Fluor-labeled secondary antibodies (Jackson ImmunoResearch, West Grove, PA) were applied (1:800) overnight at room temperature, washed 3 times in PBS and mounted in Fluoromount G (Southern Biotech, Birmingham, AL). The following primary antibodies were used: goat anti-Sox10 (Santa Cruz), rat anti-PLP (Yamamura, Konola, Wekerle, & Lees, 1991 (link)), mouse anti-AQP4 (Santa Cruz Biotechnology, Dallas, TX), rabbit anti-S100b (Sigma), rabbit anti-GST-pi (Enzo), mouse anti-Caspr (NeuroMAB), mouse anti-CC1 (Calbiochem), rabbit anti-GFAP (Sigma), rabbit anti-MOG (Abcam, Cambridge, United Kingdom), mouse anti-MBP (Covance, Princeton, NJ), chicken anti- Neurofilament-H (Neuromics, Minneapolis, MN), goat anti-Iba1 (Abcam).
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6

Immunofluorescence Staining of Vibratome Sections

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Free-floating vibratome sections were blocked with 10% donkey serum and 0.2% Triton-X in 1X PBS for 2 h at RT. After 2 h, the blocking solution was removed and sections were incubated with primary antibodies in 10% donkey serum in 1X PBS for 1 h at RT, and then washed at RT with 1X PBS three times for 5 min each. After washing, sections were incubated with secondary antibodies in 10% donkey serum in 1X PBS for 1 h at RT, and then washed again with 1X PBS three times for 5 min each. Sections were mounted on slides with ProLong Diamond Antifade Mountant (Invitrogen). Images were captured using a LSM780 Zeiss laser-scanning confocal microscope. Antibodies used for immunostaining were as follows: rabbit anti-Olig2 (1:500; Millipore, RRID:AB_2299035), goat anti-Sox10 (1:200; Santa Cruz, RRID:AB_22553119), rat anti-PDGFRα (1:500; BD Pharmingen; RRID:AB_397117), mouse anti-CC1 (1:500; Millipore, RRID:AB_2057371), chicken antβ-gal (1:2000; Abcam; RRID:AB_307210), mouse anti-Ki67 (1:250; BD Pharmingen; RRID:AB_393778). Donkey secondary antibodies conjugated to Alexa Fluor 488, Rhodamine Red-X, or Alexa Fluor 647 were purchased from Jackson ImmunoResearch and used at 1:500.
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7

Immunostaining of cell lines

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Cell lines were fixed with 4% paraformaldehyde in PBS, and stained as above, however secondary antibodies were fluorescently conjugated (Jackson Immunoresearch, West Grove, PA). The following primary antibodies were used for immunohistochemistry and/or immunofluorescent staining: goat anti-MBP (Santa Cruz Biotechnology), mouse anti-PLP (Millipore, Billerica, MA), rabbit anti-Nrf2 (Santa Cruz Biotechnology), rat anti-HO-1 (R&D Systems, Minneapolis, MN), mouse anti-SHP-1 (R&D Systems), rabbit anti-Olig2 (Millipore) and goat-anti SOX10 (Santa Cruz Biotechnology).
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8

Transcription and Protein Expression Analysis

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Simple or double in situ hybridization and immunofluorescent staining were performed on transverse sections as previously reported (Touahri et al., 2012; Ventéo et al., 2012). Digoxigenin‐ or Fluorescein‐labeled antisens RNA probes for sulf2, aldh1L1, fgfr3, sox10, and tenascin‐C were synthesized using DIG‐ or Fluorescein‐labelling kit (Roche) according to the manufacturer's instructions and revealed using either NBT/BCIP (Roche), INT/BCIP (Roche) or Alexa‐fluor 488 Tyramide (Molecular Probes). Antibodies used in this study were as follows: goat anti‐AldoC (Santa Cruz Biotechnology), rabbit and mouse anti‐GFAP (DAKO), rabbit anti‐NFIA (Active Motif), rabbit and goat anti‐Olig2 (Millipore and R&D Systems), goat anti‐Olig1 (R&D Systems), goat anti‐Sox10 (Santa Cruz Biotechnology), rat anti‐PDGFRα (BD Pharmingen), rabbit anti‐Zeb1 (Novus), mouse anti‐Nkx6.1 (Hybridoma Bank), mouse anti‐Cx43 (BD Biosciences) and rabbit anti‐Cx30 (Thermo Fisher Scientific). Alexa Fluor‐594‐ or Alexa Fluor‐488 or Alexa Fluor‐647‐conjugated secondary antibodies (Thermo Fisher Scientific) were used.
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9

Immunofluorescence Analysis of Skin Tissue

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Immunofluorescence was performed as published (Rabbani et al., 2011 (link)). Briefly, skin tissues were embedded in paraffin and cut into 6um sections. Tissue sections were incubated with primary antibodies listed below for 2 hours at room temperature or overnight at 4°C, followed by incubation with Alexa 488/594-conjugated secondary antibodies (1:200; Invitrogen, Carlsbad) for 1 hr at room temperature. Sections were counterstained with 4′,6-diamidino-2-phenylindole (DAPI, Vector Laboratories, Burlingame). The primary antibodies used were: mouse anti-β-catenin (1:400, Sigma-Aldrich, c7207), mouse anti-MITF (1:100, Vector Laboratories, VP-M650) (used in Figure 34), mouse anti-MITF (1:100, Abcam, ab12039) (used in Figure 1), goat anti-sox10 (1:100, Santa Cruz Biotechnology, sc-17342), goat anti-Dct (1:100, Santa Cruz Biotechnology, sc-10451), rabbit anti-S100 (1:100, DAKO, Z0311) and rabbit anti-Tcf1 (1:100, Cell Signaling Technology, C63D9). Images were taken with an inversed Eclipse Ti microscope (Nikon, Japan) or an upright Axioplan microscope (Zeiss, Germany).
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10

Immunofluorescence Staining of Neural Markers

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Cells or gut explants were fixed in PBS containing 4% PFA for 15 min, permeabilized for 5 min in PBS containing 0.25% TritonX-100 and incubated in PBS containing 10% BSA and 0.01% sodium azide for 30 min at RT. The cells were then incubated with the following primary antibodies diluted in PBS containing 3% BSA and 0.01% sodium azide: goat anti-NRP1 (1/500), mouse anti-TuJ1 (1/500), guinea-pig anti-synapsin 1 (Synaptic Systems, 1/700) or goat anti-SOX10 (Santa Cruz, 1/300) for 16 h at RT. For F-actin labeling, cells were incubated for 1 h at 37 °C with Alexa Fluor 568-phalloidin (1/10,000, Thermo Fisher). After washing, cells were incubated for 1h30 min at RT with the appropriate Alexa 488- or Cy3-conjugated secondary antibodies, and then for 5 min in DAPI 1/5,000 and mounted with ProLong Gold Antifade Reagents.
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