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10 protocols using human inflammatory cytokines multi analyte elisarray kit

1

Cytokine Profiling of Cell Models

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Dulbecco's Modified Eagle Medium (DMEM); penicillin, streptomycin (Thermo Fisher Scientific); fetal bovine serum (Euroclone); Iscove's Modified Dulbecco's Medium (IMDM) (Life Technologies); TruSeq RNA Sample Prep Kit v2 (Illumina); NucleoSpin RNA II (Macherey-Nagel); MuLV Reverse Transcriptase (Applied Biosystems); Flowcytomix Multiple Analyte Detection Kit (eBioscience); Human Inflammatory Cytokines Multi-Analyte ELISArray™ Kit (Qiagen); Human IL6 DuoSet and the Human CXCL8/IL8 Quantikine ELISA Kits (R&D Systems Inc); MMP11 ELISA kit (Emelca Bioscience); ELISA-based TransAM NFkB Family kit (Active Motif); transwell for migration assay (Costar, Corning); EGF, bFGF, IL6 and IL8 (PeproTech); anti-human Ki67 monoclonal antibody (MAb), diaminobenzidine (DAB), (Dako); anti-human vimentin (clone V9, Santa Cruz); anti-human alpha smooth muscle actin, α-SMA (clone 1A4, R&D System), anti-human Ki67 (clone MIB-1, Dako); anti-human LAMP2 (#HPA029100) and anti-human NF-κB1 (#HPA027305, Sigma-Aldrich); anti-human NF-κB p65 RelA (#8242, Cell Signalling); Tocilizumab (Roche); Matrigel (BD Biosciences); all other reagents were obtained from Sigma-Aldrich.
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2

Inflammatory Cytokine and Chemokine Quantification

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Cytokines and chemokines were measured by using the human inflammatory cytokines multianalyte ELISArray kit (Qiagen) and human common chemokines multianalyte ELISArray kit (Qiagen) according to the manufacturers' instructions, respectively. Briefly, 50 µL of medium was incubated in a 96-well plate for 1 hour at RT, followed by washing steps, incubation with detection antibodies for 1 hour, washing, incubation with avidin-horseradish peroxidase for 30 minutes, washing, development for 15 to 30 minutes, termination of the development with stop solution, and colorimetric quantitation of cytokines or chemokines by determination of the optical density at 450 nm.
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3

Quantifying Cytokine Secretion in Cell Culture

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IL-8 detection in CM was performed by western blot analysis. CM was obtained by incubating cells in serum-free medium for 24h. After concentration by centrifugation at 4000 r.p.m. using AgilentSpin Concentrators (Agilent Technologies Inc.,Wilmington, DE, USA), the CM was normalized to cells number, and processed for Western blot analysis.
IL-6 detection was performed by ELISA using the Human Inflammatory Cytokines Multi-Analyte ELISArray Kit (QIAGEN, Hilden, Germany) following manufacturer's instructions. CM was obtained by incubating cells in complete medium for 24h.
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4

Profiling Cytokines in Tumor-Bearing Mouse Bone Marrow

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Bone marrow extracellular fluid was obtained by flushing femur and tibia of tumor-bearing mice with 500 μL ice-cold phosphate-buffered saline containing protease inhibitor cocktail (P8340, Sigma-Aldrich, St. Louis, MO), and the supernatant was harvested by centrifugation at 400 g for 5 min. Cytokine levels in the marrow fluids were analyzed by antibody sandwich enzyme-linked immunosorbent assay (Human Inflammatory Cytokines Multi-Analyte ELISArray Kit, MEH004A, QIAGEN, Valencia, CA), according to the manufacturer's protocol. The marrow fluids obtained from non-tumor bearing mice were used as controls. Cytokine levels were normalized to total protein.
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5

Validating TGF-β1 Quantification Methods

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QFM measurements of TGF-β1 were validated by comparing results with ELISA and qPCR measurements of muscle homogenates from PAD-II and CTRL patients (N = 13 in each group). TGF-β1 protein expression was measured as part of a customized Human Inflammatory Cytokines Multi-Analyte ELISArray Kit (Qiagen, Valencia, CA, USA).
To measure TGF-β1 gene transcripts in skeletal muscle biopsies, RNA extraction, reverse transcription reactions, and qPCR were performed as previously described [40 (link), 42 (link)] and levels were normalized to myosin gene transcripts. Intrasession reliability was determined by comparing the TGF-β1 measurement of each slide from the mean of its duplicate pair. Intersession reliability was determined from the averages of patient biopsy specimens, analyzed a second time in the next analytical session. Detailed methodologies and validation results can be found in “Additional file 1”.
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6

ELISA Profiling of Chemokines and Cytokines

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ELISA experiments were performed using Human Common Chemokines Multi‐Analyte ELISArray Kit (Qiagen MEH‐009A) and Human Inflammatory Cytokines Multi‐Analyte ELISArray™ Kit (Qiagen MEH‐004A), respectively, according to manufacturer protocol. Conditioned media were collected from EpCAM−/CD133− control and 100 nm Dox‐treated EpCAM−/CD133− cells on day 6. Briefly, after centrifugation at 1200 rpm for 5 min, 50 µl of conditioned media was added to each well of the array. Results were normalized with negative and positive controls supplied by the kit. Well absorbance was measured at 450 nm as well as at 570 nm to normalize for optical imperfections using a microplate reader (Thermo Scientific Multiskan Go, USA).
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7

Quantifying Pro-Inflammatory Cytokine Levels

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Levels of pro-inflammatory cytokines were quantified with Human Inflammatory Cytokines Multi-Analyte ELISArray kit (Qiagen, Valencia, CA) in accordance with manufacturer’s instructions.
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8

Comprehensive Cytokine and Chemokine Analysis

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Cytokines and chemokines were measured using the Human Inflammatory Cytokines Multi-Analyte ELISArray kit (Qiagen) and the Human Common Chemokines Multi-Analyte ELISArray Kit (Qiagen) according to the manufacturer's instructions. Briefly, 50 μL of medium was incubated in a 96-well plate for 1 h at room temperature. This was followed by several washing and incubation steps as follows: incubation with detection antibodies for 1 h; wash; incubation with avidin-horse radish peroxidase for 30 min; wash; color development for 15–30 min; development termination using stop solution; and colorimetric quantitation of cytokines or chemokines by reading the optical density at 450 nm. In addition, the concentration of DEFB131 was measured using a DEFB131 ELISA Kit (Uscn Life Science Inc., Wuhan, China) according to the manufacturer’s instructions. Serial dilutions of recombinant peptide provided by the kit were used for generating standard curves. The optical density of the wells was determined using a microplate reader (TECAN System Inc., Männedorf, Switzerland) set to 450 nm.
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9

Quantifying Inflammatory Cytokine Profiles

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The enzyme-linked immunosorbent assay (ELISA) was used to detect IL-8 in the tissue extracts as well as in the culture medium (Human IL-8 CytoSet, Thermo Fisher Scientific Inc., Rockford, IL, USA). The assay was run according to the manufacturer’s instructions. For the determination of other inflammatory cytokines (IFN-γ, TNF-α, GM-CFS, IL-1α, IL-1β, IL-2, IL-4, IL-6, IL-8, IL-10, IL-12 and IL-17A), the protein extracts from three donors were pooled, diluted 2-fold and analyzed using a Human Inflammatory Cytokines Multi-Analyte ELISArray Kit (Qiagen, Hilden, Germany).
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10

Quantifying Inflammatory Cytokine Levels

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Supernatants were obtained from MSC culture as well as MSC–T-cell co-cultures.
IL-6, TNF-α, and IL-4 levels were measured using a commercially available Human Inflammatory Cytokines Multi-Analyte ELISArray Kit (Qiagen, QIAGEN S.p.A., Italy) according to the manufacturer’s instructions. Briefly, a microplate was coated with monoclonal antibodies that were specific to the cytokines. Standards and supernatants were pipetted into the wells of the microplate. A positive control was obtained by pipetting only the standard into the wells. A negative control was obtained by pipetting the standard and cell culture supernatants into non-coated wells. After the plate was washed, enzyme-linked polyclonal antibodies specific for IL-6, TNF-α, and IL-4 were added to the wells. The reaction was revealed by the addition of the substrate solution. The optical density was measured at a wavelength of 450 nm by using the Tecan Infinite M200 (Tecan, Switzerland) spectrophotometer. Cytokines concentrations (pg/mL) were determined against a standard concentration curve. All samples were run in duplicate.
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