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2 protocols using cf660c

1

Immunostaining Placenta and Yolk Sac

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Paraffin-embedded 14.5 d.p.c. placenta and yolk sac sections were de-paraffinized in xylene and 100%, 95%, 80%, 70% and 50% ethanol for 3 min each and rinsed with running cold water. Antigens were retrieved in sodium citrate buffer (10 mM sodium citrate, 0.05% Tween-20, pH 6.0) by microwaving for 15 min, followed by rinsing with tap water. The slides were then washed in PBS/0.025% Triton X-100 (PBST) twice for 5 min each, blocked in PBST/1.0% BSA/5.0% donkey serum for 1 h at room temperature, briefly rinsed with PBST and incubated with anti-mCherry, anti-GFP antibody (Abcam) at 4 °C overnight. The slides were washed with PBST three times for 15 min each, blocked for at least 15 min, incubated with Alexa Fluor (Life Technologies) or CF660C- (Biotium) conjugated secondary antibody for 1 h at room temperature, washed with PBST three times for 15 min each. The sections were mounted in a small drop of Vectashield with DAPI, covered with a coverslip and sealed with nail varnish. The sections were observed and imaged with a fluorescence microscope. For mCherry and Tfap2c co-staining, to reduce autofluorescence, slides were irradiated with ultraviolet light for 2 h before de-paraffining, and treated with Sudan Black for 20 min after blocking. Antibodies used are listed in Supplementary Table 7. The technical details of reducing background staining have been published33.
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2

Conjugation of Fluorescent Dyes with BG-NH2

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Benzylguanine-conjugated Alexa Fluor 647 (#S9136S) and benzylguanine-conjugated Dyomics 649P1 (#S9159S) were purchased from New England BioLabs. Alexa Fluor 647 (#A20006), Alexa Fluor 680 (#A20008) and DyLight 650 (#62265) conjugated with succinimidyl ester (NHS ester) were purchased from Thermo Scientific. Atto 647N NHS ester (#18373) and Atto 655 NHS ester (#76245) were purchased from ATTO-TEC. Cy3B NHS ester (#PA63101), Cy5 NHS ester (#PA15101), and Cy5.5 NHS ester (#PA15601) were purchased from GE Healthcare. CF633 (#92133), CF647 (#92135), CF660C (#92137), and CF660R (#92134) conjugated with NHS ester were purchased from Biotium. Dyomics 654 conjugated with NHS ester (#654-01) was purchased from Dyomics (Jena). Each dye with NHS ester was reacted with BG-NH2 (#S9148S, New England Biolabs) in anhydrous dimethylformamide (DMF, #227056, Sigma-Aldrich) at 30 °C overnight according to the manufacturer's instructions (New England Biolabs).
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