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5 protocols using mouse anti dnak

1

Western Blot Analysis of Bacterial Proteins

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Samples were subjected to SDS-PAGE and transferred to nitrocellulose or PVDF membranes. Blots were blocked for 1 h in 5% (w/v) skim milk-PBST (0.1% Tween 20 in PBS) and then incubated with the primary antibody diluted in 5% skim milk-PBST for 1 h at room temperature. The optimal dilution for each antibody was calibrated individually. The secondary antibodies were diluted in 5% skim milk-PBST, incubated with the blots for 1 h at room temperature and detected with ECL reagents. The following commercial antibodies were used: mouse anti-DnaK (Abcam), mouse anti-JNK (BD Pharmingen), and mouse anti-actin (MPBio). Antibodies directed against T3SS components were a generous gift from Prof. B. Brett Finlay (University of British Columbia, Canada) and included mouse anti-EspA, mouse anti-EspB, rat anti-EscJ, mouse anti-Tir, and rabbit anti-SigD. Secondary antibodies were HRP-goat anti-mouse (Abcam) and HRP-goat anti-rat (Jackson ImmunoResearch).
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2

AmpC β-Lactamase Activity Assay

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Bacterial culture and total protein preparation as described “AmpC β-lactamase activity assay” and 30 μg total protein was taken for carrying out western blot assay. For CFZ and IMP treatment assays, the reagents were employed at the sub-culture stage. Western blot analysis was carried out using the standard methodology as elaborated earlier [36 (link)]. The detailed attributes of antibodies employed in western blot assay are as follows: rabbit anti-NagZ (preparation by ourselves), mouse anti-DnaK (Abcam, Cambridge, MA, USA), rabbit anti-AmpC (Abnova Taipei, Taiwan, China), goat anti-mouse IgG-HRP and goat anti-rabbit IgG-HRP (Santa Cruz Biotechnology, Inc., Santa Cruz, CA, USA). SPOT-CCD camera was used to take images. Software image J was employed for the quantification of the intensity of protein bands and DnaK was used as the internal control.
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3

Western Blot Analysis of Bacterial Proteins

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Samples were subjected to SDS-PAGE and transferred to nitrocellulose membrane (pore size, 0.45 µm; Bio-Rad). The membranes were blocked for 1 h with 5% (w/v) skim milk/PBST (0.1% Tween in phosphate-buffered saline), incubated with the primary antibody (diluted in 5% skim milk/PBST) for 1 h at room temperature or overnight at 4°C, washed, and then incubated with the secondary antibody (diluted in 5% skim milk/PBST) for 1 h at room temperature. Chemiluminescence was detected with EZ-ECL reagents (Biological Industries). The following primary antibodies were used: mouse anti-His (Pierce), diluted 1:2,000; rabbit anti-MBP (Thermo Fisher Scientific), diluted 1:1,000; mouse anti-DnaK (Abcam, Inc.), diluted 1:5,000; and mouse anti-actin (MPBio), diluted 1:10,000. Antibodies directed against T3SS components were a generous gift from Prof. B. Brett Finlay (University of British Columbia, Canada) and Prof. Rebekeh DeVinney (University of Calgary, Canada) and included mouse anti-Tir, rat anti-Intimin, and rat anti-Tir. Horseradish peroxidase-conjugated (HRP)-goat anti-mouse (Abcam Inc.), HRP-conjugated goat anti-rabbit (Abcam Inc.), and HRP-conjugated goat anti-rat (Jackson ImmunoResearch), diluted 1:10,000, were used as the secondary antibodies. Representative western blots of at least three independent experiments are presented in the Results section.
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4

Western Blot Analysis of Bacterial Proteins

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Samples were separated via SDS-PAGE and transferred to nitrocellulose (pore size: 0.45 μm; Amersham Protran) or PVDF (pore size: 0.45 μm; Amersham Hybond) membranes. These blots were blocked for 1 h in 5% (w/v) skim milk-PBST (0.1% Tween in phosphate-buffered saline [PBS]), incubated for 1 h with appropriate primary antibodies (diluted in 5% skim milk-PBST) at room temperature, washed, and then incubated for 1 h with appropriate secondary antibodies (diluted in 5% skim milk-PBST) at room temperature. Chemiluminescence was detected with EZ-ECL reagents (Cyanagen). The optimal dilution for each antibody was determined as follows: mouse anti-DnaK (Abcam), diluted 1:1000; mouse anti-JNK (BD Pharmingen), diluted 1:1000; and mouse anti-actin (MPBio), diluted 1:10,000. Antibodies directed against T3SS components, including mouse anti-EspB, and mouse anti-Tir, were a generous gift from Prof. B. Brett Finlay (University of British Columbia, Canada) and Prof. Rebekah Devinney (University of Calgary, Canada). Horseradish peroxidase-conjugated (HRP)-goat anti-mouse (Abcam), diluted 1:10,000, was used as the secondary antibody for these analyses. Blots representative of at least three independent experiments are presented in the results section.
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5

Western Blot Analysis of Protein Samples

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Samples were subjected to SDS-PAGE and transferred to nitrocellulose membranes (pore size, 0.45 µm; Bio-Rad) or polyvinylidene difluoride (PVDF) (Mercury; Millipore). The blots were blocked for 1 h in 5% (wt/vol) skim milk-PBST (0.1% Tween in phosphate-buffered saline), incubated with the primary antibody (diluted in 5% skim milk-PBST for 1 h at room temperature, unless indicated otherwise) and then with the secondary antibody (diluted in 5% skim milk-PBST for 1 h at room temperature), and detected with the enhanced chemiluminescence (ECL) reagents (Biological Industries). The following primary antibodies were used: mouse anti-HA (Abcam), diluted 1:1,000; rabbit anti-MBP (Thermo Fisher Scientific), diluted 1:1,000; mouse anti-DnaK (Abcam); rabbit anti-intimin, diluted 1:2,000; mouse anti-JNK (BD Pharmingen), diluted 1:1,000 in Tris-buffered saline (TBS); and mouse anti-actin (MPBio), diluted 1:10,000. The following secondary antibodies were used: horseradish peroxidase-conjugated goat anti-mouse antibody (Abcam), diluted 1:5,000, and horseradish peroxidase-conjugated goat anti-rabbit antibody (Abcam), diluted 1:5,000.
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