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9 protocols using anti b220 pe

1

Flow Cytometry Immune Cell Profiling

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Cells were resuspended in 100 μl FCB, blocked with 0.5 μl TruStainFcX (anti-mouse CD16/32 FcR block, Biolegend) for 5 min at room temperature, and stained for 30 min at 4°C with: eFluor605NC-anti-CD45 (1:500, Biolegend), FITC-anti-CD4 (1:200, eBioscience), APC-anti-CD8 (1:200, Biolegend), PE-anti-B220 (1:200, Biolegend), APC-eFluor780-anti-MFICII (1:200, eBioscience), PE-Cy7-anti-CD11b (1:200, eBioscience) and PerCP-Cy5.5-anti-Ly6G (1:200, Biolegend). Cells were then fixed in 1% PFA for 1 h. Finally, cells were resuspended in 500 μl FCB, labelled with DAPI to exclude cell debris and analyzed with a CytoFLEX S flow cytometer (Beckman-Coulter) equipped with CytExpert software (Beckman-Coulter).
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2

Multi-Parametric Flow Cytometry Panel

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Cells were resuspended in 100 μl FCB, blocked with 0.5 μl TruStainFcX (anti-mouse CD16/32 FcR block, Biolegend) for 5 min at room temperature, and stained for 30 min at 4 °C with: FITC-anti-CD45 (1:1000, Biolegend), PE-Cy7-anti-CD4 (1:200, eBioscience), PerCP-Cy5.5-anti-CD8 (1:200, Biolegend), PE-anti-B220 (1:200, Biolegend), APC-anti-MHCII (1:200, eBioscience), and APC-eFluor780-anti-CD11b (1:200, eBioscience) (Supplemental Table 1). Cells were then fixed in 1% PFA for 1 h. Finally, cells were resuspended in 500 μl FCB, labelled with DAPI to exclude cell debris, and analyzed with a CytoFLEX S flow cytometer (Beckman-Coulter) equipped with the CytExpert software (Beckman-Coulter).
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3

Flow Cytometric Analysis of Immune Cells in EAE

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Cells were resuspended in 100 ml FCB, blocked with 0.5 ml TruStainFcX (anti-mouse CD16/32 FcR block, Biolegend) for 5 min at room temperature, and stained for 30 min at 4°C with: FITC-anti-CD45 (1:1000, Biolegend), PE-Cy7-anti-CD4 (1:200, eBioscience), PerCP-Cy5.5-anti-CD8 (1:200, Biolegend), PE-anti-B220 (1:200, Biolegend), APC-anti-MHCII (1:200, eBioscience), and APC-eFluor780-anti-CD11b (1:200, eBioscience) (Supplemental Table 1). Cells were then xed in 1% PFA for 1 h. Finally, cells were resuspended in 500 ml FCB, labelled with DAPI to exclude cell debris and analyzed with a CytoFLEX S ow cytometer (Beckman-Coulter) equipped with CytExpert software (Beckman-Coulter).
Quanti cation of IC100 in Tissues. IC100 was quanti ed in brain, spinal cord, liver and spleen at 35 days post-induction (dpi) of EAE using a proprietary assay developed by In amaCORE, LLC using Meso Scale Technology. Protein lysates were obtained as described in [29] . The assay was read using the QuickPlex SQ 120 instrument (Meso Scale Diagnostics, Maryland).
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4

Multiparameter Flow Cytometry Staining

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Cell staining was performed at 4°C with Fc Block (hybridoma 2.4G2) in FACS staining buffer (0.5% FBS and 0.1% NaN3 in dPBS). Anti–B220-FITC, anti–B220-PE, anti–CD21-APC, Annexin V-FITC, anti–BrdU-FITC, and Streptavidin-PE were purchased from BioLegend. Anti–CD23-biotin and anti–CD138-biotin were purchased from BD. Anti–CD69-biotin, anti–MHC-II-PE, and anti–TLR9-FITC were purchased from eBioscience. Flow data were acquired by the FACSCanto II (BD) and analyzed by FlowJo software.
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5

Multicolor Flow Cytometry of Immune Cells

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Spleens and inguinal lymph nodes were collected and single-cell suspensions were generated in IMDM 10% FCS Pen-Strep. Cells were surface stained to quantify cell populations. T cell panel: anti-CD3 Alexa 700 (BioLegend; clone 17A2), anti-CD4 PE-Cy7 (BioLegend; clone RM4-5), anti-CD8 V500 (BD Horizon, clone 53-6.7), anti-CD62L APC (BD Pharmingen; clone MEL-14), anti-CD44 Pacific Blue (clone IM7, grown in-house), anti-CXCR5 PE (BioLegend; clone J252D4), and anti-CCR7 PerCP (BioLegend; clone 4B12). B cell panel: anti-B220 PE (BioLegend; clone RA3-6B2), anti-CD38 APC (BioLegend; clone 90), anti-Fas PE-Cy7 (BioLegend; clone Jo2), anti-GL7 FITC (BioLegend; clone GL7), anti-MHCII Pacific Blue (BioLegend; clone M5/114.15.2), anti-CD19 Alexa 700 (BioLegend; clone 6D5), and anti-CD138 Percp (BioLegend; clone 281-2). CD4+ TCM were CD3+CD4+CD44highCD62high, CD4+ TEM were CD3+CD4+CD44highCD62Llow, T follicular helper cells (TFH) were CD3+CD4+CXCR5+, germinal center (GC) B cells were B220+CD19+GL7+Fas+, and plasma cells B220+CD19+CD138+CD38+.
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Multiparameter Flow Cytometry Analysis

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Single cell suspensions from the spleen, lymph node and thymus were prepared and stained after a washing step for surface marker expression with the following fluorochrome conjugated antibodies: anti-CD3-PECy7, anti-CD4-FITC, anti-CD8-APC and anti-B220-PE, (all from Biolegend). For the staining of activation markers, cells were pre-activated for 24 h with stimulating antibodies (aCD3 and aCD28) and then stained with the following antibodies: anti-CD25-APC, anti-CD44-PECy7 and anti-CD69-PE (all from Biolegend). For analyses of thymocytes the following antibodies were used: anti-CD24-FITC, anti-CD5-PerCP Cy5.5 and TCRβ-Pe Cy7 (all from Biolegend).
For the staining of intracellular FoxP3, the cells were fixed and subsequently permeabilized to the staining of surface antigens. The FoxP3 FITC staining buffer set (eBioscience) was used for the detection of Foxp3. Data were acquired on a FACSCalibur (CellQuest, BD Biosciences) and analyzed with FlowLogic software (eBioscience).
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7

Antibody and Primer Reagents for Flow Cytometry

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Antibodies for flow cytometry, anti-Kit-APC, anti-Mac-1-APC, anti-Gr-1-PE, anti-CD3-APC, and anti-B220-PE, were purchased from BioLegend and used as described [1 (link)]. The manufacturers and catalog numbers for other antibodies and reagents are as follows: anti-PirB-PE, R&D Systems, FAB2754P; pCAMKI, Santa Cruz, sc-28438; anti-pCAMKII, Abcam, ab32678; anti-pCAMKIV, Santa Cruz Biotechnology, sc-28443-R; anti-CAMKI, Abcam, ab68234; anti-CAMKII, Cell Signaling, 4436; anti-CAMKIV, Cell Signaling, 4032; anti-pCREB, Cell Signaling, 9198S; anti-CREB, Cell Signaling, 9197S; anti-actin, Sigma Aldrich, A2066; STO-609, Sigma Aldrich, S1318; KN93, Sigma Aldrich, K1385; The PCR primer sequences were as follows: hCAMKI forward: CGGAGGACA TTAGAGACA, reverse: CTCGTCATAGAAGGGAGG-3; hCAMKIV forward: GATGAAAGAGGCGATCAG, reverse: TAGGCCCTCCTCTAGTTC. PirB forward: GAG AATCACCAGACACATGC, PirB reverse: CTGCCCTCATGTCTTAACTT, mCAMKIV forward: AAGCAGGCGGAAGACATTAGG, CAMKIV reverse: AGTTTCTGAGTCCTCTTGTCCT.
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8

Multimodal Immune Profiling of AML

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We performed flow cytometry, immunohistochemistry, and cytospin as described previously [1 (link), 15 (link), 16 (link)]. For flow cytometry analysis of AML cells, peripheral blood or BM cells were stained with anti-Mac-1-APC, anti-Gr-1-PE, anti-CD3-APC, anti-B220-PE, or anti-Kit-PE monoclonal antibodies (BioLegend). For analysis of apoptosis, indicated AML cells were stained with PE-conjugated anti-annexin V and 7-AAD (BD Pharmingen) according to the manufacturer’s instructions.
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9

BTK Inhibition Phenotypic Analysis

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BTK inhibition with PF-06250112 was evaluated on splenocytes labeled with anti-CD86-FITC (BD Pharmingen, San Jose, CA, USA), and anti-B220-PE (BioLegend, San Diego, CA, USA). Phenotypic analyses were performed using anti-CD4-Alexa 700, anti-CD19-Pacific blue (Biolegend), anti-CD45-APC (eBiosciences, San Diego, CA, USA); anti-CD3e-FITC, anti-CD11b-PE (BD Pharmingen), anti-CD21-APC Cy7, anti-CD23-PE Cy7 and anti-GL7 Alexa 488 (Biolegend). Fluorescence activated cell sorting analysis was done on live cells using BD LSRII and FACSDiva software.
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