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8 protocols using dq gelatin fitc

1

In Vitro Gelatinase Activity Assay

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Suprarenal aortas from C57BL/6 J mice that had been subcutaneously infused with AngII (1000 ng/kg/min) for 7 days were excised and incubated in culture medium for 20 h. The conditioned medium was electrophoresed on SDS-PAGE gels containing 1.0 mg/mL gelatin (Sigma-Aldrich, Saint Louis, MI, USA). Gels were washed twice with 2.5% Triton X-100, incubated for 24 h (37 °C) with zymography buffer (50 mM Tris-HCl, pH 7.5, 150 mM NaCl, 10 mM CaCl2, and 0.05% sodium azide) and stained with Coomassie brilliant blue.
For in situ zymography, freshly cut frozen aortic sections (6 μm) were incubated overnight at 37 °C with the fluorogenic substrate DQ-gelatin-FITC (Molecular Probes, Eugene, Oregon, USA) dissolved in zymography buffer. The gelatin with a fluorescent tag remains caged (no fluorescence) until it is cleaved by an enzyme with gelatinase activity. The proteolytic activity of MMPs was detected as green fluorescence (530 nm) using confocal microscopy. In control sections, gelatinolytic activity was inhibited by adding the ion chelator EDTA (20 mM) to the medium.
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2

In Situ Zymography for Cardiac Gelatinase Activity

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In situ zymography with the MMP fluorogenic substrate dye-quenched-gelatin-fluorescein isothiocyanate DQ-gelatin-FITC (Molecular Probes, Eugene, OR) was performed on Optimal cutting temperature compound OCT-embedded fresh cardiac cryostat-cut sections. Ventricular sections were air-dried for 3 h at room temperature; then rehydrated in PBS; and incubated overnight at 37 °C with the quenched fluorogenic substrate DQ-gelatin-FITC (40 µg/mL) alone or in combination with 20 mM EDTA in Tris-buffered saline (TBS) containing 50 mM Tris-HCl, 150 mM NaCl, 5 mM CaCl2, 0.05% Brij L23, pH 7.6, 0.02% NaN3. After washing, sections were fixed with 2% paraformaldehyde in PBS for 5 min and nuclei were counterstained with 4′,6-diamidino-2-phenylindole DAPI (0.1 µg/mL, Sigma, Milan, Italy) for 15 min at room temperature. Mounted slides were examined by confocal microscopy (Leica TCS SP5) to detect the green fluorescence due to gelatinolytic activity. Scale bar: 50 µm.
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3

Optimized Immunohistochemistry Protocol

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Glutamate, Coomassie blue, Hoechst 33258, isolectin-B4-TRITC/FITC, phosphate-buffered saline (PBS), bovine serum albumin (BSA), plasminogen activator inhibitor 1 (PAI-1), and Triton X-100 were from Sigma-Aldrich (Saint Quentin Fallavier, France). MK801 was obtained from Tocris (R&D, Lille, France). GM6001 was provided by Millipore SAS (Molsheim, France). SDS-PAGE Tris–glycine gel (containing 0.1% gelatin as a gelatinase substrate), renaturing buffer, developing buffer, DQ-gelatin-FITC, and DQ-casein-FITC were from Invitrogen (Cergy Pontoise, France). The gelatinase inhibitor SB-3CT was from Biomol (Lonza Sales Ltd, Basel, Switzerland). Paraformaldehyde (PFA) was obtained from Labonord (Templemars, France). Characteristics of the primary antibodies against alpha-smooth muscle actin (ACTA2), CD31, calretinin, Cre recombinase, collagen IV, doublecortin (DCX), GABA, GFAP, GFP, GluN1, MMP-9, somatostatin (SST), Gad67, and β-actin are summarized in Supplementary Table 1. The secondary antibodies Alexa Fluor 488 donkey anti-rabbit IgG (A-21206), Alexa Fluor 488 goat anti-rat (A-11006), and Alexa Fluor 594 donkey anti-goat IgG (A-11058) used for immunohistochemistry were from invitrogen.
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4

In Situ Aortic Matrix Metalloproteinase Detection

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OCT-embedded, fresh abdominal aortic cryosections were analyzed with in situ zymography using the MMP fluorogenic substrate DQ-gelatin-FITC (Invitrogen). Cryosections were incubated with 40 μg/ml (in PBS) of the quenched fluorogenic substrate DQ-gelatin-FITC for 1 h at 37 °C. The gelatin with a fluorescent tag remained caged (no fluorescence) until the gelatin was cleaved by a gelatinase. The excess fluorogenic substrate was washed with PBS and photographed with a confocal microscope.
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5

Detecting Aortic MMP Activity

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Freshly OCT-embedded mouse aorta sections (7.00 um) were used to detect MMP activity. Sections were incubated in a dark and humid chamber at 37° C for 24 hr with MMP fluorogenic substrate DQ–gelatin–FITC (Invitrogen), then washed with PBS. Negative controls were incubated with PBS.
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6

In-situ Zymography of Aortic Cryosections

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OCT-embedded, fresh abdominal aortic cryosections were analyzed with in-situ zymography using the MMP fluorogenic substrate DQ-gelatin-FITC (Invitrogen). Cryosections were incubated with 40 μg/ml (in PBS) of the quenched fluorogenic substrate DQ-gelatin-FITC for 1 h at 37°C. The gelatin with a fluorescent tag remained caged (no fluorescence) until the gelatin was cleaved by a gelatinase. The excess fluorogenic substrate was washed with PBS and photographed with Nikon TS2-S-SM microscope. Quantitative analysis of fluorescence intensity was obtained with ImageJ software.
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7

Collagen and Gelatin Degradation Assay

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Glass slides were pre‐coated with DQ‐FITC‐collagen types I, IV, and DQ‐FITC‐gelatin (Life technologies) at a final concentration of 40 ng/μl for 2 h at 37°C, respectively. After washing with PBS, the slides were air dried and fixed with 2% formaldehyde. After washing with PBS, the slides coated with the DQ‐FITC‐collagen types I, IV, and DQ‐FITC‐gelatin were equilibrated with α‐MEM without serum. The iBMP2/4fx/fx and iBMP2/4ko/ko ob cells were added to the plates containing the DQ‐FITC‐collagen type I or IV or DQ‐FITC‐gelatin coated slides and cultured for 12 h, respectively. The cells were fixed with 4% formaldehyde for 15 min and washed with PBS. Then, the cells were mounted using Vectashield mounting medium (Vector Laboratories Inc., Burlingame, CA). Images were taken using a Nikon inverted fluorescent microscope coupled to cool CCD camera and NIS‐GIEMENTS software. Spots of processing collagen type I, IV, and gelatin in the two cells were quantitated.
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8

Fluorescent Collagen and Gelatin Assay

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Glass slides were pre-coated with DQ-FITC-collagen IV and DQ-FITC-gelatin (Life technologies, Grand Island, NY) at a final concentration of 40 ng/µl for 2 h at 37°C, respectively. After washing with PBS, the slides were air dried and fixed with 2% formaldehyde. After washing with PBS, the slides coated with the DQ-FITC-collagen IV and DQ-FITC-gelatin were equilibrated with a-MEM without serum. The iBmp2fx/fx and iBmp2ko/ko dp cells were added to the plates containing the DQ-FITC-collagen IV- or DQ-FITC-gelatin coated slides and cultured for 12 h, respectively. The cells were fixed with 4% formaldehyde for 15 min and washed with PBS. Then, the cells were mounted using Vectashield mounting medium (Vector Laboratories, Inc., Burlingame, CA). Images were taken using a Nikon inverted fluorescent microscope coupled to cool CCD camera and NIS-GIEMENTS software.
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