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2 protocols using cd4 pe clone rpa t4

1

Multiparameter Flow Cytometry Immunophenotyping

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Cells from animals were stained with fluorescently conjugated antibodies: CD69-Brilliant Violet 510 (clone FN50) or CD14-Brilliant Violet 510 (clone M5E2), CD3-Pacific Blue (clone Hit3a), CD8a-FITC (clone Hit8a), CD4-PE (clone RPA-T4), CD19-PE-Cy5 (clone SJ25C1), CD45-APC (clone 2D1), CD56-PE-Cy7 (clone MEM-188) (all from Biolegend) and Ghost Dye Red 780 (Tonbo Biosciences). All flow cytometry samples were run using a MACSQuant Analyzer 10 flow cytometer (Miltenyi) or Attune NxT. (Beckman Coulter). All data was analyzed using FlowJo v.10 (TreeStart, Inc) (Supplementary Fig. 10d).
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2

Characterization of T Cell Subsets by Flow Cytometry

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To determine the expression of cell surface markers, cells were blocked with human Fc receptor blocking reagent (Miltenyi Biotec) and then stained with fluorochrome-conjugated antibodies diluted in flow cytometry staining buffer (PBS containing 2% FBS). To stain for intracellular transcriptional factors, Foxp3/Transcription Factor Staining Buffer Set (Thermo Fisher Scientific) was used. The following fluorochrome-conjugated antibodies were applied: anti-CD3-eFlour450 (clone UCHT1, Thermo Fisher Scientific), CD4-PE (clone RPA-T4, Biolegend), CD4-FITC (clone RPA-T4, Thermo Fisher Scientific), T-bet-FITC (clone ebio4B10, Thermo Fisher Scientific), GATA-3-AF488 (clone TWAJ, Thermo Fisher Scientific), ROR-γT-PE (clone AFKJS-9, Thermo Fisher Scientific), Foxp3-FITC (clone 150D/E4, Thermo Fisher Scientific). For flow cytometry, we have adhered to the guidelines for the use of flow cytometry and cell sorting in immunological studies [71] . The gating strategy is shown in Supporting information Figure S8.
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