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Papain suspension

Manufactured by Merck Group
Sourced in United States

Papain suspension is a laboratory product derived from the papaya plant. It is a proteolytic enzyme used in various biochemical and cell culture applications. The core function of papain suspension is to catalyze the hydrolysis of peptide bonds in proteins.

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4 protocols using papain suspension

1

Quantifying Sulfated Glycosaminoglycans in Decellularized ECM

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Sulfated glycosaminoglycan (sGAG) was quantitatively determined using Glycosaminoglycans Assay Kit (Chondrex, Inc., Washington). sGAG were extracted from the dECM samples using papain extraction reagent. To create the papain extraction solution, 0.1M sodium acetate, 0.01M Na2ETDA (EMD Millipore Corporation, USA), and 0.005M cysteine hydrochloride were added to 0.2M sodium phosphate buffer (sodium phosphate monobasic and sodium phosphate dibasic). Once all the components were completely dissolved, papain suspension (Sigma-Aldrich, USA) was added to the extraction buffer and stored at 4°C for a maximum of 10 days. Papain extraction solution was then added to the dECM samples and incubated at 37°C for 3 h. Digested aliquots were collected from the wells and mixed with 1,9 Dimethylmethlyene (DMB) Dye Solution as per manufacturer’s instructions. The concentration of GAGs in samples were determined using the Eon plate spectrophotometer and regression analysis.
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2

Rat Tail Collagen Type I Protocol

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Rat tail high concentration collagen type I was obtained from Corning (Bedford, MA). Sodium hydroxide, fluorescein isothiocyanate-dextran of 150K MW (FITC-dextran), sodium acetate, cysteine hydrochloride, sodium phosphate monobasic, sodium phosphate dibasic, papain suspension, cytochalasin D, and (–)-blebbistatin were procured from Sigma Aldrich (St. Louis, MO). Y-27632 and Na2EDTA were purchased from EMD Millipore (Kankakee, IL). Dulbecco’s Phosphate Buffer Saline (DPBS), RPMI Medium 1640, Penicillin-Streptomycin (Pen Strep), 0.25% Trypsin-EDTA, fetal bovine serum (FBS), and collagenase Type I were acquired from Gibco by Life Technologies (Grand Island, NY). D-(–)-Ribose, Hoechst 33342, and Alexa Fluor™ 488 phalloidin were obtained from Thermofisher Scientific (Waltham, MA). AlamarBlue™ cell viability reagent was purchased from Invitrogen by Thermo Fisher Scientific (Eugene, OR). Acetone, methanol, and glacial acetic acid were acquired from Fisher Chemical (New Jersey). Endothelial cell basal medium-2 (EBM-2) and EGM-2 SingleQuots growth factors were obtained from Lonza (Walkersville, MD).
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3

Quantifying Glycosaminoglycans in Urine and Tissue

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Urine and tissue GAGs were measured with the modified DMB assay and by LC/MS-MS, as described in detail previously.9 (link) For DMB, tissue samples (10–30 mg) were incubated for 3 h, 2,000 RPM, at 65°C in papain digest solution (calcium- and magnesium-free PBS containing 1% papain suspension [Sigma], 5 mM cysteine, and 10 mM EDTA, pH 7.4) to a final concentration of 0.05 mg tissue/mL buffer. Urine samples were diluted in water accordingly in order to be within the linear range of the assay. Fifty μL of tissue extract or diluted urine were incubated with 200 μL DMB reagent (9:1 31 μM DMB stock in formiate buffer 55 nM:2 M Tris base). The samples were read on a microplate reader at 520 nm and compared with a heparan sulfate standard curve. GAGs in tissue or urine were normalized by protein and creatinine contents, respectively.
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4

Quantification of Glycosaminoglycans in Urine and Tissues

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Urine and tissue GAGs were measured with the modified dimethylmethylene blue assay (DMB)69 (link). Tissue samples (10–30 mg) were incubated for 3 h at 65 °C in papain digest solution (calcium- and magnesium-free PBS containing 1% papain suspension (Sigma), 5 mM cysteine, and 10 mM EDTA, pH 7.4) to a final concentration of 0.05 mg tissue/mL buffer. Fifty microliters of extract was incubated with 200 µL DBM reagent (9:1 31 μM DMB stock (in formiate buffer 55 nM): 2 M Tris base). The samples were read on a microplate reader at 520 nm.
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