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37 protocols using mouse anti nestin

1

Characterization of Neural Stem Cells

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Neurospheres that adhered to poly L-lysine-coated slides were used for studies of surface markers. Primary antibodies used included mouse anti-nestin (1:250, Abcam) and rabbit anti-CD133 (1:5, Miltenyi Biotec GmbH). Secondary antibodies were anti-mouse Alexa Fluor 488 and anti-rabbit Alexa Fluor 555 (Molecular Probes, Eugene, OR, USA). Images were captured by fluorescence microscope.
Neurospheres were dissociated into single cell suspensions, and then incubated with PE-conjugated nestin (1:100; Miltenyi Biotech GmbH) and APC-conjugated CD133 (1:100; Miltenyi Biotech GmbH) antibody. Mouse anti-TfR primary antibody (1:200, Invitrogen) and PE-conjugated mouse IgG (1:100, Invitrogen) were used. Labeled cells were analyzed by flow cytometry (Beckton Dickinson FACScan; BD Biosciences). Cells were collected and lysed for western blotting analysis by standard procedures. Primary antibodies of anti-TfR (1:1000) and anti-β-actin (Sigma,USA) were used.
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2

Immunofluorescence Analysis of hSCAP Markers

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1 × 104 cell/cm2 of hSCAPs were seeded on 24 well plate (Corning) and cultured for 2 days. The attached cells were fixed with 3.7% formaldehyde (Sigma) for 20 mins at room temperature, and fixed cells were washed with PBS. The cells were permeabilized with 0.2% Triton X-100 (Sigma) treatment for 20 mins, and, after brief washing with PBS, were treated with 4% bovine serum albumin (BSA: Sigma) to block non-specific binding of antibodies at 4°C for overnight. After blocking, the cells were incubated with primary antibodies such as 1:200-diluted mouse-anti-nestin (Abcam) antibody, 1:200-diluted mouse-anti-Stro-1 (Abcam) antibody, and 1:200-diluted mouse-anti-CD44 (Abcam), and 1:200-diluted mouse-anti-CD133 (Abcam) at 4°C for overnight. After reaction with primary antibodies, the cells were washed gently with PBS three times, and then incubated with secondary antibodies such as 1:2000-diluted alexa 488 (goat anti-mouse IgG, Invitrogen), 1:2000-diluted alexa 596 (goat anti-mouse IgG, Invitrogen) for 1 hr at room temperature under dark condition. Finally, after brief washing with PBS three times, the cells were counter-stained with DAPI, and mounted. The stained cells were observed under an inverted fluorescence microscope (Olympus, IX-72).
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3

Neural Stem Cell FACS Analysis

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For FACS analysis, the neurospheres were dissociated into single cell by accutase digestion. Single cell suspensions were then stained with appropriate antibodies as follows: mouse anti-nestin (1 : 50, Abcam), rat anti-CXCR4 (1 : 50, BioLegend), and rabbit anti-βIII tubulin (1 : 10, Epitomics). All flow cytometric analysis was performed using FACSCAria II (BD Biosciences) and results were analyzed by FACSDiva software (BD Biosciences).
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4

Immunocytochemical Characterization of Neural Stem Cells

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The NSCs plated in the chamber were fixed with 4% paraformaldehyde for 20 min, then washed three times with PBS. After having been permeabilized with 0.5% Triton X-100 for 15 min and blocked with 5% normal goat serum for 1 h, the chambers were sequentially incubated with respective primary antibodies overnight at 4 °C, and then DAPI (4-6-diamidino-2-phenylindole), or DyLight 488- or DyLight 555-labeled secondary antibodies (1:400, Thermo Fisher) were added for 1.5h at room temperature. Stained cells were visualized and imaged using a laser scanning confocal microscope (Olympus, Tokyo, Japan). Primary antibodies used in this study are as follows: rabbit anti-Ki67 (Abcam, Cambridge, USA, Cat# ab15580), mouse anti-Nestin (Abcam, Cat# ab6142), rabbit anti-β-tubulin III (Biolegend, San Diego, CA, USA, Cat# PRB-435P), mouse anti-MAP2 (Sigma-Aldrich, St. Louis, MO, USA, Cat# M9942), and goat anti-Sox2 (Santa Cruz Biotechnology, Dallas, TX, USA, Cat# sc-17320). The plated cells in chambers were processed for EDU staining using the Click-iT EdU Cell Proliferation Kit according to the manufacturer’s protocol. The numbers of TUJ1+, Ki67+, Edu+, and MAP2+ cells were quantified with ImageJ software.
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5

Magnetic Field-Induced Neuronal Differentiation

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ADMSCs (1 × 104 cells) were seeded onto the substrates in 48‐well plates and exposed to a rotating MF for 5, 10, and 15 days. After fixation with 4% paraformaldehyde for 10 min, the cells were permeabilized with 0.1% Triton X‐100 in PBS for 10 min, followed by washing in PBS three times. Samples were then blocked with 5% BSA for 1 h. To evaluate neuronal differentiation, antibodies against neuronal markers were used. These samples were incubated with primary antibodies at 4 °C overnight. Primary antibodies included mouse anti‐nestin (marker of NSCs), mouse anti‐Tuj1, rabbitanti‐MAP2 (neuronal specific markers), and rabbit anti‐GFAP (marker of astrocyte), respectively (Abcam). Next, the samples were washed three times with PBS and then incubated with appropriate secondary antibodies (Alexa Fluor 488 conjugated goat anti‐rabbit or Alexa Fluor 546 conjugated goat anti‐mouse IgG) for 1 h at room temperature. After washing three times in PBS, the cells were stained with DAPI (Invitrogen) for at least 10 min. Fluorescence images were acquired using a laser confocal microscope.
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6

Antibody Staining Panel for Neural Development

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Primary antibodies used included rabbit anti-Kif2a (1: 1000, Abcam), rabbit anti-Tbr2 (1:500, Abcam), rabbit anti-Pax6 (1:200, Covance), mouse anti-beta III tubulin (TU20) (1:500, Abcam), mouse anti-nestin (1:500, Abcam), mouse anti-α tubulin (1:5000, CST), rat anti-Brdu (1:500, Abcam), rabbit and chicken anti-green fluorescent protein (1:500, GFP) (Invitrogen and Aves, respectively), rabbit anti-Ki67 (1:500, Thermo), rabbit anti-PH3 (1:300, Millipore), rabbit anti-cleaved caspase3 (1:300, Cell signaling), rabbit anti-AKT (1:500, CST), rabbit anti-p-AKT (1:500, CST), rabbit anti-β-catenin (1:200, Santa Cruz), mouse anti-GSK3β (1:200, Santa Cruz), and mouse anti-p-GSK3β (1:200, Santa Cruz). All the corresponding conjugated secondary antibodies were purchased from Invitrogen. Nuclei were stained with 4′,6-diamidino-2-phenylindole (DAPI) (Roche).
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7

Immunocytochemical Analysis of Neural Markers

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Differentiated cells in alginate beads were fixed in
4% paraformaldehyde and 70% ethanol for 30 minutes.
Samples were then permeabilized with 2%
Triton X-100 (Sigma, St.Louis, MO, USA) for 30
minutes. Blocking in 1 mg/ml BSA and incubating
primary antibodies against mouse anti-NESTIN
(1:300, Abcam, Cambridge, MA, USA), mouse anti-
GFAP (1:600, Abcam, Cambridge, MA, USA) and
mouse anti-MAP2 (1:300, Abcam, Cambridge, MA,
USA) were performed overnight. The secondary antibody,
anti-mouse FITC-conjugated IgG antibody
(1:500, Abcam, Cambridge, MA, USA), was used
for 2 hours at 37˚C. For nucleus visualization, cells
were stained with diamidino-2-phenylindole (DAPI,
1:1000, Sigma, St.Louis, MO, USA). For negative
control, primary antibody was eliminated. To merge
the pictures, image J software1.42 software (Wayne
Rasband, National Institutes of Health, Bethesda,
MD, USA) was used. Hundred cells were counted per
sample.
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8

Immunocytochemistry and Mitochondrial Analysis

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Cells were grown in coated 96-well plates or chamber slides, fixed in 4% paraformaldehyde for 10 min, and permeabilized in 0.3% Triton X-100 in PBS for 10 min. Cells were then blocked with 5% BSA for at least 1 hr before incubation with chicken anti-GFP (Abcam, ab13970) 1:2000, rabbit anti-Tom20 (Santa Cruz, SC11415) 1:500, mouse anti-SSEA4 (Cell Signaling CS 4755) 1:500, mouse anti Tra-1-60 (Cell Signaling CS 4746) 1:500, mouse anti Tra-1-81 (Cell Signaling CS 4745) 1:500, rabbit anti-Pax6 (Covance, PRB-278P) 1:500, or mouse anti-Nestin (Abcam, ab6142) 1:1000 overnight at 4°C. Cells were washed 3 times with PBS, then incubated with AlexaFluor 488, AlexaFluor 555, and/or AlexaFluor 647 (Fisher) at 1:500 dilutions for 1 hr at RT. To stain nuclei, cells were incubated with 1:10000 Hoechst 33342 (Life Technologies). Cells were preserved in Prolong Gold anti-fade reagent (Life Technologies) and imaged on a fluorescence microscope (Z1 Axio Observer Apotome, Zeiss). Mitochondrial length was quantified using an ImageJ mitochondrial morphometry plugin as described previously (Dickey and Strack, 2011 (link)).
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9

Immunocytochemical Characterization of Neural Cells

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Cells were fixed in 4% paraformaldehyde (PFA) for 30 min at room temperature. After fixation, the cells were washed with PBS and permeabilized with 0.25% TritonX-100 for 25 min. Non-specific binding sites were blocked with normal goat serum (NGS) for 1 h. The dilutions of primary antibodies were as follows: mouse anti nestin 1∶500 (Abcam, UK), rabbit anti MAP2 1∶50 (Cell Signaling Technology, USA), mouse anti myelin basic protein (MBP) 1∶500 (Cell Signaling Technology, USA), rabbit anti GFAP 1∶200 (Zhongshanjinqiao, China), mouse anti BrdU 1∶200 (Zhongshanjinqiao, China). For BrdU detection, cells were permeabilized and epitopes were retrieved by 2 M HCl treatment for 30 min, followed with borax buffer (0.1 M Na2B4O7, pH 8.5) for 10 min. The cells were incubated with primary antibodies at 4°C overnight. Cells were then washed with PBS and probed with TRITC-labeled anti mouse secondary antibody and FITC-labeled anti rabbit secondary antibody (1∶200, Zhong Shan Jin Qiao, China). 4',6-diamidino-2-phenylindole (DAPI, Southern Biotech, USA) was used to stain nuclei in the final step. Confocal images were processed with Volocity Demo software.
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10

Immunofluorescence Staining of Neural Markers

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Differentiated cells were fixed in 4% paraformaldehyde for 30 min. Samples were permeabilized with 2% triton X-100 for 30 min. Blocking in 1 mg/ml bovine serum albumin and primary antibodies incubation against mouse anti nestin (1:300, Abcam, Cambridge, MA, USA), mouse anti glial fibrillary acidic protein (GFAP) (1:600, Abcam, Cambridge, MA, USA) and mouse anti microtubule-associated protein 2 (MAP2) (1:300, Abcam, Cambridge, MA, USA) were performed overnight. The secondary antibodies, anti-mouse fluorescein isothiocyanate-conjugated IgG antibody (1:500, Abcam, Cambridge, MA, USA) were used for 2 h at 37°C. For nucleus visualization, the cells were stained with 4’, 6-diamidino-2-phenylindole (DAPI) (1:1000, Sigma-Aldrich, St. Louis, MO, USA). Experiments were performed in triplicate and samples were observed using a fluorescence microscope (Olympus BX51, Japan). To merge the pictures, image J 1.42 software (Wayne Rasband, National Institutes of Health, Bethesda, MD, USA) was used. At least 100 cells were counted on per sample.
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