The largest database of trusted experimental protocols

Exionlctmad system

Manufactured by AB Sciex
Sourced in United States

The ExionLCTMAD system is a liquid chromatography-tandem mass spectrometry (LC-MS/MS) instrument designed for high-performance analytical applications. It combines a liquid chromatography system with a triple quadrupole mass spectrometer to enable the separation, detection, and quantification of compounds in complex samples.

Automatically generated - may contain errors

7 protocols using exionlctmad system

1

Metabolomic Profiling of Fermented Samples

Check if the same lab product or an alternative is used in the 5 most similar protocols
F-AOS and F-Non-O samples at 96 h of fermentation, collected as previous mentioned, were thawed on ice. A quality control (QC) sample was made by mixing and blending equal volumes (10 μL) of each fermentation sample and injected at regular intervals (every eight samples). Metabolites in F-AOS and F-Non-O were extracted with methanol/water (4:1, v/v) solution. The samples were placed at − 20℃ for 30 min to precipitate proteins. After centrifugation at 13000 g and 4℃ for 15 min, the supernatant was carefully transferred to sample vials for LC–MS/MS analysis. Samples (10 μL) were injected into ExionLCtmad system (AB Sciex, Milford, MA, USA) equipped with an Acquity UPLC Beh C18 column (100 mm × 2.1 mm, 1.7 µm; Waters, Milford, MA, USA). The instrumental and chromatographic conditions were as reported by Liu et al. (2020 (link)).
+ Open protocol
+ Expand
2

Serum Metabolite Extraction and Identification

Check if the same lab product or an alternative is used in the 5 most similar protocols
To extract pure metabolites, the mixture of 100 μl serum sample and 400 μl methanol solution (80%) was subjected to a high-throughput tissue crusher Wonbio-96c (Shanghai Wanbo Biotechnology Co., LTD) after which the supernatants were obtained by centrifugation (13,000 g, 4°C, 15 min) for further LC–MS/MS analysis.
The ExionLCTMAD system (AB Sciex, United States) equipped with an ACQUITY UPLC BEH C18 column (100 mm × 2.1 mm i.d., 1.7 μm, Waters, Milford, United States) was used to separate the metabolites. A pooled quality control sample was used to reflect analytical stability. Mass spectrometric data were acquired using a Thermo UHPLC-Q Exactive Mass Spectrometer. Progenesis QI 2.3 (Nonlinear Dynamics, Waters, United States) was used to analyze the raw data based on UPLC-TOF/MS analyses. MS/MS fragments score > 30 was considered as confidently identified for metabolic confirmation. Based on the above-mentioned metabolic features, MS/MS information was matched to the human metabolome database (HMDB)10 and Metlin database (Dunn et al., 2011 (link)).11
+ Open protocol
+ Expand
3

UPLC/Q-TOF/MS Analysis of Metabolites

Check if the same lab product or an alternative is used in the 5 most similar protocols
The UPLC/Q-TOF/MS analysis was performed on an ExionLCTM AD system connected with X500R QTOF (AB SCIEX, Foster City, CA, USA). Electrospray ionization mass spectra were acquired in negative ion mode by scanning over the range of 100–1500 Da for MS and 50–1500 Da for MS/MS. The optimized MS conditions were as follows: nebulizer gas (gas 1), 50 psi; heater gas (gas 2), 50 psi; curtain gas, 35 psi; ion spray voltage, 5500 V; ion source temperature, 550 °C; declustering potential, −80 V; collision energy, −35 V; CE spread, 15 V. The UPLC/Q-TOF/MS data was processed by SCIEX OS software.
+ Open protocol
+ Expand
4

UPLC-Triple-TOF-MS Metabolite Analysis Protocol

Check if the same lab product or an alternative is used in the 5 most similar protocols
Metabolites were analyzed using the UPLC-Triple-TOF-MS-based platform (AB SCIEX, USA). The chromatographic separation of metabolites was performed using an ExionLCTMAD system (AB Sciex, USA) equipped with ACQUITY UPLC BEH C18 column (100 mm × 2.1 mm i.d., 1.7 μm; Waters, Milford, USA). Mobile phase A is water (containing 0.1% formic acid), mobile phase B is acetonitrile/isopropanol (1/1) (containing 0.1% formic acid); the flow rate is 0.40 mL/min, the injection volume is 20 μL, and the column temperature is 40 °C.
As part of the system adjustment and quality control process, a combined quality control sample (QC) was prepared by mixing all samples of equal volume. QC samples were injected at regular intervals (every 9 samples) to monitor the stability of the analysis. QC samples were treated and tested in the same way as analytical samples. It was preferable to represent the entire sample set, and to monitor the stability of the analysis.
+ Open protocol
+ Expand
5

Targeted Metabolomics Analysis via UPLC-QTOF

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chromatographic separation of the metabolites was performed on a ExionLCTMAD system (AB Sciex, Milford, MA, USA) equipped with an ACQUITY UPLC BEH C18 column (100 mm × 2.1 mm i.d., 1.7 µm; Waters, Milford, MA, USA). The experimental conditions were set up in accordance with Yang [53 (link)]. The mobile phases consisted of 0.1% formic acid in water (solvent A) and 0.1% formic acid in acetonitrile:isopropanol (1:1, v/v) (solvent B). The solvent gradient changed according to Table 3. The sample injection volume was 20 μL, and the flow rate was set to 0.4 mL/min. The column temperature was maintained at 40 °C. During the period of analysis, all of these samples were stored at 4 °C.
The UPLC system was coupled to a quadrupole time-of-flight mass spectrometer (Triple TOFTM5600+, AB Sciex, Milford, MA, USA) equipped with an electrospray ionization (ESI) source operating in positive mode and negative mode. The following parameters were set in accordance with Yang [53 (link)]: Source temperature, 500 °C; curtain gas (CUR), 30 psi; both Ion Source GS1 and GS2, 50 psi; ion-spray voltage floating (ISVF), −4000 V in negative mode and 5000 V in positive mode, respectively; declustering potential, 80 V; collision energy (CE), 20–60 V rolling for MS/MS. Data acquisition was performed with the Data-Dependent Acquisition (DDA) mode. The detection was carried out over a mass range of 50–1000 m/z.
+ Open protocol
+ Expand
6

Metabolite Separation and Mass Spectrometry

Check if the same lab product or an alternative is used in the 5 most similar protocols
The metabolites were separated through chromatography using an ExionL CTMAD system (AB Sciex, USA) equipped with an ACQUITY UPLC BEH C18 column (100 mm × 2.1 mm i.d., 1.7 μm; Waters, Milford, USA). The volume and flow rate of sample injection were 20 μL and 0.4 mL/min, respectively. The temperature of the column was set at 40 °C. All the analyzed samples were stored at 4 °C.
The UPLC was attached with a quadrupole-time-of-flight mass spectrometer (Triple TOFTM 5600+, AB Sciex, USA) and an electrospray ionization (ESI) source. The ESI was operated in positive mode and negative mode. The optimal conditions followed in the process of analysis were as stated: source temperature, 500 °C; curtain gas (CUR), 30 psi; both Ion Source GS1 and GS2, 50 psi; ion-spray voltage floating (ISVF), −4000V in negative mode and 5000V in positive mode, respectively; declustering potential, 80V; a collision energy (CE), 20–60V rolling for MS/MS. Finally, data were acquired with Data Dependent Acquisition (DDA) mode. The sample detection was performed over a mass range of 50–1000 m/z.
+ Open protocol
+ Expand
7

Metabolite Profiling Using UPLC-QTOF-MS

Check if the same lab product or an alternative is used in the 5 most similar protocols
Chromatographic separation of the metabolites was performed on an ExionLCTM AD system (AB Sciex, United States) equipped with an ACQUITY UPLC BEH C18 column (100 mm × 2.1 mm i.d., 1.7 μm; Waters, Milford, United States). The mobile phases consisted of 0.1% formic acid in water (solvent A) and 0.1% formic acid in acetonitrile:isopropanol (1:1, v/v) (solvent B). The solvent gradient changed according to the following conditions: from 0 to 3 min, 95% (A):5% (B) to 80% (A):20% (B); from 3 to 9 min, 80% (A):20% (B) to 5% (A):95% (B); from 9 to 13 min, 5% (A):95% (B) to 5% (A):95% (B); from 13 to 13.1 min, 5% (A):95% (B) to 95% (A):5% (B); and from 13.1 to 16 min, 95% (A):5% (B) to 95% (A):5% (B) to equilibrate the systems. The column temperature was maintained at 40°C. The sample injection volume was 20 μl, and the flow rate was set to 0.4 ml/min. The UPLC system was coupled to a quadrupole-time-of-flight mass spectrometer (Triple TOFTM 5600+, AB Sciex, United States) equipped with an electrospray ionization (ESI) source operating in positive and negative modes. Data acquisition was performed with the data-dependent acquisition (DDA) mode. The detection was carried out over a mass range of 50–1,000 m/z.
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!