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Foxm1 antibody

Manufactured by Santa Cruz Biotechnology
Sourced in United States

The FOXM1 antibody is a laboratory tool used to detect the expression of the FOXM1 protein in biological samples. FOXM1 is a transcription factor involved in cell cycle regulation and proliferation. The antibody can be used in various analytical techniques, such as Western blotting, immunohistochemistry, and immunofluorescence, to identify and quantify the FOXM1 protein in cellular or tissue samples.

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10 protocols using foxm1 antibody

1

FOXM1 Chromatin Immunoprecipitation in TCam-2 Cells

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Chromatin immunoprecipitation followed by qPCR was performed as described previously [72 (link)]. Briefly, TCam-2 cells in 2 biological replicates were fixed with 1% formaldehyde for 15 min and crosslinking was stopped by adding 0.125 M glycine solution. Further steps were performed by Active Motif. In total, 40 µg of chromatin and 25 µL of FOXM1 antibody (Santa Cruz, cat # sc-502) were used for each ChIP reaction. List of the primers used are presented in Table S9.
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2

Chromatin Immunoprecipitation of FoxM1

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Using a ChIP kit (Active Motif, Carlsbad, CA, USA), about 107 cells were cross-linked and lysed. Chromatin was sheared to 300 to 700 bp fragments. Sheared chromatin DNA mixture (normalized inputs) was incubated with 4 μg FoxM1 antibody (#Santa Cruz Biotechnology, Santa Cruz, CA, USA) overnight at 4 °C. Negative control IgG and positive control H3 antibody were added at 10 μl (4 μg) per ChIP reaction. Real-time PCR were amplified using PTTG1 promoter primer (targeting −391 to −385 bp region), PTTG1 exon2 primer (as negative control) and VEGF promoter primer (as positive control).
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3

Chromatin Immunoprecipitation (ChIP) Assay

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Chromatin immunoprecipitation (ChIP) assays were performed in TSCC cells following the protocol provided by the manufacturer (Millipore). In summary, after cross-linking with formaldehyde at 1% final concentration for 10 min at 37°C, the reaction was quenched by addition of glycine to a final concentration of 0.125  M. The cells were lysed in SDS buffer, and the pellet was resuspended in nuclei lysis buffer and sonicated. Immunoprecipitation was carried out with FoxM1 antibody (Santa Cruz Biotechnology). The PCR primer sequences for DNA fragments as parts of the targeted promoters are provided in Supplementary Table S2 (Supplemental digital content 1, http://links.lww.com/ACD/A243).
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4

Immunohistochemical Analysis of FOXM1 in Ovarian Cancer

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The paraffin-embedded tissue samples were collected from 20 women with primary epithelial ovarian cancer, stagesIIto IV, who had undergone initial surgery at the department of obstetrics and gynecology, Renji Hospital, School of Medicine, Shanghai Jiao Tong University between 2005–2008. The slides were deparaffinized, rehydrated and placed into citric acid buffer (pH 6.0, 0.1 M) for heating for 10 min. The endogenous peroxidase activity was then blocked by incubation with 3% H2O2 for 10 min. Afterwards, sections were incubated with blocking buffer (Beyotime, China) for 1 h and then incubated overnight at 4°C with FOXM1 antibody (1∶50, Santa Cruz). Following a 10-min incubation of biotinylated second antibody, the slides were again incubated with streptavidin-peroxidase under the same condition. The immunoreaction was then visualized by incubation with diaminobenzidine chromogen (DAB, Maixin-Bio, China) for 5 min. Finally, the slides were counterstained with hematoxylin, dehydrated, cleared and mounted. Negative controls were incubated in blocking buffer alone. These results were only considered if these control samples demonstrated a negative staining.
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5

Chromatin Immunoprecipitation of FOXM1 in EOC Cells

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Chromatin immunoprecipitation (ChIP) assays were performed in EOC cells following the protocol provided by the manufacturer (Millipore, Bedford, MA). Briefly, after cross-linking with formaldehyde at 1% final concentration for 10 min at 37°C and the reaction was quenched by addition of glycine to a final concentration of 0.125 M. The cells were lysed in SDS buffer and the pellet was resuspended in nuclei lysis buffer and sonicated. Immunoprecipitation was carried out with FOXM1 antibody (Santa Cruz Biotechnology, Dallas, TX). The PCR primer sequences for DNA fragments as parts of the targeted promoters are provided in Supplementary Table S2.
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6

FOXM1 Chromatin Immunoprecipitation Sequencing

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ChIP-Seq was performed as per the protocol from the Myers Lab. 1x107 cells/sample were used to immunoprecipitated the FOXM1 bound chromatin using the FOXM1 antibody (sc-376471, Santa Cruz Biotechnology). The sequencing was performed using Illumina HiSeq4000 and the basic alignment and quality check was employed asper the ENCODE guidelines and the results have been submitted to GEO. GEO accession code for the ChIP-seq data is “GSE176383” which can be accesses at https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE176383 using the token number “svkpwakmznazfqv”.
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7

Co-Immunoprecipitation of FoxM1

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Co-IP was performed using the Pierce Co-IP Kit from Thermo Scientific following the manufacturer’s protocol. Briefly, the FoxM1 antibody (Santa Cruz) was first immobilized for 2 h using AminoLink Plus Coupling Resin. The resin was then washed and incubated with the lysate of lung tissues overnight. A negative control that was provided with the IP kit to assess nonspecific binding received the same treatment as the Co-IP samples. Immunocomplexes were washed five times with washing buffer before being resolved by SDS-PAGE and immunoblotted with the indicated antibodies.
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8

Protein Expression Analysis via Western Blot

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Western-blot analyses were performed as previously described [26 (link)]. The following antibodies were used: mouse monoclonal MELK antibody (Oncotherapy Science), and rabbit polyclonal FOXM1 antibody (Santa Cruz, Dallas, TX), mouse Cyclin B1 antibody (Santa Cruz), Caspase-3 and cleaved Caspase-3 (Cell Signaling, Danvers, MA) mouse monoclonal β-Actin (AC-15) (Sigma-Aldrich).
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9

FOXM1 and GADPH Expression Analysis

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Western blot analysis to assess FOXM1 (1:500, Santa Cruz Biotechnology, Santa Cruz, CA) and GADPH (1:1000, Proteintech, China) expression was carried out as described previously [18 (link)]. GADPH primary antibody was purchased from Sigma (St. Louis, MO, USA). FOXM1 antibody was purchased from Santa Cruz Biotechnology, Inc. USA.
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10

ChIP Assay in Lung Cancer Cells

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Chromatin immunoprecipitation (ChIP) assays were performed in lung adenocarcinoma cells following the protocol provided by the manufacturer (Millipore, Bedford, MA). Briefly, after cross-linking with formaldehyde at 1% final concentration for 10 min at 37°C and the reaction was quenched by addition of glycine to a final concentration of 0.125 M. The cells were lysed in SDS buffer and the pellet was resuspended in nuclei lysis buffer and sonicated. Immunoprecipitation was carried out with FOXM1 antibody (Santa Cruz Biotechnology, Dallas, TX). The PCR primer sequences for DNA fragments as parts of the targeted promoters are provided in Supplementary Table S2.
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