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7 protocols using γ tubulin clone gtu 88

1

Immunofluorescence Staining of Galectin-3

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Rat (dilution 1:50) and rabbit polyclonal (1:100) antibodies directed
against Galectin-3 were kindly provided by Dr. H. Leffler (Lund University,
Sweden) and Dr. H.P. Elsässer (Philipps University, Marburg),
respectively. Monoclonal anti-acetylated α-tubulin (clone 6-11B-1, 1:200)
and γ-tubulin (clone GTU-88, 1:50) were from Sigma (Saint-Louis, MO) and
Abcam (Cambridge), respectively. Rabbit polyclonal IFT88 (1:100) was from
Proteintech (Chicago, IL). Anti-mouse Alexa-488 and anti-rabbit Alexa-568
secondary antibodies (1:250) were from Life Technologies (Paisley, UK).
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2

Western Blot Analysis of DNA Repair Proteins

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Cells were harvested by trypsinization, lysed in 2X Laemmli buffer (100 mM Tris-HCl pH 6.8, 200 µM DTT, 3% SDS, 20% glycerol, 0.05% bromophenol blue) at 104 cell/µl. The lysate was denatured for 10 min at 95°C, and sheared by forcing it through a 28-gauge insulin needle 10 times. Lysate from 105 cells was loaded on an SDS/PAGE and transferred to a nitrocellulose membrane. The membrane was blocked in 5% milk in TBS with 0.1% Tween-20 and incubated with primary antibody in TBS/5% milk/0.1% Tween-20 for 2 hours at room temperature. The following primary antibodies were utilized: Polθ (ab80906, Abcam); TRF1 (1449, rabbit polyclonal); Rap1 (1252, rabbit polyclonal); Phospho-Chk2 (Thr68) (Rabbit polyclonal, Cell Signaling); Chk2 (rabbit polyclonal, Cell Signaling); Phospho-Chk1 (Ser 345) (mouse monoclonal, Cell Signaling); Chk1 (mouse monoclonal, Santa Cruz); Lig3 (mouse monoclonal, Santa Cruz); Myc (9E10; Calbiochem); γ- tubulin (clone GTU-88, Sigma); PARP1 (Polyclonal, Cell signaling). (From http://delangelab.rockefeller.edu/protocols)
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3

Western Blot Analysis of Cell Lysates

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Cells were harvested by trypsinization, lysed in 2X Laemmli buffer (100 mM Tris-HCl pH 6.8, 200 ∝M DTT, 3% SDS, 20% glycerol, 0.05% bromophenol blue) at 104 cell/μl. The lysate was denatured for 10 min at 95°C, and sheared by forcing it through a 28-gauge insulin needle 5 times. Lysates from 105 cells were loaded on an SDS/PAGE and transferred to a nitrocellulose membrane. The membrane was blocked in 5% milk in TBS with 0.1%Tween-20 and incubated with primary antibody in TBS/5% milk/0.1% Tween-20 for 2 hours at room temperature. The following primary antibodies were utilized: Myc (9E10; Calbiochem); γ-tubulin (clone GTU-88, Sigma); Flag (anti-Flag M2, Sigma); Rad51 (H2 sc8349, Santa Cruz); RPA1 (A300-241A, Bethyl).
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4

Western Blot Analysis of PLK4

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Western immunoblot analyses were performed as described previously (46 (link)) using antibodies recognizing PLK4 (3258; Cell Signaling Technology and Abcam), phospho-PLK4 (Ab#3 and 14299), γ-tubulin (clone GTU-88; Sigma), and α-tubulin (DM1A mouse monoclonal antibody T6199; Sigma).
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5

Immunohistochemical Analysis of Retinal Inflammation

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Cx3cr1gfp/+ control mice were sacrificed at P70. CTRL (sham) and LPS intravitreally injected adult C57BL6/J mice were sacrificed 20 h after the injection procedure. Eyes were removed and kept in 4% PFA solution overnight. Eyes were then cryoprotected in 30% sucrose and, after precipitation, frozen in isopentane prior to storage at 80°C. Frozen eyes were cut in 50-μm-thick sections with a Leica cryostat and processed for IF as published.55 (link) Briefly, slices were immersed for 30 min in a boiling 1 mm EDTA solution (pH = 8.0) for antigen retrieval, then incubated with blocking solution (0.1% Triton X-100, 3% BSA and 0.05% Tween 20 in PBS) for 1 h at RT. Sections were incubated with primary antibodies (Iba1, FujiFilm Wako, 1:500; γ-tubulin, clone GTU-88, Sigma-Aldrich, 1:500; GM130, BD bioscience, 1:500) in diluted blocking solution overnight at 4°C and 1 h at RT with fluorophore-conjugated secondary antibodies (Alexa Fluor 488 goat anti-rabbit, 594 goat anti-mouse) and Hoechst for nuclei visualization. The sections were mounted with anti-fade mounting medium (Invitrogen).
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6

Immunofluorescence Staining of Galectin-3

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Rat (dilution 1:50) and rabbit polyclonal (1:100) antibodies directed
against Galectin-3 were kindly provided by Dr. H. Leffler (Lund University,
Sweden) and Dr. H.P. Elsässer (Philipps University, Marburg),
respectively. Monoclonal anti-acetylated α-tubulin (clone 6-11B-1, 1:200)
and γ-tubulin (clone GTU-88, 1:50) were from Sigma (Saint-Louis, MO) and
Abcam (Cambridge), respectively. Rabbit polyclonal IFT88 (1:100) was from
Proteintech (Chicago, IL). Anti-mouse Alexa-488 and anti-rabbit Alexa-568
secondary antibodies (1:250) were from Life Technologies (Paisley, UK).
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7

Protein Extraction and Western Blot Analysis

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Cells were washed in PBS and lysed in the following buffer: 50 mM Tris–HCl, pH 7.4, 0.5% IGEPAL (Sigma‐Aldrich, St. Louis, MO, USA), 150 mM NaCl, 1 mM DTT, 5% glycerol, 50 mM NaF, 1 mM PMSF, 25 mM β‐glycerophosphate, 1 mM vanadate, Complete Mini Protease Inhibitor Cocktail (Roche Diagnostics, Basel, Switzerland). Proteins were then resolved by SDS–PAGE and transferred onto a nitrocellulose membrane. Primary antibodies were directed against α‐tubulin (clone DM1A, 1:5,000; Sigma‐Aldrich, St. Louis, MO, USA), γ‐tubulin (clone GTU‐88, 1:5,000; Sigma‐Aldrich, St. Louis, MO, USA), GFP (ab290; 1:5,000; Abcam, Cambridge, UK), STIL (ab89314, 1:2,000; Abcam, Cambridge, UK), Sas‐6 (Kleylein‐Sohn et al, 2007), CP110 (1:2,000, Schmidt et al, 2009), cyclin A (1:2,000, Maridor et al, 1993), cyclin B1 (05‐373, 1:2,000, Merck Millipore, Darmstadt, Germany), and phospho‐histone H3/serine 10 (3377, 1:1,000, Cell Signaling Technology, Danvers, MA, USA); secondary antibodies were HRP‐conjugated anti‐mouse immunoglobulin (170‐6516, 1:3,000, Bio‐Rad, Hercules, CA, USA) or anti‐rabbit immunoglobulin (170‐6515, 1:3,000, Bio‐Rad, Hercules, CA, USA).
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