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Complete protease inhibitors cocktail tablets

Manufactured by Roche
Sourced in Switzerland

The Complete Protease Inhibitors Cocktail Tablets are a laboratory product designed to inhibit a broad spectrum of proteases. The tablets contain a proprietary blend of protease inhibitors to effectively suppress protease activity in various research and analytical applications.

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8 protocols using complete protease inhibitors cocktail tablets

1

Ubiquitin Topoisomer Preparation and Analysis

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Ubiquitin monomer, BSA, Tris and DTT were purchased from Sigma Aldrich. Di-Ubiquitin topoisomers (linear, K6, K11, K27, K29, K33, K48 and K63-linked ubiquitin-ubiquitin) were purchased from Boston Biochem. Complete protease inhibitors cocktail tablets were obtained from Roche. Protein G–Sepharose, glutathione–Sepharose and ECL reagents were from GE Healthcare. Doxycycline, DMSO, BSA, 3-amino, 1,2,4 triazole and benzamidine were from Sigma–Aldrich. PMSF was from Melford. Novex 4–12% polyacrylamide Bis-Tris gels, LDS sample buffer, puromycin, hygromycin, blasticidin and other tissue culture reagents were from Invitrogen Life Technologies. Instant Blue Coomassie stain was from Expedeon. PEI (polyethylenimine) was from Polysciences.
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2

Immunoblot Analysis of Intestinal Proteins

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Tissues, harvested from 6- to 9-week-old female C57BL/6 mice, were homogenized in cell lysis buffer (50 mM Tris, pH 8, 150 mM NaCl, 1% Triton X-100) containing complete protease inhibitors cocktail tablets (Roche Diagnostics). Isolated small intestinal epithelial cells, lamina propria lymphocytes (LPLs), and IELs were lysed in cell lysis buffer. Cell and tissue lysates were clarified by centrifugation, and protein concentration was measured with BCA Protein Assay Kit (Pierce). Ten micrograms of protein were denaturated in reducing sample buffer (NuPAGE LDS 4×; Novex®, Life Technologies) containing 1M DTT (Sigma-Aldrich) and loaded onto a NuPage 4–12% Bis-Tris Gel (Novex®, Life Technologies). Separated proteins were transferred onto nitrocellulose transfer membranes (Millipore) that were immunoblotted using anti-FLAG antibody (Sigma-Aldrich), anti-GFP antibody (Sigma-Aldrich), anti-Btnl6 rabbit polyclonal antiserum (Moravian-Biotech), rabbit preimmune serum, or anti β-actin antibody (Sigma-Aldrich), and detected with HRP-conjugated goat anti-mouse antibody or HRP-conjugated goat anti-rabbit antibody (Jackson ImmunoResearch).
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3

Western Blot Protein Detection Protocol

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Cells were washed with PBS and harvested in RIPA buffer (Thermo Fisher Scientific) supplemented with Complete Protease Inhibitors Cocktail Tablets and PhosSTOP Phosphatase Inhibitors Cocktail Tablets (Roche Applied Science). Proteins were denatured by boiling in Laemmli buffer (BioRad, Hercules, CA, USA) and resolved by 12% SDS-PAGE. Following protein transfer, the nitrocellulose membrane was blocked with 5% milk in 1× TBST and probed with primary antibody in 5% BSA in 1× TBST overnight at 4°C. Following primary antibody incubation, membranes were washed in 1× TBST and incubated with HRP-linked secondary antibody (Cell Signaling Technology) in 1× TBST. Membranes were washed 5× for 5 min with 1× TBST and detection was visualized using SuperSignal West Pico Chemiluminescent Substrate (Thermo Fisher Scientific). Western blots were quantified using Image Studio Lite Ver. 3.1 following software instructions and graphed on GraphPad Prism 5.
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4

Thyroid Cancer Cell Proteome Analysis

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Briefly, the pellet of the spheroids obtained from 6 PTCs, 1 FTC and from their corresponding normal thyroid tissues were grown for 2 weeks and harvested for non-treated, DMSO treated (DMSO, 20 μM) and SP treated (SP, 20 μM) evaluation after additional 96 hours. They were homogenized and lysed in a constant amount of RIPA buffer (10 mM Tris-HCl pH 7.5, 500 mM NaCl, 0.1% SDS, 1% NP40, 1% Na-deoxycholate, 2 mM EDTA), supplemented with complete protease inhibitors cocktail tablets (Roche, Basel, Switzerland). After sonication, 5μL of protein extracts were used for protein determination with Pierce BCA protein assay kit (Thermo Fisher, Waltham, Massachusetts, USA). Each sample was measured in duplicate and samples immediately stored at -80°C.
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5

Ubiquitin Topoisomers Biochemical Characterization

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Ubiquitin monomer, BSA, Tris, Triton X-100 and DTT, trimethyl-psoralen (TMP), hydroxyurea, angelicin and BrdU were purchased from Sigma-Aldrich. Di-ubiquitin topoisomers (linear, K6-, K11-, K27-, K29-, K33-, K48- and K63-linked ubiquitin–ubiquitin) were purchased from Boston Biochem. Complete protease inhibitors cocktail tablets were obtained from Roche. Tween-20, Colloidal blue staining kit and precast SDS–polyacrylamide Bis-Tris gels (Invitrogen). MMC was from Duchefa.
All recombinant proteins, plasmids and antibodies generated for the present study are available upon request and described in further detail on our reagents website (https://mrcppureagents.dundee.ac.uk/).
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6

Transient Co-expression of SRP54 and MICA Proteins

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The pQCXIP vectors (Clontech) expressing the full-length wildtype and mutant SRP54 alleles (Carapito et al., 2017b) as well as the extracellular part of the non-conventional Major Histocompatibility Complex class I MICA protein (MICA*008 allelic variant) were previously reported (Carapito et al., 2017a) . Both vectors were transiently co-transfected in equal quantities (1mg) into HEK293 cells (Sigma-Aldrich) grown in suspension in serum-free Freestyle medium (Thermo Fisher Scientific) at 37 C, 8% CO2, 70% humidity, 100 rpm (50 mm shaking amplitude on an ISF1-X Shaker, Kuehner). For each transfection 2 x 10 6 cells were transfected with 7mg Polyethylenimine (PEI, Clinisciences) as transfection agent, i.e. a DNA/transfectant ratio: 1/3.5). The empty pQCXIP vector and a SRP54 variant with a neutral amino-acid modification (p.Ala4Gly) were used as controls. Cells and the cell culture supernatants were harvested 48 hours post-transfection. Cells were lysed using lysis buffer (20 mM Tris, pH7.5, 150 mM NaCl, 1% NP40 and protease inhibitors (complete protease inhibitors cocktail tablets, Roche)). The proteins were detected by Western blotting using a monoclonal anti-SRP54 antibody (SC-393855, Santa Cruz), an anti-GAPDH antibody (MAB374, Millipore), and an in-house developed mouse monoclonal anti-MICA antibody (Carapito et al., 2017a) .
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7

Molecular Cloning and Protein Expression

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DL-dithiothreitol (DTT, D0632), N-ethylmaleimide (NEM, E1271), phenylmethanesulfonylfluoride (PMSF, P7626), iodoacetamide (I1149), IGEPAL CA-630 (NP40, I3021), isopropyl-β-D-thiogalaktosid (IPTG, I1000-10 from Saveen Werner), sodium deoxycholate monohydrate (DOC, D5670), Triton X-100 (T9284), sodium dodecyl sulfate (SDS, L3771), iodacetamide (I-1149), Tween-20 (P9416), ethylenediaminetetraacetic acid disodium salt dehydrate (EDTA, E4884), Trizma base (T93349), dithiothreitol (DTT, D5545), ampicillin (ampicillin sodium salt, A0166), streptomycin (streptomycin sulfate salt, S9137), kanamycin (kanamycin solution, K-0254), poly-D-lysine hydrobromide (P-6407), paraformaldehyde (P-6148), and all oligonucleotides for cloning were from Sigma-Aldrich. Complete protease inhibitors cocktail tablets (protease inhibitors) were from Roche Diagnostic. Fluoroshield mounting medium with DAPI (ab104139) was from AbCam. Grade modified trypsin (V5073) was from Promega. Restriction enzymes BamHI (FD0054), XhoI (FD0694), NotI (FD0594), and KpnI (FD0524) and ligase (EL0011) were from Thermo Fischer Scientific.
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8

Immunoblotting of Mouse Intestinal Proteins

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Small intestine, harvested from GF and CV C57BL/6 mice, was homogenized in cell lysis buffer (50 mM Tris-HCl, pH 8, 150 mM NaCl, 1% Triton X-100) containing complete protease inhibitors cocktail tablets (Roche Diagnostics, Mannheim, Germany). Small intestinal epithelial cells isolated from CV C57BL/6 mice and Btnl6-transfected MODE-K cells were lysed in cell lysis buffer. Cell and tissue lysates were clarified by centrifugation, and protein concentration was measured with BCA Protein Assay Kit (Pierce, Rockford, IL). Twenty micrograms of protein were denatured in reducing sample buffer (NuPAGE LDS 4×; Novex®, Life Technologies, Carlsbad, CA) containing 1M DTT (Sigma-Aldrich, St. Louis, MO) and loaded onto a NuPage 4–12% Bis-Tris Gel (Novex®, Life Technologies, Carlsbad, CA). Separated proteins were transferred onto nitrocellulose transfer membranes (Merck Millipore, Darmstadt, Germany) that were immunoblotted using anti-FLAG antibody (Sigma-Aldrich, St. Louis, MO), anti-Btnl6 rabbit polyclonal antiserum (Moravian-Biotech, Brno, Czech Republic), rabbit pre-immune serum, or anti-β-actin antibody (Sigma-Aldrich, St. Louis, MO), and detected with HRP-conjugated goat anti-mouse antibody or HRP-conjugated goat anti-rabbit antibody (Jackson ImmunoResearch, West Grove, PA).
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