The largest database of trusted experimental protocols

2 protocols using cspd reagent

1

Quantitative Analysis of mRNA Expression

Check if the same lab product or an alternative is used in the 5 most similar protocols
Northern blot analysis of β-globin mRNA was performed as previously described (30 (link)), using digoxygenin-labeled antisense probes and alkaline phosphatase-coupled anti-digoxygenin antibody (Roche). Blots were developed with the LAS 3000 imaging system (Fujifilm) using CSPD reagent (Roche). For RT-qPCR 500 ng of total RNA was reverse-transcribed using oligo(dT)18 primers (Eurofins) and RevertAid Reverse Transcriptase (Thermo Fisher Scientific). qPCRs were carried out as described (13 (link)), using TaqMan assays (Life Technologies, assay-ID Hs00230071_m1 for NFKBIZ mRNA, Hs00174131_m1 for IL6 mRNA, Hs99999905_m1 for GAPDH mRNA, Hs00262018_m1 for NFKBID mRNA, Hs00153283_m1 for NFKBIA mRNA and custom-made assays for rabbit β-globin and firefly luciferase mRNAs) or SybrGreen-based detection (Life Technologies) for mRNAs using primers as follows: GFP: sense 5′-TGCAGTGCTTCAGCCGCTAC-3′, antisense 5′-TCGCCCTCGAACTTCACCTC-3′; Renilla luciferase: sense 5′-CGTCGTGCCTCACATCGAGC-3′, antisense 5′-GCTCGAACCAAGCGGTGAGG-3′; MCPIP1: sense 5′-GGCTGGACAGAGGGAGGATT-3′, antisense 5′-TGACCCACTGAGGCAGACAG-3′; in vitro-transcribed CrPV IRES RNA: sense 5′-GCCTAATACGACTCACTATAGGGTTTAGTGAACCGTGGATC-3′, antisense 5′-GGCGGATCCTGTATCTTGAAATGTAGCAGGTAAA-3′; in vitro-transcribed TSE RNA: sense 5′-TTGGAGCCTGGCTAGCAACA-3′, antisense 5′-TTGCCAATATAAGGCAAATGGTCT-3′.
+ Open protocol
+ Expand
2

Arabidopsis Total RNA Northern Blot

Check if the same lab product or an alternative is used in the 5 most similar protocols
Total RNA (3 μg) extracted from Arabidopsis seedlings was resolved on 1.2% w/v agarose/formaldehyde gels and transferred onto positively charged nylon membranes (Roche Applied Science), followed by membrane staining with methylene blue (0.04% (w/v) in 0.5M sodium acetate, pH 5.2). DIG-labelled DNA probes were generated using Arabidopsis genomic DNA or cDNA as template, the PCR DIG probe synthesis kit (Roche Applied Science), and primer pairs listed in Supplementary Table S1. Hybridisations were performed in DIG Easy Hyb solution (Roche Applied Science) according to the manufacturer's instructions; chemiluminescent detection of signals was performed using anti-digoxigenin-alkaline phosphatase conjugates and CSPD reagent (Roche Applied Science).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!