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12 protocols using waters 2707

1

Analytical Instrumentation for Characterization

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Microplate /cuvette reader (Spectramax M5: Molecular Devices, California, USA). Automatic microplate strip washer (MW-12A: Bio-Medical Electronics Co. Ltd., Shenzhen, China). HPLC apparatus equipped with Waters 1525 binary HPLC pump, Waters 2707 autosampler and Waters 2489 UV-visible detector (Waters Corporation, Milford, Massachusetts, USA). UV-visible spectrophotometer (V-530: JASCO, Tokyo, Japan). Mass spectrometer (Varian TQ 320 GC/MS/MS: Varian, Palo Alto, USA). FT-IR spectrophotometer (Shimadzu, Osaka, Japan). Bruker NMR spectrometer (Bruker Corporation, Bruker Daltonik GmbH, Bremen, Germany). Milli-Q water purification system (Labo, Millipore Ltd., Bedford, USA).
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2

Purification and Characterization of Organic Compounds

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Silica gel 60 (40–63 μm; Merck, Darmstadt, Germany) was used to run column chromatography (CC). TLC was completed on glass and aluminum plates, pre-coated with Silica gel 60 F254 (Merck). Preparative high-performance liquid chromatography (HPLC) was performed with a Waters 2707 instrument (Waters, Milford, MA, USA) with a C-18 Luna column (250 mm×21.2 mm, 5 μm; CA, USA) and PDA 2998 detector (Waters). 1H and 13C 1D NMR and 2D NMR spectra were determined in JEOL JNM-FX500, and the UV spectra were recorded on a Shimadzu UV-160A spectrophotometer using ethanol as the solvent. The MS data were obtained with an Agilent 6530. The IR spectra were measured by Fourier transform IR (FT-IR) spectroscopy using a Perkin-Elmer RX 1 spectrometer for the 4,000–400 cm−1 frequency range.
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3

Quantification of Salicylic Acid by HPLC

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The total SA was analyzed by high-performance liquid chromatography (HPLC) [85 (link)]. The plant tissue (seedling) (0.2–0.3 g) was extracted using 20 mL of dH2O (90–100 °C) and incubated at 100 °C for 30 min with subsequent cooling. Membrane filters (0.45 µm) (Chromafil Xtra PTFE–45/13, Macherey-Nagel GmbH Co, Duren, Germany) were used to filter the extracts. The analysis was caried out by a Waters Breeze chromatograph (Waters Corporation, Milford, MA, USA) with a Waters 2487 Dual & Absorbance diode array detector at 305 nm. A 250 × 4.6 mm Pursuit C18 5 µm column (Agilent Technologies, Santa Clara, CA, USA) was used. As a mobile phase, 0.5% solution of H3PO4: acetonitrile = 65:35 (1.0 mL min−1) was used. A total of 20 µL of the extract was introduced into the chromatography system using an automated sampler Waters 2707 (Waters Corporation, Milford, MA, USA). The software calibration curve was used in calculating the total SA content.
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4

Prep-HPLC Analysis of Bioactive Compounds

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The Prep-HPLC analysis was performed as described in our recent studies [9 (link),10 (link)]. The extract sample (10 mg/mL) was dissolved in ultrapure water (analytical grade, Merck KGaA, Darmstadt, Germany), centrifugated at 8000× g for 20 min, and then passed through 0.22 μm membrane (Shanghai Sangon Biological Engineeing Technology and Service Co., Ltd., Shanghai, China). The filtration was subjected to Prep-HPLC using a Waters 2707 (Waters, Milford, MA, USA) linked with a UPLC Sunfire C18 column (5 μm, 10 × 250 mm) (Waters, Milford, MA, USA) with the parameters described recently by Liu et al. [9 (link)]. After the Prep-HPLC, the isolated fragments were individually collected, concentrated, and evaporated using the rotary evaporator (IKA, Staufen, Germany), and then redissolved in ultrapure water for further analyses.
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5

Cerebrospinal Fluid Glutamate Analysis in Mice

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The mice were placed in a prone position, and the neck was bent at a 45‐degree angle. The occipital bone to the atlas muscle was cut with iris scissors to expose the white dura, and it was punctured at 2 mm between the occipital bone and the atlas cone with a needle. A micropipette was used to extract 2.5 μl of cerebrospinal fluid (CSF). The collected CSF was centrifuged at 250 g for 10 min and was frozen at −80°C. The glutamate level was determined using a Waters high‐performance liquid chromatography (HPLC) system (Waters Breeze 1525) equipped with a UV–Visible detector (Waters 2489), an autosampler (Waters 2707), and an isocratic pump (Waters 1515). Trigeminal ganglions (TGs) from the unilateral surface were dissected immediately and frozen at −80°C for further assays.
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6

Prep-HPLC Analysis of Freeze-Dried Samples

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Aliquots (10 mg/mL) of freeze-dried samples resolved in H2O (Analytical grade, Merck KGaA, Darmstadt, Germany) were centrifuged at 12,000 rpm for 20 min. The supernatant was filtered through 0.22 µm membrane (Sangon, Shanghai, China), and the filtration was collected for further analysis. Prep-HPLC was run using Waters 2707 (Waters, Milford, Massachusetts, USA) linked with UPLC Sunfire C18 column (5 μm, 10 × 250 mm) (Waters, Massachusetts, USA) at the following parameters: column temperature, 40 °C; injection volume, 100 μL; and mobile phase of methanol (eluent A) and water (eluent B) at a flow rate of 4 mL/min (isocratic elution: 0–15 min, 20% eluent A and 80% eluent B). Photo-diode array (PDA) spectra were measured in the wavelength ranging from 200 to 600 nm.
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7

Striatal Dopamine Quantification by HPLC

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Levels of striatal dopamine and dopamine metabolites, homovanillic acid (HVA) and 3,4-dihydroxyphenylacetic acid (DOPAC), were measured in frozen striatal tissue via high-performance liquid chromatography (HPLC) through the Neurochemistry Core Facility at Vanderbilt University Medical Center (https://medschool.vanderbilt.edu/vbi-core-labs/). Briefly, brain tissue was homogenized, using a tissue dismembrator, in 0.1M trichloroacetic acid, containing 10 mM sodium acetate, 0.1 mM EDTA, 5ng/ml isoproterenol (as internal standard) and 10.5 % methanol (pH 3.8). After centrifugation, the supernatant was analyzed by HPLC (Waters 515 pump with Waters 2707 autosampler, Waters Corp., Milford, MA USA) with electrochemical detection (Antec Decade II, Boston, MA USA). The HPLC was equipped with a Phenomenex Kinetex C18 HPLC column (100 × 4.60 mm, 2.6μm) and biogenic amines were eluted with a mobile phase consisting of 89.5% 0.1M TCA, 10 mM sodium acetate, 0.1 mM EDTA and 10.5% methanol (pH 3.8). Solvent is delivered at 0.6 ml/min.
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8

Purification and Characterization of Skin Secretions

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Five milligrams of lyophilized skin secretion were dissolved in 1 ml of deionized water containing 0.05% (v/v) trifluoroacetic acid (TFA, obtained from Sigma-Aldrich, St. Louis, MO, USA). The sample was subsequently centrifuged and the supernatant was further filtered through a 0.45 μm RC membrane (Phenomenex, Macclesfield, UK). The filtrate was injected into a reverse-phase HPLC system (UV Detector: Waters 2489; Binary HPLC Pump: Waters 1525; Autosampler: Waters 2707 (Waters Ireland, Dublin, Ireland); Column: Phenomenex Aeris Peptide, C18, 250 × 10.0 mm (Phenomenex, Macclesfield, UK), followed by elution with a gradient program from 0.05/99.95 (v/v) TFA/water (0 min) to 0.05/19.95/80.0 (v/v/v) TFA/water/acetonitrile in 240 min. The column effluent was monitored by UV absorbance at 214 nm, and fractions were collected automatically at 1 min intervals.
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9

HPLC Analysis of Drug Substance

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The HPLC system consisted of Waters 1525 binary pump Separation module (Waters, USA) fitted with C18 column (300 mm × 4.6 mm). The autosampler injection system (Waters 2707) used was a 10 µl sample loop. A Millipore Swinnex type filter (pore size = 0.45 µm) was obtained from Millipore (Bangalore, India). A Waters HPLC system equipped with a Waters 484 variable UV absorbance detector and a Waters 2707 plus autosampler was used. Waters 515 solvent delivery system was used to operate the gradient flow through a symmetry C 18 column (4.6 × 75 mm, 3.5 μm spherical particles). with 0.05 M orthophosporic pH 2.0 and acetonitrile as 35 and 65%, respectively as a mobile phase at a flow rate of 2.0 mL/min and the run time was 2 min. Degassing was achieved via filtration through a 0.45 μm Millipore membrane filter and sonication for 10 min. The injection volume was 20 µl and detection was at 210 nm. The HPLC system was operated at 25 °C. Data were collected with a Breeze Chromatography Manager Data Collection System. A daily standard calibration curve (6 standards ranging from 10 to 200 µg/ml was prepared to determine the unknown DS concentration.
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10

HPLC Analysis of Phenolic Extracts

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For HPLC analysis, the soluble-free, soluble-conjugated and insoluble-bound phenolic extracts were filtered through 0.45 μm membrane filters before analysis. Then, 10 μl of each sample extract was fractionated using a waters HPLC system equipped with a waters 2707 autosampler, a Waters 2489 UV/Visible detector and a Waters 1525 binary pump on a 250 mm × 4.6 mm i.d., 5 μm, Inertsil C18 analytical column. Gradient elution was performed with a mobile phase consisting of A (0.1% acetic acid in water) and B (0.1% acetic acid in methanol). The flow rate was 1 ml min−1, and the gradient elution was set according to the method reported by Shao et al. as follows: 0 to 11 min, 9% to 14% B; 11 to 14 min, 14% to 15% B; 14 to 17 min, 15% B; 17 to 24 min, 15% to 16.5% B; 24 to 28 min, 16.5% to 19% B; 28 to 30 min, 19% to 25% B; 30 to 36 min, 25% to 26% B; 36 to 38 min, 26% to 28% B; 38 to 41 min, 28% to 35% B; 41 to 46 min, 35% to 40% B; 46 to 48 min, 40% to 48% B; 48 to 53 min, 48% to 53% B; 53 to 70 min, 53% to 70% B; 70 to 72 min, 9% B; 72 to 75 min, 9% B.15 (link) The column was warmed to 40 °C. The phenolic acids were detected at a wavelength of 280 nm, and the phenolic acid contents were quantified using the external calibration curves.
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