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73 protocols using human cd34 microbead kit

1

Isolation of CD34+ Cells from Umbilical Cord Blood

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Umbilical cord blood (CB) samples from full-term pregnancies (provided by Lyon Sud Hospital, Lyon) were collected in bags containing anti-coagulant after informed consent of donors and approval was obtained by the ethics committees of the hospitals according to the Helsinki Declaration. Low-density cells were separated by Ficoll gradient (Sigma-Aldrich, St Louis, MO). CD34+ purification was performed by positive magnetic cell separation using the Automacs pro-separator (Miltenyi Biotech) after staining of the cells with the human CD34+ MicroBead Kit (Miltenyi Biotec). Purity of the selected CD34+ cell fraction was evaluated by FACS analysis (FACSCanto, BD) with APC-conjugated anti-CD34 antibody (Miltenyi Biotech). Cells were frozen in FCS 10% DMSO for later use.
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2

Purifying Leukemia Stem Cells for Transfection

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Cells were thawed in a 37 °C water bath, washed once with Iscove’s modified Dulbecco medium (IMDM) containing 20% fetal bovine serum (FBS). Then, the cells were culture in IMDM supplemented with 20% FBS. CD34+ leukemia stem/progenitor cells were purified using human CD34 MicroBead Kit (Miltenyi Biotec, Auburn, CA) and fluorescence-activated cell sorting (FACS). The transient transfections of primary leukemia cells were performed using the Neon Transfection System with 10 μL reactions according to the manufacturer’s guidelines (Invitrogen, USA).
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3

Isolation of Haemogenic Endothelium from Embryoid Bodies

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Embryoid bodies were dissociated on day 8 by digestion with 0.05% trypsin for 5 min at 37 °C, pipetted thoroughly with p1000 to generate a single-cell suspension and washed with PBS + 2%FBS. Dissociated embryoid bodies were immediately processed for isolation of haemogenic endothelium. Cells were resuspended in 1 mL PBS+2%FBS and incubated with human CD34 MicroBead kit for 1 h (Miltenyl Biotec, 130-046-702). After incubation, cells were washed with PBS+2%FBS and isolated by magnetic cell isolation using LS columns (Miltenyl Biotec, 130-042-401). Sorted CD34+ cells were resuspended in supplemented StemPro-34 medium, containing Y-27632 (10 μM), TPO (30 ng ml−1), IL-3 (10 ng ml−1), SCF (50 ng ml−1), IL-6 (10 ng ml−1), IL-11 (5 ng ml−1), IGF-1 (25 ng ml−1), VEGF (5 ng ml−1), bFGF (5 ng ml−1), BMP4 (10 ng ml−1), and FLT3 (10 ng ml−1) as reported20 (link) and seeded at a density of 25 × 103 to 50 × 103 cells per well onto thin-layer Matrigel-coated 24-well plates. All recombinant factors were human and most were purchased from Peprotech.
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4

Purification of CD34+ Cells from Cord Blood

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Human cord blood CD34+ cells (ZenBio Inc., Research Triangle Park, NC, USA) were purified by magnetic activated cell sorting (MACS) using the human CD34 MicroBead Kit (Miltenyi Biotec) according to manufacturer's protocol.
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5

Isolation and Expansion of CD34+ Cells from Cord Blood

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De-identified cord blood samples were purchased from the State University of New York Upstate Medical Center’s Upstate Cord Blood Bank Program. Mononuclear cells were isolated using Ficoll-Paque Plus (Cytiva). CD34 cells were then purified using human CD34 MicroBead kit (Miltenyi Biotec) following the manufacturer’s protocol and cultured in CD34 expansion medium (StemSpan SFEMII (Stemcell Technology), 50 ng/ml SCF, IL-3, IL-6, TPO, FLT3L (Peprotech) and 500 nM UM729 (Stemcell Technology)).
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6

Isolation of CD34+ HSPC from Peripheral Blood

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Peripheral blood mononuclear cells were isolated from 50 mL of EDTA anti-coagulated peripheral blood from three healthy donors and ten CDA-I patients using Histopaque. The CD34+ HSPC were extracted with the Human CD34 Microbead Kit (Miltenyi Biotec), according to the manufacturer’s instructions. 1x105 frozen CD34+ HSPC were recovered into Phase I media of a three-phase protocol15 (link) (see Online Supplementary Figure S2A and the Online Supplementary Appendix) and monitored by cytospin (see the Online Supplementary Appendix) and FACS (Online Supplementary Table S1; Online Supplemental Figure S2).
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7

Isolation and Culture of CD34+ HSPCs

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Frozen CD34+ HSPCs derived from mobilized peripheral blood or cord blood were purchased from AllCells (Alameda, CA, USA) and thawed according to manufacturer’s instructions. Fresh CD34+ HSPCs from cord blood were acquired from donors under informed consent via the Binns Program for Cord Blood Research at Stanford University and used without freezing. Fresh CD34+ HSPCs from bone marrow were obtained from Stanford BMT Cell-Therapy Facility after informed consent. CD34+ cells were isolated using a human CD34 MicroBead Kit (Miltenyi Biotec, San Diego, CA, USA). Generally, CB-derived HSPCs perform better in HR experiments. CD34+ HSPCs were cultured in stem cell retention media consisting of StemSpan SFEM II (Stemcell Technologies, Vancouver, Canada) supplemented with SCF (100 ng/ml), TPO (100 ng/ml), Flt3-Ligand (100 ng/ml), IL-6 (100 ng/ml), UM171 (Stemcell Technologies) (35 nM) and StemRegenin1 (0.75 mM). Mycoplasma contamination testing was not performed. Cells were cultured at 37°C, 5% CO2, and 5% O2.
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8

Isolation, Expansion, and Differentiation of CD34+ Hematopoietic Progenitors

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A Lymphoprep (STEMCELL Technologies) density gradient was used to isolate PB mononuclear cells (PBMC). CD34+ cells were isolated from PBMC using human CD34 MicroBead Kit and autoMACS Pro Separator (Miltenyi Biotec), according to the manufacturer’s instructions. CD34+ were pre-stimulated for 24 hours (h) and transduced with 1-hit of LV at MOI 100 overnight, as previously described.22 (link),23 (link) Hematopoietic progenitor cultures were performed plating 2,500 cells in 2.5 mL MethoCult H4434 Classic methylcellulose-based medium (STEMCELL Technologies) and cultured for 12 days.
After transduction, cells were expanded using UM171 compound until day 7, as previously described.19 (link) A fraction of expanded cells was differentiated in vitro towards the myeloid lineage for 1 week and then into osteoclasts for 2 or 3 weeks on plastic wells or bone slices (Immunodiagnostic Systems), as previously described.14 (link)
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9

Isolation and Characterization of Aortic Cell Populations

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The dorsal aortas were dissected from human embryos CS15-16 (N = 2) then further bisected into ventral and dorsal portions (AoV and AoD respectively). Tissues were dissociated into single cells in 1mg/ml Collagenase-Dispase (Roche) and 0.12 mg/ml of DNase I (Roche) for 35 min in a 37°C rotating water bath and stained with conjugated antibodies anti-human VE-Cadherin-PE (Beckman Coulter, 5μg/ml), anti-human CD45 –v450 (Clone: HI30, BioLegend, RRID:AB_1645574, 6μg/ml) and anti-human CD235A – APC (BD Bioscience, RRID:AB_398499, 0.2μg/ml) for 1 hour at 4°C. Dead cells and erythroid cells were excluded by 7AAD and CD235A staining respectively. VC+CD45-, VC+CD45+ and VC-CD45+ populations were sorted using a FACS Aria-II (BD Bioscience) into Eppendorf tubes containing RLT buffer from the RNeasy Micro kit ready for RNA purification. Data acquisition and analysis was performed using FlowJo software (Tree Star).
For the 10X single cell sequencing, following AoV cell dissociation, CD34+ cells were isolated using the human CD34 MicroBead Kit and LS MACS Columns (both Miltenyi Biotec). This procedure was carried out as per the manufacturer’s guidelines.
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10

Purification of Human CD34+ Cells

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Human CB was purchased from the New York Blood Center. The purification of CD34+ cells was described previously23 (link). Briefly, white blood cells were separated from other types of blood cells by centrifugation. After the wash, CD34+ cells were magnetically labeled with CD34+ MicroBeads and then were separated using MACS column. Human CD34+ MicroBead kit was purchased from Miltenyi Biotec Company.
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