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34 protocols using ethoxyresorufin

1

Cytochrome c Enzymatic Assays in Cells

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Cytochrome c (cyt c) (horse heart), glucose-6-phosphate (G6P), glucose-6-phosphate dehydrogenase (G6PD), nicotinamide-adenine dinucleotide phosphate (NADPH), ethoxyresorufin, methoxyresorufin, resorufin, coumarin, 7-hydroxy coumarin, 3-cyano-7-ethoxycoumarin, 3-cyano-7-hydroxycoumarin, fluorescein, trypsin, penicillin-streptomycin (10,000 units penicillin and 10 mg streptomycin per mL), Dulbecco’s Modified Eagle’s Medium-low glucose (DMEM), fetal bovine serum (FBS), phosphate buffered saline pH 7.4 (PBS) and doxorubicin were obtained from Sigma Aldrich (St. Louis, MO, USA). Nicotinamide adenine dinucleotide phosphate (NADP+) was obtained from Gerbu (Heidelberg, Germany). Bradford reagent was obtained from Bio-Rad (Hercules, CA, USA) and Quiazol from Qiagen (Hilden, Germany). Dibenzylfluorescein, sodium dithionite, dimethyl sulfoxide (DMSO), acetonitrile (ACN) and sodium hydrogencarbonate (NaHCO3) were purchased from Merck (Kenilworth, NJ, USA). Insulin was obtained from Cell Applications, Inc. (San Diego, CA, USA). All other chemicals and solvents were of the highest grade commercially available.
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2

Evaluating CYP1A1 Activity in Keratinocytes

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For measuring CYP1A1 activities in living monolayer keratinocyte cultures, ethoxyresorufin (Sigma-Aldrich; solved in DMSO) was employed according to a protocol described by [37 (link)]. Resorufin as the reaction product in the respective media or assay solution was used to generate standard curves. Shortly, serum-free media containing 2.5µM ethoxyresorufin and 10µM dicumarol were applied to PBS-washed monolayer cells and resorufin formation kinetics were measured 21 min at 37°C at excitation and emission wavelength of 544 nm and 590 nm on a Fluoroskan Ascent reader (Labsystems, Bornheim, Germany). Cells were treated for 24h with PP2, BaP and/or MNF as indicated. All experiments were carried out three times in triplicate.
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3

Zinc Oxide Nanoparticle Assays

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Suspensions of n-ZnO (mean particle size 35 nm), reduced glutathione (GSH), bovine serum albumin, phenylmethylsulfonyl fluoride (PMSF), 5,5′-dithio-bis(2-nitrobenzoic acid) (DTNB), nicotinamide adenine dinucleotides (NADH, NAD, NADPH), EDTA, dihydrorhodamine, Hoescht 33342 dye, 2,4-Dinitrophenylhydrazine, tyrosin, hemoglobin, chymotrypsinogen, cytohrome c, myoglobin, ubiquitin, Sephadex G-50, β-mercaptoethanol, ethoxyresorufin, certified reference material ERM-BB422 and Lactobacillus leichmannii D-Lactate dehydrogenase were purchased from Sigma Chem. Co. (St. Louis, USA). All other chemicals were obtained from the Synbias (Kyiv, Ukraine), Bayer (Kyiv, Ukraine) and Balkanpharma-Dupnitsa (Dupnitsa, Bulgaria) commercial suppliers. All reagents were of the analytical grade or higher.
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4

Quantification of Acetaminophen Metabolites

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APAP, APAP-d4, APAP glucuronide, APAP sulfate, 2-benzoxazolinone, chlorzoxazone, ethoxyresorufin, and protease type XIV enzyme were purchased from Sigma-Aldrich (St. Louis, MO). APAP-d3 glucuronide and APAP-d3 sulfate were from Santa Cruz Biotechnology (Dallas, TX). APAP-cysteine was purchased from Toronto Research Chemicals (North Rock, Canada). 6-Hydroxychlorzoxazone and resorufin were purchased from Cayman chemicals (Ann Arbor, MI) and Life Technologies (Eugene, OR), respectively.
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5

Synthesis and Characterization of AαC Metabolites

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AαC was purchased from the Toronto Research Chemicals (Toronto, ON, Canada). [4b,5,6,7,8,8a-13C6]AαC was a gift from Dr. Daniel Doerge, National Center for Toxicological Research (Jefferson, AR). Human liver microsomes were obtained from the Tennessee Donor Services, Nashville, TN, and kindly provided by Prof. F. P. Guengerich, Vanderbilt University. DMSO, ethoxyresorufin, methoxyresorufin, methanol, acetonitrile, ascorbic acid, hydrochloric acid, ammonium acetate, sulfatase from Helix pomatia (≥10,000 units/g solid) and β-Glucuronidase from Helix pomatia (≥30,000 units/g solid) were purchased from Sigma Aldrich (St. Louis, MO, USA). AαC-3-OH and AαC-6-OH were prepared with human liver microsomes or rat liver microsomes and spectroscopically characterized as previously reported.17 (link),34 (link)N-(deoxyguanosin-8-yl)-2-amino-9H-pyrido[2,3-b]indole (dG-C8-AαC) and [13C10]-dG-C8-AαC were prepared as previously described.27 (link)
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6

Tobacco Carcinogen Metabolite Quantification

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NNK, [13C6]NNK, [CD3]-O6-mG, and [4-CD2,CD3]NNAL-O-Gluc were purchased from Toronto Research Chemicals (Toronto, ON). NNAL and [13C6]NNAL were synthesized from NNK or [13C6]NNK via sodium borohydride reduction.10 (link) (±)-DHM and (±)-DHK were synthesized in house with a slight modification of a reported procedure.25 AIN-G powdered diet was purchased from Harlan Teklad (Madison, WI). Recombinant β-glucuronidase was purchased from Sigma-Aldrich (St. Louis, MO). Ethoxyresorufin was purchased from Sigma-Aldrich. NADPH was purchased from RPI (Mount Prospect, IL). The qPCR primers were purchased from IDT (Coralville, IA), and the sequences are as follows: Gapdh, 5′-AACTTTGGCATTGTGGAAGG-3′ (sense) and 5′-ACA-CATTGGGGGTAGGAACA-3′ (antisense); Ahr, 5′-AGCCGGTGC-AGAAAACAGTAA-3′ (sense) and 5′-AGGCGGTCTAACTCTGT-GTTC-3′ (antisense); Cyplal, 5′-GGTTAACCATGACCGGGA-ACT-3′ (sense) and 5′-TGCCCAAACCAAAGAGAGTGA-3′ (antisense); Cyp1a2, 5′-TGGAGCTGGCTTTGACACAG-3′ (sense) and 5′-CGTTAGGCCATGTCACAAGTAGC-3′ (antisense). All other chemicals or solvents were purchased from either Fisher Scientific (Fairlawn, NJ) or Sigma-Aldrich, unless stated otherwise.
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7

Cytotoxicity and Oxidative Stress Analysis

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Aflatoxin B1 (AFB1), sodium azide (NaN3), phenylmethylsulfonyl fluoride (PMSF), resorufin, ethoxyresorufin, methoxyresorufin, erythromycin, phorbol 12-myristate 13-acetate (PMA), dihydrorhodamine 123 (DHR), and lipopolysaccharides (LPS) were obtained from Sigma Aldrich Corp (St. Louis, MO, USA). 2-Amino-3,4 dimethylimidazo [4,5-f] quinolone (MeIQ), 2-aminoanthracene (2-AA), and 2-(2-furyl)-3-(5-nitro-2-furyl)-acrylamide (AF-2) were provided by Wako Pure Chemicals (Osaka, Japan). Furthermore, 6-hydroxy-2,5,7,8-tetramethylchroman-2-carboxylic acid (Trolox) were acquired from Merck (Darmstadt, Germany). Collagenase type IV and 4′-6-diamidino-2-phenylindole (DAPI) were bought from the Gibco/Invitrogen Corp (Waltham, MA, USA). Fetal bovine serum (FBS), Dulbecco’s Modified Eagle Medium (DMEM) and Roswell Park Memorial Institute (RPMI) medium were purchased from Thermo Fisher Scientific Inc. (Waltham, MA, USA). All standard phytochemicals were of high-performance liquid chromatography (HPLC) grade, and all other chemicals were of analytical grade.
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8

Evaluation of Xylopic Acid's Effect on CYPs

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Phenobarbitone, ketoconazole, CYP450 isoenzymes, potassium phosphate dibasic, potassium phosphate monobasic, bovine serum albumin (BSA), nicotinamide adenine dinucleotide phosphate (NADPH), ethoxyresorufin, methoxyresorufin, pentoxyresorufin, benzyloxyresorufin, dextromethorphan, diclofenac, zinc sulphate heptahydrate, trimethylamine, and acetonitrile used to evaluate the effect of xylopic acid on CYPs were all obtained from Sigma-Aldrich Chemie GmbH (Eschenstrasse), Germany. XA was purified following the procedure described by Biney et al. [24 ].
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9

Serum Enzyme Activity Assay in Rats

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The ALT and AST activity in serum of rats were determined using commercial kits produced by BioMar (Gliwice, Poland). Normal and pathological serum were used for quality control. Cytochrome P450 1A (CYP1A) subfamily in mammals consists of 2 isoforms, CYP1A1 and CYP1A2. Activity of the enzymes in liver of rats was measured using the kinetic method described by Dey et al. [26 (link)] and Zamaratskaia et al. [27 (link)] with ethoxyresorufin (CAS #5725-91-7, Sigma-Aldrich #46121-5MG-F, Saint Louis, USA) and methoxyresorufin (CAS #5725-89-3, Sigma-Aldrich #69125-5MG, Saint Louis, USA) as reagents. The fluorescence of both enzymatic reactions was measured at 535 nm and 590 nm as excitation/emission wave lengths, protein concentration was analyzed with Bradford reagent. Bovine serum albumin was used as standard.
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10

Comprehensive Assay Protocol for Hepatic Function

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DAS, thioacetamide, ethoxyresorufin, methoxyresorufin, pentoxyresorufin, benzyloxyresorufin, resorufin, p-nitrophenol, erythromycin, glucose 6-phosphate, NADPH, glucose 6-phosphate dehydrogenase and the kits for alanine aminotransferase (ALT) and aspartate aminotransferase (AST) assays were purchased from Sigma Chemical Company (St. Louis, MO, USA). The primary antibodies against individual CYP proteins were purchased from Easy-bio system (Seoul, Korea). Earle's balanced salt solution (EBSS) and guinea pig complements were purchased from GIBCO (Grand Island, NY, USA). Sheep red blood cells (SRBCs) were obtained at the College of Natural Resources at Yeungnam University. All other chemicals were of reagent grade commercially available and used as received.
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