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Gene specific primer sets

Manufactured by Bioneer

Gene-specific primer sets are laboratory tools designed to amplify specific regions within a gene of interest. These primer sets contain short, single-stranded DNA sequences that serve as the starting points for DNA synthesis during the polymerase chain reaction (PCR) process. They are used to selectively target and replicate specific genetic sequences for various molecular biology applications.

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3 protocols using gene specific primer sets

1

Robust RNA Extraction and qPCR Analysis

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Example 10

Total RNA was extracted from cells and murine tissues using an RNeasy RNA extraction Mini-Kit (Qiagen). cDNA was synthesized using an Enzynomix kit (Enzynomix) and quantitative PCR was performed using gene-specific primer sets (Bioneer, Daejeon, Korea) and SYBR Green PCR Master Mix (Roche). Real-time PCR was performed using a Rotor-Gene Q instrument (Qiagen) according to the manufacturer's instructions. Data were normalized against gapdh expression. Relative expression was calculated using a delta-delta CT method. The sequences of the primers used are listed in Table 1.

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2

Quantitative RNA Expression Analysis

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Total RNA was isolated from cells or 1 mg of mice tissues using RNeasy Mini Kit (Qiagen). Complementary DNA (cDNA) synthesis was performed using reverse transcriptase (TOYOBO), followed by qPCR using gene‐specific primer sets (Bioneer) and QuantiTect SYBR Green PCR Kit (TOYOBO) according to the manufacturer's protocol on a Rotor‐Gene Q (Qiagen). The sequences of the primers used in qPCR are listed in Appendix Table S5.
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3

Gene Expression Analysis of Immune Markers

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Total RNA was extracted from cells using an RNeasy RNA extraction Mini‐Kit (Qiagen). cDNA was synthesized using an Enzynomix kit (Enzynomix), and quantitative PCR was performed using gene‐specific primer sets (Bioneer) and SYBR Green PCR Master Mix (Roche). Real‐time PCR was performed using a QuantStudio™ 3 (ABI), according to the manufacturer’s instructions. Data were normalized to the expression of β‐actin. Relative expression was calculated using the delta–delta Ct method. The sequences of the primers were as follows: mCD86 (Forward: gcacgtctaagcaaggtcac; Reverse: catatgccacacaccatccg), miNOS (Forward: ccccgctactactccatcag; Reverse: ccactgacacttcgcacaaa), mCD163 (Forward: tgtgaccatgctgaggatgt; Reverse: ctcgaccaatggcactgatg), mArg1 (Forward: ctgagctttgatgtcgacgg; Reverse: tcctctgctgtcttcccaag), mβ‐Actin (Forward: aagtgtgacgttgacatc; Reverse: gatccacatctgctggaagg).
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