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21 protocols using cell cycle and apoptosis detection kit

1

Cell Cycle Analysis of AC16 Cells

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AC16 cells were seeded in 6‐well culture plates and grown to 90% confluence. Cells were collected and fixed in 75% ethanol at 4°C overnight. The fixed cells were collected by resuspension and centrifugation. The cells were then stained using the Cell Cycle and Apoptosis Detection Kit (Beyotime) according to the manufacturer's protocol. The data were analyzed using ModFit software.
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2

Apoptosis Detection in TE1 Cells

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TE1 cells were plated into 24-well plates at 50,000 cells per well and treated with the indicated chemical drugs or DMSO after attachment. Cell apoptosis was detected using a Cell Cycle and Apoptosis Detection Kit (C1052; Beyotime Institute of Biotechnology, China). After cells were treated for three days, they were trypsinized, centrifuged, washed, and fixed with cold 70% ethanol at 4 °C overnight. Then, the fixation solution was removed, and the cells were incubated at 37 °C for 30 min in a solution containing propidium iodide and RNase A. Then the treated cells were analyzed using a FACScan flow cytometer (BDFACSCalibur, USA) and 10,000 cells were collected per sample. The data were analyzed using FlowJo 10.0 software (TreeStar, USA) with two or three replicates per sample, and each sample was analyzed independently three times.
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3

Cell Cycle and Apoptosis Analysis

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Cell cycle and apoptosis were analyzed by cell cycle and apoptosis detection kit (Beyotime, Shanghai, China). In short, Y-79 and SO-RB50 cells were harvested after digested with trypsin (Thermo Fisher Scientific), and cells were washed with cold phosphate buffered solution (PBS). Then, cells were suspended in PBS, following were centrifuged. Cells were subsequently fixed with 70% anhydrous ethanol for 30 min. Cells were centrifuged and supernatant was removed. Dye buffer, propidium iodide (PI) and RNase A were added and were incubated with cells at 37°C for 30 min. Samples were assessed by flow cytometry (BD Biosciences, San Diego, CA, United States).
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4

Cell Cycle and Apoptosis Analysis in 293T Cells

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Cell cycle and cell death were measured using Cell Cycle and Apoptosis Detection Kit (Beyotime; catalog no.: 1052), according to the manufacturer’s instructions. Briefly, transfected 293T cells were grown on a well in a 6-well plate for 36 h. Cells were washed with cold PBS, fixed in 70% ethanol, and stored at 4 °C for subsequent cell cycle analysis. Fixed cells were washed with PBS once and then resuspended in 1 ml of propidium iodide staining reagent. Samples were incubated in the dark for 30 min before cell cycle analysis. The distribution of cells in the cell cycle was measured by flow cytometer (BD FACSCalibur), and quantitation of cell cycle distribution was performed using Multi-cycle Software (ModFit software). The percentage of cells in the G1, S, and G2 phases and cell death was calculated.
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5

Cell Cycle and Apoptosis Analysis with Flow Cytometry

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Following the instructions, cell cycle and apoptosis detection kit (Beyotime, China) were used for cell cycle and apoptosis measurement. For cell cycle detection, cells were then re-suspended in PI staining solution for 30 min at 37 °C. For apoptosis detection, cells were stained with 5 μM Annexin V-FITC at 4 °C for 15 min, fixed in 70% ethanol overnight at 4 °C and then washed by PBS. The cells were then re-suspended in PI staining solution for 30 min at 37 °C. FACSCalibur flow meter with CellQuest software 3.2 (BD Biosciences) was used for data analysis.
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6

Cell Cycle Analysis by Flow Cytometry

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Flow cytometry was used to detect the proportion of cells in each cell cycle phase using the Cell Cycle and Apoptosis Detection kit (Beyotime) according to the manufacturer’s instructions. ICP1 cells were transfected with plasmid DNA (pCMV-HA-
CDKN3, pCMV-HA) or siRNA (si-
CDKN3 or si-NC). Forty-eight hours later, the cells were harvested and fixed in 70% ethanol at –20°C overnight. After removal of the fixation medium by centrifugation at 266
g, 500 μg of propidium iodide staining solution (Beyotime) was added to the pelleted cells. The mixture was incubated at 37°C for 30 min. Red fluorescence was observed with a flow cytometer (Beckman Coulter, Brea, USA) at an excitation wavelength of 488 nm.
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7

Apoptosis Pathway Regulation in H. pylori

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Caspase-3 inhibitor II (Z-DEVD-FMK) was purchased from Calbiochem. Terminal deoxynucleotidyl transferase mediated dUTP nick end labeling (TUNEL) was purchased from Roche. SYBR Green real-time polymerase chain reaction (PCR) master mix was purchased from TaKaRa (Shiga, Japan). The universal type SP kit and DAB kit were purchased from ZSGB-BIO. The Annexin V-FITC apoptosis detection kit and the cell cycle and apoptosis detection kit were purchased from Beyotime Biotechnology. The plasmids (GV230 and GV230-CDH1) were designed and synthesized by Shanghai Genechem Co., Ltd. The monoclonal antibody directed against the E-cadherin cytoplasmic domain (clone 36) was purchased from Transduction Laboratories (Lexington, KY). The polyclonal antibodies directed against H. pylori were purchased from Abcam (ab187301). The polyclonal antibodies directed against pro-caspase-3, caspase-3 (active), Bcl-2, and Bax were purchased from Sangon Biotech. The monoclonal antibody directed against GAPDH was purchased from Beyotime Biotechnology. HRP-anti-mouse antibody and HRP-anti-rabbit antibody were purchased from Boster Biological Technology. Cy3-labeled donkey anti-mouse antibody was purchased from Sangon Biotech.
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8

Comprehensive Cell Cycle and Apoptosis Analysis

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Cell cycle and apoptosis of cells were detected by BD FACS Canto II. Apoptosis was detected with APC Annexin V Apoptosis Detection Kit (eBioscience) with 7-AAD according to Manufacturer's instructions. Cell cycle of cells was detected with Cell cycle and apoptosis detection kit (Beyotime).
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9

Mitochondrial Function and Cell Cycle Assays

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The mitochondrial membrane potential assay kit with JC-1 (catalog no. C2006), and the cell cycle and apoptosis detection kit (catalog no. C1052) were purchased from Beyotime Institute of Biotechnology (Haimen, China). Ethidium bromide (catalog no. E8751), dimethyl sulfoxide (DMSO) and MTT were purchased from Sigma-Aldrich (EMD Millipore, Billerica, MA, USA). Acridine orange (catalog no. 1AB10220) was purchased from Ding Guo Changsheng Biotechnology Co., Ltd. (Beijing, China). The novel tumstatin was designed by Laboratory of Chemistry and Molecular Biology Institute of Frontier Medical Sciences, Jilin University (Changchun, China) and synthesized by GL Biochem Ltd. (Shanghai, China), with a purity of 98%. Carmustine (catalog no. 1407011) was purchased from Jinyao Pharmaceutical Co., Ltd. (Tianjin, China; serial number).
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10

Triptolide Chemical Analysis and Apoptosis Detection

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Triptolide was purchased from various commercial sources, including Tansoole and Meilunbio. All general chemicals were purchased from Adamas‐beta or Energy Chemical in the highest purity available and were used without further purification. The cell cycle and apoptosis detection kit, the total cell lysates (C1062L, Beyotime), the BCA protein concentration assay Kit, and the TUNEL cell apoptosis detection kit were purchased from Beyotime Biotechnology. The synthesized compounds were analyzed using a Bruker 400 MHz nuclear magnetic resonance (NMR) spectrometer. High‐resolution mass spectra (HRMS) were recorded using a ZAB‐HS spectrometer with electrospray ionization (ESI). High‐performance liquid chromatography (HPLC) analysis was performed using a Hanbo Sci&Tech NS4201 system equipped with an NU3000 serial UV/Vis detector and two NP7000 serial pumps. The binding affinity was investigated using a Biacore T200 SPR instrument (Cytiva, Sweden). The degrees of apoptosis and cell cycle progression were detected using a NovoCyte3130 flow cytometer (ACEA). Imaging was performed using confocal laser‐scanning microscopy (Nikon A1R).
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