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7 protocols using stem cell factor (scf)

1

Expansion of Frozen Human CD34+ HSPCs

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Frozen human UCB CD34+ HSPCs were purchased from StemCell Technologies (Vancouver, BC, Canada) and used as provided (passage number 1). The CD34+ cell purity in the HSPCs was determined to be 98% by flow cytometry, and the viability was determined to be >97% by trypan blue staining.
CD34+ HSPCs were cultured in StemSpan SFEM II expansion medium (StemCell Technologies) with 100 ng/ml SCF (ProSpec, Rehovot, Israel), 100 ng/ml Flt-3L (ProSpec), 50 ng/ml TPO (ProSpec), 20 ng/ml IL-3 (ProSpec), and 20 ng/ml IL-6 (ProSpec). The initial inoculum and maintenance densities were 5 × 104 and 1 × 106 cells/ml, respectively. Culture media were exchanged with fresh media at one-half volume of the initial media every 3 days, and the cultures were maintained at 37°C in a humidified atmosphere containing 5% CO2.
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2

Culturing Primary Hematopoietic Cells

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Primary Ph+ ALL bone marrow cells were kindly provided by Dr Michael Caligiuri (Ohio State University, Columbus, OH) and Dr Martin Carroll (University of Pennsylvania, Philadelphia, PA). Cells were seeded on a substrate of adherent, mitomycin C-treated OP9 stromal cells and maintained in SFEM (Stem Cell Technology, Vancouver, Canada) supplemented with IL-3 (10 ng/ml), IL-7 (10 ng/ml), FLT3L (20 ng/ml) and SCF (30 ng/ml) (ProSpec, Israel).
CD34+ CML cells were kindly provided by Dr Tessa Holyoake (University of Glasgow, United Kingdom) and cultured in SFEM supplemented with IL-3 (20 ng/ml), IL-6 (20 ng/ml), SCF, and thrombopoietin (10 ng/ml).
Commercially purchased (Stem Cell Technologies) cord blood CD34+ cells were cultured in SFEM (Stem Cell Technologies) enriched with the CC100 cytokine cocktail (SCF, 100 ng/ml; FLT3L, 100 ng/ml; IL-3, 20 ng/ml; IL-6, 20 ng/ml).
Ph+ and normal CD34+ primary cells were kept in culture at 37 °C, under a 5% CO2 humidified atmosphere. Cell counts were performed using 0.4% Trypan Blue Solution and a Neubauer hemocytometer.
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3

Hematopoietic Progenitor Cell Differentiation

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Day-8 differentiated cells were induced to generate CD45+ HPCs with StemPro-34 basal medium (Gibco) supplemented with 50 ng/ml TPO (PeproTech), 6 U/ml EPO (Prospec), 20 ng/ml SCF (Prospec), 20 ng/ml IL11 (PeproTech), 15 ng/ml IL6 (STEMCELL Technologies), 15 ng/ml IL3 (Sigma), 20 ng/ml GM-CSF (PeproTech), 20 ng/ml GCSF (PeproTech), and 20 ng/ml Flt-3L (PeproTech) for 4 days. Then, the cells were seeded in MethoCult™ semisolid medium for colony-formation assays (STEMCELL Technologies). The CFU-E colonies were counted on day 7, while the BFU-E colonies and other CFUs were counted on day 14 after seeding. Colonies were identified according to the manufacturer’s instructions.
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4

Antibody-based Signaling Pathway Analysis

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Antibodies used in this study are detailed in
Table 1. The different drug inhibitors used in the study are given in
Table 2. Hydrogen peroxide (H
2O
2) and the calcium chelator BAPTA-AM were purchased from Sigma (Steinheim, Germany). IGF-I and SCF were purchased from Prospec-Tany Technogene, (Israel).
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5

Culture and Maintenance of Ph+ Leukemia Cells

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Cell lines were tested for mycoplasma contamination (PCR Mycoplasma detection set, Takara Bio Inc., Japan) every 6 months. BV173 (CML- lymphoid blast crisis cell line) and SUP-B15 (Ph+ ALL cell line) cells were cultured in Iscove Modified Dulbecco’s Medium (Lonza Inc., Basel, Switzerland) supplemented with 10% heat-inactivated FBS, 1% penicillin- streptomycin, 1% L-glutamine, at 37°C, 5% CO2.
Primary Ph+ adult ALL (n=6) or CML-lymphoid blast crisis (n=1) cells derived from the peripheral blood (n=2) or the bone marrow (n=5) (average 77% blasts; range: 52–98%) were kindly provided by Dr Michael Caligiuri (Ohio State University, Columbus, OH) and Dr Martin Carroll (University of Pennsylvania, Philadelphia, PA) and were maintained in SFEM (Stem Cell Technology, Vancouver, Canada) supplemented with IL-3 (10 ng/ml), IL-7 (10 ng/ml), Flt3-L (20 ng/ml) and SCF (30 ng/ml) (ProSpec, Israel).
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6

Culture and Maintenance of Ph+ Leukemia Cells

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Cell lines were tested for mycoplasma contamination (PCR Mycoplasma detection set, Takara Bio Inc., Japan) every 6 months. BV173 (CML- lymphoid blast crisis cell line) and SUP-B15 (Ph+ ALL cell line) cells were cultured in Iscove Modified Dulbecco’s Medium (Lonza Inc., Basel, Switzerland) supplemented with 10% heat-inactivated FBS, 1% penicillin- streptomycin, 1% L-glutamine, at 37°C, 5% CO2.
Primary Ph+ adult ALL (n=6) or CML-lymphoid blast crisis (n=1) cells derived from the peripheral blood (n=2) or the bone marrow (n=5) (average 77% blasts; range: 52–98%) were kindly provided by Dr Michael Caligiuri (Ohio State University, Columbus, OH) and Dr Martin Carroll (University of Pennsylvania, Philadelphia, PA) and were maintained in SFEM (Stem Cell Technology, Vancouver, Canada) supplemented with IL-3 (10 ng/ml), IL-7 (10 ng/ml), Flt3-L (20 ng/ml) and SCF (30 ng/ml) (ProSpec, Israel).
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7

CD34+ Cell Expansion Assay

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Purified and fresh CD34+ cells were incubated with the early cytokines TPO, SCF, and FLT3L (ProSpec, East Brunswick, NJ, USA) at a concentration of 50 ng/mL. After three days in expansion medium, cells were harvested and evaluated for cell proliferation.
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