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Ripa lysis buffer

Manufactured by Takara Bio
Sourced in China, Japan

RIPA lysis buffer is a detergent-based buffer solution used for the extraction and solubilization of proteins from cells and tissues. It contains a combination of ionic and non-ionic detergents that help to disrupt cell membranes and release proteins into solution. The buffer also includes other components that help to stabilize and preserve the proteins during the extraction process.

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20 protocols using ripa lysis buffer

1

TMEM98 Protein Expression Analysis

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FaDu and HSC-3 cells were lysed using RIPA lysis buffer (TaKaRa, Beijing, China), and protein concentrations were determined using a bicinchoninic acid protein assay kit (Keygen, Nanjing, China). Proteins were separated using 10% sodium dodecyl sulfate-polyacrylamide gel electrophoresis and then electrophoretically transferred to a methanol-activated polyvinylidene fluoride (PVDF) membrane. Membranes were blocked with skimmed milk for 1 h at room temperature and then incubated with an anti-TMEM98 antibody (diluted 1:1000; Proteintech) at 4° C overnight. The next day, the membrane was rinsed three times with TBST, incubated with the secondary antibody for 1 h at room temperature, and immunocomplexes were visualized using ECL plus western blotting detection reagents (Keygen, Nanjing, China).
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2

Extracellular Vesicle Protein Profiling in Cardiac and Mesenchymal Cells

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Total protein was extracted from H9c2 cells and MSCs-exosomes by
radio-immunoprecipitation assay (RIPA) lysis buffer (TaKaRa, Japan) with
protease inhibitors (Roche, China). The concentrations of proteins were detected
by a bicinchoninic acid (BCA) protein assay kit (Pierce, Netherlands). Sodium
dodecyl sulphate-polyacrylamide gel electrophoresis (SDS-PAGE) was used to
separate equal quantities of total proteins (20 μg per lane), and then separated
proteins were transferred onto polyvinylidene difluoride membrane (Millipore,
MA, USA). Membranes were blocked by PBS-5% fat-free dried milk at room
temperature for 1 h and then incubated at 4 ℃ overnight with anti-CD63
(1:1,000), anti-YAP (1:2,000), anti-phosphor (p)-YAP (1:2,000), anti-tafazzin
(TAZ) (1:2,000), anti-caspase 3 (1:1,000), anti-B-cell lymphoma-2 (Bcl-2)
(1:2,000), anti-Bax (1:1,000), and anti- glyceraldehyde-3-phosphate
dehydrogenase (GAPDH) (1:3,000) (Abcam, UK). Then, the goat anti-rabbit
horseradish peroxidase-conjugated secondary antibody was incubated with
membranes for 2 h. Protein bands were visualized by ChemiDoc XRS+ system
(Bio-Rad, CA, USA).
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3

Western Blot Analysis of Protein Expression

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RIPA lysis buffer (Takara Biotechnology, Dalian, China) was used to isolate total proteins from cells. Totally 20 μg of proteins were isolated by 12% sodium dodecyl sulfate–polyacrylamide gel electrophoresis and transferred onto polyvinylidene fluoride membranes (Millipore Corp., Billerica, MA, USA). After blocked in TBS buffer containing 5% skim milk (50 mmol/l NaCl, 10 mmol/l Tris, pH7.4), the membranes were washed with TBST three times for 5 min each time and incubated with primary antibodies at 4 ℃ overnight. Primary antibodies were DNMT1 (Abcam, UK), OTUD4 (Abcam, UK) and GAPDH Abcam, UK). Then, the membranes were incubated with horseradish peroxidase-conjugated secondary antibody (Santa Cruz Biotechnology) at room temperature for 1 h. At last, immunoreactive proteins were treated with enhanced chemiluminescence reagent (Amersham, Little Chalfont, UK) and protein bands were analyzed using Amersham Imager 600 system (GE Healthcare Life Sciences, Shanghai, China).
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4

Western Blot Analysis of Protein Targets

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Total protein was extracted from cells using RIPA lysis buffer (Takara Bio, Inc.) according to the manufacturer's instructions, and the protein concentration was quantified using a bicinchoninic acid protein assay kit. A total of 15 µg protein per lane was separated by 10% SDS/PAGE and then transferred onto a polyvinylidene fluoride membrane. The membrane was incubated with blocking buffer (1X TBS, 0.1% Tween-20, 5% non-fat dry milk) for 2 h at room temperature and then with the appropriate primary antibody overnight at 4°C. The following primary antibodies were used: Anti-UBR5 (1:1,000, cat. no. ab70311, Abcam), anti-Bax (1:1,000, cat. no. ab32503, Abcam), anti-Bcl-2 (1:1,000, cat. no. ab185002, Abcam), anti-p38 (1:1,000, cat. no. ab170099, Abcam), anti-phosphorylated (p)-p38 (1:1,000, cat. no. ab178867, Abcam), and anti-β-actin (1:1,000, cat. no. ab115777, Abcam) antibody. The membrane was then incubated with secondary antibody for 2 h at room temperature. Protein bands were visualized using ECL plus western blotting detection reagents (BD Biosciences) and detected with an enhanced chemiluminescence kit.
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5

Western Blot Analysis of HK3 Protein

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Total protein was extracted from cells using RIPA lysis buffer (TaKaRa) according to the manufacturer's instructions. Proteins in lysates were determined using the bicinchoninic acid (BCA) assay and 10% SDS-PAGE and then transferred onto a polyvinylidene fluoride (PVDF) membrane. The membrane was incubated with blocking buffer for 2 h at room temperature and then with the primary antibody anti-HK3 (1:1000, ab1262173, Abcam) overnight at 4 °C. Then, the protein was visualized using ECL plus western blotting detection reagents (Biosciences) and detected with an enhanced chemiluminescence kit.
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6

Western Blot Analysis of Protein Expression

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Cell protein was extracted using RIPA lysis buffer (Takara) containing 1 nM PMSF (Invitrogen, Carlsbad, CA, U.S.A.) according to the manufacturer’s instructions. Then, 20 μg protein per well was electrophoresed in 10% SDS-PAGE gels and transferred onto PVDF membrane (Millipore, Bedford, MA, U.S.A.) and incubated with different primary antibodies, including anti-DEPDC1 (ab197246), anti-GAPDH (ab181603), anti-JNK (ab176645) and anti-p-JNK (ab107407) at 4°C overnight. The membrane was then incubated with HRP-labeled secondary at temperature for 2 h. The bands were detected using an ECL Western blotting kit (Invitrogen) and analyzed on a Gel Doc XR System (Bio-Rad Laboratories, Hercules, CA, U.S.A.).
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7

PFKFB3 Protein Expression Analysis

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Total protein was extracted from cells using RIPA lysis buffer (TaKaRa) according to the manufacturer's instructions, and the protein concentration was quantified using a bicinchoninic acid protein assay kit. Proteins were separated by 10% SDS/PAGE and then transferred onto a polyvinylidene fluoride membrane. The membrane was incubated with blocking buffer for 2 h at room temperature and then with the primary antibody anti‐PFKFB3 (Abcam, Cambridge, MA, USA) and Blotto overnight at 4 °C. Finally, the protein was visualized using ECL plus western blotting detection reagents (Biosciences, San Jose, CA, USA) and detected with an enhanced chemiluminescence kit.
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8

Investigating AGE-albumin and MAPK Regulation in Skeletal Muscle

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To validate relationship between AGE-albumin and mitogen-activated protein kinases (MAPK) in skeletal muscle, L6 cells were firstly exposed to 400 ng/ m sRAGE for 36 hrs with or without 800 μg/ m AGE-albumin for 48 hrs. Effects of sRAGE treatment to L6 cells in hypoxia and glucose deprivation were confirmed by immunoblotting. L6 lysates were isolated by RIPA lysis buffer (TaKaRa, Tokyo, Japan). Concentration of protein samples was measured using the Bicinchoninic acid (Thermo Scientific, Rockford, IL). Equal amounts of proteins (30 μg protein/lane) were separated by 8–12% sodium dodecyl sulfate polyacrylamide gel electrophoresis (SDS-PAGE) and then transferred to polyvinylidene fluoride (PVDF). PVDF membrane was incubated with appropriate diluted primary antibodies at 4 °C overnight. The membrane was washed with tris buffered saline with 1% tween 20 (TTBS) three times and incubated with secondary antibodies for 1 hr at room temperature. The primary and secondary antibodies are listed in Table S1. The blotting membrane was developed with enhanced chemiluminescence (ECL) on LAS-4000 (Fuji Film, Tokyo, Japan).
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9

Protein Extraction and Western Blot Analysis

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Total protein was extracted from cells using RIPA lysis buffer (TaKaRa) according to the manufacturer’s instructions. Proteins in lysates were determined using the bicinchoninic acid (BCA) assay and 10% SDS-PAGE and then transferred onto a polyvinylidene fluoride (PVDF) membrane. The membrane was incubated with blocking buffer for 2 h at room temperature and then with the primary antibody anti-CCND1 (1:1000, ab16663, Abcam) and and anti-CD31 (PECAM1/CD31; 1:1000, ab28364, Abcam) overnight at 4°C. Then, the protein was visualized using ECL plus western blotting detection reagents (Biosciences) and detected with an enhanced chemiluminescence kit.
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10

Western Blot Analysis of Nrf2 Pathway

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Bone tissues and MC3T3-E1 cells were processed for protein extraction using RIPA lysis buffer (Takara Bio, Inc.), and then quantified using a BCA assay kit (Bio-Rad Laboratories, Inc.). In brief, a total of 25 µg protein samples were separated via 10% SDS-PAGE, and separated proteins were then transferred onto PVDF membranes. After blocking with 5% skimmed milk at room temperature for 2 h, the membranes were incubated with primary antibodies against Keap-1 (1:1,000, ab227828, Abcam), CUL3 (1:1,000, ab75851, Abcam), Nrf2 (1:1,000, ab76026, Abcam), and GAPDH (1:2,000, ab8245, Abcam) overnight at 4°C, and the membranes were then washed with PBS and incubated with the appropriate HRP-conjugated secondary antibody (1:5,000; cat. no. 7074; Cell Signaling Technology, Inc.) at room temperature for 2 h. Finally, ECL solution was applied to bands to measure the protein expression levels with Tanon-5200 Chemiluminescence Imager (Tanon Science and Technology Co., Ltd.). The relative intensities of target proteins were analyzed using ImageJ software (version 1.48; National Institutes of Health) and normalized to GAPDH expression.
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