Following echocardiography, hearts were harvested as previously described [16 (link)]. Hearts were stained against: Rabbit
anti-mouse IBA1 (Novus Biologicals, CO) overnight at 4°C. After washing,
sections were incubated with secondary antibody conjugated to Alexa Fluor 488
(1:500, Invitrogen, Carlsbad, CA), then incubated with Sudan Black B (Sigma
Aldrich, St. Louis, MO) for 30 minutes and subsequently incubated with DAPI
nuclear counterstain. A similar protocol was used to prepare heart sections from
mice on baseline, day 7 and day 30 for capillary density assessment using FITC-
Isolectin B4 (FL1201, Vector Labs, Burlingame, CA). Apoptotic cells in heart
sections were identified at day 1 by terminal deoxynucleotidyl
transferase-mediated dUTP nick end-labeling (TUNEL) staining using the In-Situ
Cell Death Detection Kit and α-sarcomeric actin (1:200 dilution, Sigma
Aldrich, St. Louis, MO) according to the manufacturer’s protocol. DAPI
counterstaining was followed by a final PBS wash.10–15 adjacent
pre-infarct and remote zones per section were analyzed (1–2
sections/animal) at 40x magnification using Nikon Confocal Microscope A1 in the
University of Kentucky Confocal Microscopy facility.