All animal experiments were performed with approval from the Peter MacCallum Cancer Centre Animal Experimentation Ethics Committee. C57Bl/6 mice (Walter and Eliza Hall Institute, Parkville, VIC, Australia) were intravenously injected with 2 × 10
5 Eμ-
Myc B-lymphoma cells in PBS and treated with pharmacological inhibitors from 8 days post-injection. Treatment of mice was continued until an ethical end-point was reached; hunched posture, ruffled fur, enlarged lymph nodes, laboured breathing, weight loss greater than 20% of start body weight and limited mobility or paralysis.
For use
in vivo CX-5461 was prepared in 25 mM NaH
2PO
4 (pH4.5) and given by oral gavage at 30 mg/kg every three days.
AZD7762 (Medchem Express) was delivered intraperitoneally in 10.3% -hydroxypropyl-β-cyclodextrin in 0.9% saline at 20 mg/kg daily on weekdays.
Reverse transcription qPCR, Western blot analysis, ChIP, Immunofluorescence-fluorescent
in situ hybridisation (IF-FISH), psoralen crosslinking and chromatin accessibility by real time-PCR (CHART-PCR) assays were carried out as described previously [58 (
link), 59 (
link)]. A brief summary of these assays and lists of antibodies and primer sequences are provided in the Supplementary Data.
Quin J., Chan K.T., Devlin J.R., Cameron D.P., Diesch J., Cullinane C., Ahern J., Khot A., Hein N., George A.J., Hannan K.M., Poortinga G., Sheppard K.E., Khanna K.K., Johnstone R.W., Drygin D., McArthur G.A., Pearson R.B., Sanij E, & Hannan R.D. (2016). Inhibition of RNA polymerase I transcription initiation by CX-5461 activates non-canonical ATM/ATR signaling. Oncotarget, 7(31), 49800-49818.