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7 protocols using azd7762

1

Eμ-Myc Lymphoma Mouse Model

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All animal experiments were performed with approval from the Peter MacCallum Cancer Centre Animal Experimentation Ethics Committee. C57Bl/6 mice (Walter and Eliza Hall Institute, Parkville, VIC, Australia) were intravenously injected with 2 × 105 Eμ-Myc B-lymphoma cells in PBS and treated with pharmacological inhibitors from 8 days post-injection. Treatment of mice was continued until an ethical end-point was reached; hunched posture, ruffled fur, enlarged lymph nodes, laboured breathing, weight loss greater than 20% of start body weight and limited mobility or paralysis.
For use in vivo CX-5461 was prepared in 25 mM NaH2PO4 (pH4.5) and given by oral gavage at 30 mg/kg every three days. AZD7762 (Medchem Express) was delivered intraperitoneally in 10.3% -hydroxypropyl-β-cyclodextrin in 0.9% saline at 20 mg/kg daily on weekdays.
Reverse transcription qPCR, Western blot analysis, ChIP, Immunofluorescence-fluorescent in situ hybridisation (IF-FISH), psoralen crosslinking and chromatin accessibility by real time-PCR (CHART-PCR) assays were carried out as described previously [58 (link), 59 (link)]. A brief summary of these assays and lists of antibodies and primer sequences are provided in the Supplementary Data.
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2

Immune Cell Proliferation Assay

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Poly-2-hydroxyethyl methacrylate (polyHEMA, P3932) and propidium iodide (PI, P4170) were purchased from Sigma-Aldrich. The ERK inhibitor SCH772984 was purchased from SelleckChem (S7101). CFSE dye was purchased from Tonbo Biosciences (10140–976 VWR). The Wee1 inhibitor MK-1775 (HY-10993) and CHK1 inhibitor AZD-7762 (HY-10992) were purchased from MedChem Express.
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3

Restoring Phenotype of Ddb1-Deficient CD4+ T Cells

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Primary CD4+ T cells were cultured in RPMI-1640 medium supplemented with 10% FBS, HEPES (10 mM), sodium pyruvate (1 mM), β-mercaptoethanol (50 μM), penicillin, and streptomycin. Naïve CD4+ T cells were isolated from spleens and lymph nodes of 8-week-old WT and Ddb1fl/fl; OX40-cre mice, and cells were co-cultured with Antigen Presenting Cells (APC cells) in 96-well U bottom plate with soluble 1 μg/ml anti-mouse CD3 and 1 μg/ml anti-mouse CD28 antibodies. CD4+ T cells were activated for 0–6 days and harvested for flow cytometry analysis or western blotting.
Experiment to restore the phenotype of Ddb1 deficient activated CD4+ T cells and CD4+ T cells were treated with various inhibitors in CD4+ T-cell stimulation assay. Z-VAD (cat #HY-16658B), Z-IETD (cat #HY-101297), Ferrostatin-1 (cat # HY-100579), GSK872 (cat #HY-101872), Nec1 (cat # HY-15760), AZD7762 (cat # HY-10992), and Rabusertib (cat # HY-14720) were purchased from MedChemExpress; Nec-1s (cat #S8641) was purchased from Selleck.
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4

Inducing DNA Damage and Checkpoint Inhibition

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In our experiments, we treated CEOs and DOs with 10 μM or 40 μM bleomycin (Selleck) to induce DNA DSBs [14 (link)]. We used the checkpoint kinase inhibitor, AZD7762 (10 nM; MedChemExpress, China), to inhibit the activity of DNA-damage checkpoint protein, Chek1/2 [20 (link)]. In addition, for blocking the gap-junctions in COC, 200 μM carbenoxolone (CBX; Sigma Aldrich, USA) was used.
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5

High-throughput Screening of DNA Damage Response Inhibitors

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Cells were seeded in a 96-well plate at a density of 1,000 cells per well overnight. The next day, drugs including MK-1775, ceralasertib/AZD6738, CCT245737, AZD7762, prexasertib, CHIR-124 (all from MedChemExpress), Debio 0123, ZN-c3, VE-821, PD0166285, and VX-970 (all from Selleckchem) or DMSO was added. Cells were exposed to the drug for 10–15 days, and cell confluency or nuclei count was measured using an IncuCyte S3 (Sartorius).
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6

Antineoplastic Agents and Liposomal Formulations

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Reagents and solvents were purchased from Sigma-Aldrich (St. Louis, MO) and used without further purification, unless otherwise indicated. Water was purified by MilliQ filtration systems (Millipore) prior to experimental use. Trametinib (Tram), gemcitabine (Gem), and paclitaxel (PTX) were purchased from LC Laboratories (Woburn, MA). STEALTH liposomal doxorubicin HCl (Doxil) and DiI-labelled PEGylated DOPC/CHOL liposomes (Lip) were purchased from FormuMax (Sunnyvale, CA). Pharmacy-grade nanoparticulate albumin-bound paclitaxel (nab-PTX, trade name: Abraxane®; Celgene; Summit, NJ) was purchased form McKesson (Irving, Taxes). CFI400945 fumarate (CFI400945), AXL171746 (link), VX-745, AZD-7762, JNK-IN-8, AZD-1390, Bindarit, MK-8033, AS602801, cobimetinib, refametinib, MK-8353, SCH772984, A-769662, Compound C dihydrochloride (Compound C), and Linsitinib (Lin)47 (link) were all purchased from MedChemExpress (Monmouth Junction, NJ). RepSox, 7rh, Y-27632 dihydrochloride (Y-27632), and C 021 dihydrochloride (C021) were purchased from Tocris (Bristol, UK), Sigma, Abcam (Cambridge, MA), and R&D Systems (Minneapolis, MN), respectively. 5-(N-Ethyl-N-isopropyl)amiloride (EIPA) was purchased from Sigma-Aldrich.
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7

Lymphocyte Isolation and Protein Analysis

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RPMI medium 1640 and FBS were purchased from Life Technologies. Lymphoprep was purchased from StemCell. The bicinchoninic acid (BCA) and the Silver Staining assays were purchased from Pierce Biotechnology. SHP099 (HY-100388A), MDA, and AZD7762 were purchased from MedChemExpress (MCE).
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