The ABI 7500 Fast PCR System is a real-time PCR instrument designed for rapid and accurate nucleic acid amplification and detection. It features a fast thermal cycling mechanism and advanced optics for efficient fluorescence detection. The system is capable of performing standard and fast PCR protocols.
Total RNA in this study was isolated from cultured cells and tissues using Trizol reagent (Invitrogen, USA). Then, extracted RNAs were reverse-transcribed into cDNA by using Prime Script™ RT kit (Takara, Dalian, China). In addition, for miRNAs, MicroRNA Reverse Transcription Kit (Takara Biotechnology, Japan) were used to perform reverse transcription. The primers used in the current experiments were deigned and purchased from Geneseed Biomart (Guangzhou, China) (Table 1). qRT-PCR was carried out on ABI 7500 fast PCR System (Carlsbad, CA, USA) with a SYBR green PCR Master Mix (TOYOBO, Japan). GAPDH and U6 applied as internal references for mRNAs and miRNAs, respectively. The relative expressions were calculated with 2–ΔΔCT method. For RNase R treatment, 1 unit of RNase R was added to digest 1 μg of RNA for 15 min at 37 °C.
Huang G., Liang M., Liu H., Huang J., Li P., Wang C., Zhang Y., Lin Y, & Jiang X. (2020). CircRNA hsa_circRNA_104348 promotes hepatocellular carcinoma progression through modulating miR-187-3p/RTKN2 axis and activating Wnt/β-catenin pathway. Cell Death & Disease, 11(12), 1065.
TRIzol reagent (Beyotime, Shanghai, China) was used to extract total RNA. BeyoFast™ SYBR Green One-Step qRT‒PCR Kit (Beyotime) was used to detect targeting gene according to the manual. In addition, for miRNAs, MicroRNA Reverse Transcription Kit (Takara Biotechnology, Japan) were used to perform reverse transcription. qRT-PCR was carried out on ABI 7500 fast PCR System (Carlsbad, CA, USA) with a SYBR green PCR Master Mix (TOYOBO, Japan). β-actin and U6 applied as internal references for mRNAs and miRNAs. The relative expressions were calculated with 2–ΔΔCT method. Moreover, genomic DNA (gDNA) was extracted by a Universal Genomic DNA Purification Mini Spin Kit (Beyotime) based on the manufacturer’s protocol. All primers were synthesized by GenePharma (Shanghai, China) and are listed in Table S2.
Hu Z., Chen G., Zhao Y., Gao H., Li L., Yin Y., Jiang J., Wang L., Mang Y., Gao Y., Zhang S., Ran J, & Li L. (2023). Exosome-derived circCCAR1 promotes CD8 + T-cell dysfunction and anti-PD1 resistance in hepatocellular carcinoma. Molecular Cancer, 22, 55.
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