The largest database of trusted experimental protocols

Tcs sp8

Manufactured by Leica camera
Sourced in Germany, United States, Japan, United Kingdom, China, Canada, Italy

The Leica TCS SP8 is a high-performance confocal laser scanning microscope. It features a modular design, allowing for customization to meet specific research needs. The TCS SP8 provides advanced imaging capabilities, including multi-channel fluorescence detection and high-resolution image acquisition.

Automatically generated - may contain errors

2 528 protocols using tcs sp8

1

Choline, BFA, and 1-Butanol Effects on Arabidopsis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Before choline treatment, choline chloride was dissolved in water to make a 100-mM choline solution. In the experiment, the choline solution was diluted to a concentration of 1 mM, and the seedlings were treated for the desired time.
For BFA treatment, 6-day-old Arabidopsis seedlings were immersed in 50 μM BFA for 1.5 hours, and then the BFA bodies were observed by confocal laser scanning microscopy (Leica TCS SP8). In the washout experiments, the BFA-treated seedlings were incubated in water for 2 hours, after which the BFA bodies were examined by confocal laser scanning microscopy (Leica TCS SP8).
For CHX and BFA treatment, 6-day-old Arabidopsis seedlings were pretreated with 50 μM CHX for 30 minutes, followed by being immersed in a solution with 50 μM CHX and 50 μM BFA for 1.5 hours, and then the BFA bodies were observed by confocal laser scanning microscopy (Leica TCS SP8). In the washout experiments, above seedlings were incubated in water for 2 hours, and the BFA bodies were then examined by confocal laser scanning microscopy (Leica TCS SP8).
For 1-butanol treatment, the Arabidopsis seeds were grown on 1/2 MS salt medium plate for six days, and the seedlings were then transplanted to the 1/2 MS salt medium plate containing 0.4% 1-butanol and grew for another five days. The root length was measured by Image J.
+ Open protocol
+ Expand
2

Quantifying Pavement Cell Morphology

Check if the same lab product or an alternative is used in the 5 most similar protocols
Samples were imaged using a Leica TCS SP8 laser scanning confocal microscope and Spinning disk confocal microscope. Images were obtained with ×25 objective for propidium iodide (PI) staining and ×40 and ×60 objective for microtubule labelling. For the microtubule labelling, maximum Z-projections were used and the Z-step size was 1 μm. Images were captured by a Leica TCS SP8 at 488 and 561 nm laser excitation and 500–550 nm and 590–630 nm emission for GFP and PI staining. Images captured by a spinning disk confocal microscope were obtained with ×40 and ×60 objective. For the microtubule labelling, maximum Z-projections were used and the Z-step size was 1 μm. Images were captured at 488 nm laser excitation and 500–550 nm emission.
PI (5 μg ml−1)-stained cotyledon pavement cells from 7-day-old seedlings were imaged. ImageJ software was used to measure the lobe number, lobe length, neck width, perimeter, and area (http://rsb.info.nih.gov/ij). Circularity was analysed according to Zhang et al. (2011) (link).
Microtubule alignment was quantified according to Gomez et al. (2016) . At least 50 cells were used. The values were recorded and the significance was analysed using Student’s paired t-test.
+ Open protocol
+ Expand
3

Subcellular Localization of GGL Proteins

Check if the same lab product or an alternative is used in the 5 most similar protocols
The constructs of UBQ10-GGL-GFP or 35S-GGL-YFP were transformed into the Agrobacterium strain GV3101, and the strains were infiltrated into N. benthamiana leaf epidermis. Protoplasts of infiltrated tobacco leaves were prepared as described previously (Walter et al., 2004 (link)). Images were obtained by a confocal microscope (TCS-SP8; Leica, Weztlar, Germany) with a 40× water-immersion objective in the sequential scan, between frames mode. For localization in ER, an ER-marker HDEL-OFP (orange fluorescent protein; excitation at 561nm, emission range is 580nm to 630nm) was coexpressed for co-localization. Nile Red staining was performed for localization in lipid droplets, as described in our previous publication (Tang et al., 2020 (link)).
To confirm the subcellular localization of GGL13, GGL17, and GGL27 in Arabidopsis, GGL13-GFP, GGL17-GFP, or GGL27-GFP was transformed into Arabidopsis mesophyll protoplasts with HDEL-OFP (Yoo et al., 2007 (link)), respectively. The GFP and OFP signals of protoplasts were recorded 10–12h after transformation under a confocal microscope (TCS-SP8; Leica, Weztlar, Germany).
+ Open protocol
+ Expand
4

Quantitative Microscopy Analysis of Angiogenesis

Check if the same lab product or an alternative is used in the 5 most similar protocols
Bright-field and fluorescence images were captured using an inverted microscope (Nikon, TE2000-U) with a HQ2 CCD camera (SensiCamQE, Cook Cork.). All fluorescence images of endothelial cells were taken with the same settings with a 1 second exposure time for comparison. Time-lapse microscopy of capillary-like network formation was performed using a confocal laser scanning microscope (Leica TCS SP8) with an interval of 10 minutes. The z-stacks of images was collapsed to maximal projection images using Leica TCS SP8 confocal software. Data collection and imaging analysis were performed using NIH ImageJ software. The cell tracking was performed in ImageJ with the MTrackJ plugin. Cells were tracked for at least 3 hours at 10 min per frame. Experiments were repeated at least 3 times, and over 100 cells were quantified for each group. Student’s t tests were used to compare two groups. For comparisons of multiple groups, one-way ANOVA with Tukey’s post hoc test was used. The Kolmogorov–Smirnov (KS) two-sample test was used to compare between different cell populations (Fig. 7).
+ Open protocol
+ Expand
5

Confocal Microscopy Imaging of Subcellular Localization

Check if the same lab product or an alternative is used in the 5 most similar protocols
Subcellular localization and BiFC images were captured at 2 days post agroinfiltration with a Leica TCS-SP8 confocal laser scanning microscope as described previously (Fang et al., 2019 (link)). CFP, GFP, YFP, and mCherry were visualized at excitations of 440 nm, 488 nm, 514 nm, and 543 nm, respectively. Videos were obtained from 50 frames (3 s/frame) using time series programs in the Leica TCS-SP8. ImageJ software was used to edit videos playing seven frames per second.
+ Open protocol
+ Expand
6

Subcellular Localization of Proteins in Plants

Check if the same lab product or an alternative is used in the 5 most similar protocols
CERBERUS-mCherry and the other organelle markers used for protein subcellular localization analysis in N. benthamiana leaves have been described previously [22 (link)]. The constructs were introduced into A. tumefaciens EHA105 by electroporation, and N. benthamiana leaves were infiltrated with the resulting strains either alone or together. All were infiltrated with p19, which inhibits gene silencing [65 (link)]. Images were taken two days later with laser scanning confocal microscopy (Leica TCS SP8). The level of colocalization was analyzed using ImageJ. All protein subcellular localization assays were repeated at least three times.
For transient expression in L. japonicus root protoplasts, constructs (pA7-GFP-RPG, pA7-GFP-RPG, and ASTRAY-mRFP) were transiently expressed or co-expressed in L. japonicus root protoplasts using a DNA-PEG-calcium transfection method [66 (link)]. Images were taken 16 h after transfection by laser scanning confocal microscopy (Leica TCS SP8). For GFP, the filter sets for excitation and emission were 488 nm and 498–550 nm, respectively; for mCherry, DsRed, and mRFP, they were 561 nm and 575–650 nm. The level of colocalization was analyzed using ImageJ. All protein subcellular localization assays were repeated at least three times.
+ Open protocol
+ Expand
7

Seedling Viability Analysis using Fluorescent Dyes

Check if the same lab product or an alternative is used in the 5 most similar protocols
Seven-day-old seedlings were soaked in 10 mL propidium iodide (PI) solution for 10 min and photographed with a laser scanning confocal microscopy (TCS SP8, Leica) using an excitation wavelength of 488 nm and an emission wavelength of 660 nm. Seven-day-old seedlings were soaked in 20 µM fluorescein diacetate (FDA) solution and treated at 37 °C for 10 min. Subsequently, the seedling were photographed with a laser scanning confocal microscopy (TCS SP8, Leica) using an excitation wavelength of 480 nm and an emission wavelength of 530 nm.
+ Open protocol
+ Expand
8

Visualizing Nuclear and Organellar DNA

Check if the same lab product or an alternative is used in the 5 most similar protocols
To visualize nuclear and organellar DNA, uninucleate microspores (UNM) and mature pollen grains (MPG) were extracted from flower buds with sizes of approximately 10 mm (for UNM) or from flowers at anthesis (for MPG). DNA was stained with 4,6-diamidino-2-phenylindole (DAPI) staining solution (100 mM Na3PO4 (pH 7.0), 0.1% (v/v) Triton X-100, 1 mM Na2EDTA (pH 8.0) and 1 μg ml−1 DAPI) at room temperature for 30 min. Stained samples were imaged by confocal laser-scanning microscopy (TCS SP8; Leica) using a 405 nm laser diode for excitation and a 430–495 nm filter for detection of fluorescence emission. For the pollen squash method, stained pollen grains were placed on a glass slide and gently squashed by tapping on the cover slip41 (link). Squashed pollen were imaged by confocal microscopy (Leica TCS SP8), with z-stack imaging using the Galvo flow system and optimized settings with a step size of ~0.30 µm.
+ Open protocol
+ Expand
9

Visualizing Plastid Localization in Seedlings

Check if the same lab product or an alternative is used in the 5 most similar protocols
Green sectors potentially harbouring paternal plastids were identified in germinating seedlings by visual inspection and/or light microscopy using a stereomicroscope (Stemmi 2000-C; Zeiss). GFP fluorescence was detected with an MZ FLIII fluorescence stereomicroscope (Leica) using filters GFP2 (excitation filter: BP 480/40 nm, barrier filter: LP 510 nm) and GFP3 (excitation filter: BP 470/40 nm, barrier filter: BP 525/50 nm). Subcellular localization of GFP fluorescence was determined by UV microscopy with an Axioskop 2 (Zeiss; excitation filter: BP 450/90 nm, barrier filter: BP 515/65 nm), or by confocal laser-scanning microscopy (TCS SP8; Leica) using an argon laser for excitation (at 488 nm), a 500–510 nm filter for detection of GFP fluorescence and a 610–700 nm filter for detection of chlorophyll fluorescence. Subcellular localization of DsRed fluorescence was determined by confocal laser-scanning microscopy (TCS SP8; Leica) using a diode-pumped solid-state laser for excitation (at 561 nm), and a 575–605 nm filter for detection of DsRed fluorescence.
+ Open protocol
+ Expand
10

Immunofluorescence Staining for Akt Phosphorylation

Check if the same lab product or an alternative is used in the 5 most similar protocols
The immunofluorescence staining was carried out as described previously with the indicated antibodies [40 (link)]. The confocal dish was coated with 0.2% gelatin before cell culture. After DFX117 treatment for 8 h, cells were washed with PBS and fixed with 4% paraformaldehyde for 20 min. Then, cells were blocked with 1% BSA for 2 h at room temperature and rinsed three times with washing buffer. Cells were incubated with p-Akt (Ser473) at 4 °C overnight before the second antibody incubation for 1 h at room temperature in dark. Finally, the DAPI staining was performed before visualization under confocal microscopy (Leica TCS SP8, Wetzlar, Germany). The images were recorded by a Leica TCS SP8 confocal microscope using a 40× Silicone Oil Objective (40×/1.30 NA).
+ Open protocol
+ Expand

About PubCompare

Our mission is to provide scientists with the largest repository of trustworthy protocols and intelligent analytical tools, thereby offering them extensive information to design robust protocols aimed at minimizing the risk of failures.

We believe that the most crucial aspect is to grant scientists access to a wide range of reliable sources and new useful tools that surpass human capabilities.

However, we trust in allowing scientists to determine how to construct their own protocols based on this information, as they are the experts in their field.

Ready to get started?

Sign up for free.
Registration takes 20 seconds.
Available from any computer
No download required

Sign up now

Revolutionizing how scientists
search and build protocols!