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22 protocols using delta t dishes

1

Live-cell Imaging of Glioblastoma Cell Motility

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Cells were plated on laminin-coated Bioptechs delta-T dishes. For the duration of video acquisition, cells were maintained in a sealed chamber at 37 °C and 5% CO2. Phase-contrast images were taken at 10-min intervals for 90 min total. Images were acquired with the 10× objective of a Zeiss Axiovert 200M microscope equipped with an AxioCam HRm CCD camera (Zeiss). Motility was quantitated using the MtrackJ plugin (42 (link)) in ImageJ software (National Institutes of Health) as described previously (15 (link)). For live cell imaging and video microscopy of actin, lentiviral particles expressing eGFP-tagged Lifeact (23 (link)) were made and used to transduce glioblastoma cells. pLenti Lifeact-EGFP BlastR was a gift from Ghassan Mouneimne (Addgene plasmid # 84383).
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2

Bovine Ampullae Inflammation Analysis

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Qualitative and quantitative analyses in bovine ampullae showing mild, moderate or severe inflammation (n = 45) as well as in healthy controls (n = 10) were performed by digital live cell imaging. 1 cm part of the ampulla of each sample was cut and opened longitudinally. Specimens were pinned onto a Delta T dishes (Bioptechs Inc., PA, USA) coated with Sylgard® (Dow Corning, MI, USA). All samples were maintained at 37.5 °C using a stage heater (Delta T Controller, Bioptech Inc., USA) and an objective lens heater (Delta T Controller, Bioptech Inc., USA) attached to the microscope. Reference temperature was monitored prior to all recordings. For sperm-oviduct interaction and average survival time, 600,000 sperm (30 μl) were coincubated with the ampulla for 10 mins at 37 °C and submerged with sperm Talp before analysis. Imaging was performed with a fixed stage microscope, upright Olympus microscope (BX51WI) with water immersion dipping objectives equipped with the bright-field long-distance immersion objectives UMPLFLN 10xW, UMPLFLN 20xW and UMPLFLN 40xW (Olympus, Hamburg, Germany). Images and videos were documented with a SUMIX Mx7 camera (Summix, CA, USA).
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3

Microinjection-based Titration and Activity Assay for miRNA

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Cells grown on DeltaT dishes (Bioptechs, # 0420042105C) were microinjected as described (Pitchiaya et al., 2012 (link); Pitchiaya et al., 2013 (link), Pitchiaya et al., 2017 (link)). Briefly, injection solutions contained the appropriate miRNA at 1 μM concentration, 1x PBS and 0.5 mg/mL of 10 kDa cascade blue conjugated dextran (CB-Dex, Thermo-Fisher, # D1976). For microinjection based titration assays solution with 0 – 0.1 μM, 1x PBS and 0.1 mg/mL of 500 kDa cascade blue conjugated dextran (FITC-Dex, Thermo-Fisher, # D7136). For microinjection based miRNA activity assay, mRNAs were added at a stoichiometric amount based on the number of miRNA binding sites, for instance, 0.16 μM of RL-cx6x mRNA, bearing 6 cxcr4 binding sites, was added along with 1 μM cxcr4 miRNA. Solutions were filtered through a 0.45 μm Ultrafree-MC filter (Millipore, # UFC30HV00) and then centrifuged at 16,000 × g for 15min at 4 °C immediately before injection. The solution was loaded into a femtotip (Eppendorf, # E5242952008). Injections were performed using a Femtojet pump (Eppendorf) and an Injectman (Eppendorf) mounted to the microscope. Microinjections were performed at 100 hPa injection pressure for 0.5 s with 20 hPa compensation pressure. This pressure translates to a volume of 0.02 pL and 10,000–20,000 miRNA molecules.
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4

Measuring Cell Migration Velocity

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A total of 1.5 × 105 INCs were plated on to poly-l-Lysine coated (10 µg/mL in H2O) Delta T dishes (Bioptechs). Cells were grown one day to become a monolayer. The following day, the media was changed to Cell Imaging Solution (20 mM Hepes, pH 7.4, 2.5 mM KCl, 140 mM NaCl, 5 mM glucose, 1.4 mM CaCl2, 0.5 mM MgCl2) with 10% FBS following the scratch to image without the need for 5% CO2 and incubated at 37°C for 20 min. The Delta T dish was then mounted into the stage holder and a scratch was made on the dish with a p20 pipette tip. The Delta T dishes were kept at 37°C in the Biotechs DeltaT stage holder using a heated cover. Time lapse images of multiple locations were taken every 5 min for 6 h at 60× magnification as cells moved into the wound. Cell velocity was calculated using the ImageJ cell tracking software MTrackJ to track the distance individual cells traveled over the 6-h time window (Meijering et al. 2012 (link)). Cell velocities were plotted using box and whisker plots. For all box and whisker plots, the thick black line indicates the median, the box indicates the interquartile range, and the whiskers indicate the range.
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5

Imaging of dNK-Trophoblast Interactions

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JEG-3 were cultured in Delta T dishes (Bioptechs) coated with fibronectin (20 μg/ml), which were adapted to an Olympus FV1000 4-channel Confocal Imaging system. dNK were pre-labeled with Vybrant DiO at 1:1000 for 30 min in serum-free RPMI and then washed 3 times. After temperature calibration (37°C), the JEG-3 Delta dish was placed in the stage, and dNK were added at T=0. Cells were imaged with the 60x objective with transmitted light and 488 nm laser with emission filter of 500–545 nm, and images were taken every minute for up to 20 minutes. Images were processed using FV10-ASW software version 03.00.01.15.
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6

COS-7 Cell Culture and Transfection

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Cell culture was performed as reported previously23 (link) and reiterated here. COS-7 cells were obtained from ATCC (Manassas, VA, USA, catalog number CRL-1651) and maintained in standard DMEM-HG medium supplemented with 10% (vol/vol) heat-inactivated FBS, 1 mM sodium pyruvate and 2 mM Glutamax in a 5% CO2 incubator at 37 °C. For imaging, the cells were plated in Bioptechs Delta-T dishes (Bioptechs, Butler, PA, USA, product number 04200417B) and grown to ~ 70% confluency. Transient transfections were done with various plasmids according to manufacturer’s instructions using 1–2 μg DNA and 3ul of X-tremeGene HP DNA transfection reagent (Roche, Manheim, Germany, product number 06366236001). The transfected cells were incubated at 37 °C and 5% CO2 incubator for 24–48 h before imaging. The cell culture reagents DMEM-HG medium (catalog number 11960), fetal bovine serum (FBS, catalog number 10082), sodium pyruvate (catalog number 11360) and Glutamax (catalog number 35050) were obtained from Invitrogen (Life Technologies, Grand Island, NY, USA). Calyculin A was obtained from Sigma (catalog number C 5552).
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7

Live Cell Protein Microinjection Imaging

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NIH-3T3 cells (1 × 105) were seeded onto delta-T dishes (Bioptechs) and transfected with the vector expressing BFP-LacI one day before microinjection. The regular DMEM was replaced with phenol red-free medium 4 h prior to microinjection. Immediately before microinjection, the cell culture medium was replaced with a minimal HEPES buffered saline (HBS) medium without serum and vitamins, but containing 20 mM HEPES–KOH (pH 7.4), 135 mM NaCl, 5 mM KCl, 1 mM MgCl2, 1.8 mM CaCl2 and 5.6 mM glucose. The micropipette (Femtotip, Eppendorf) was loaded with ∼0.5 amol fluorophore-labeled proteins. Twenty fg of I-SceI and Trex2 were also added to the microinjection system. Live cells with a BFP dot were selected for imaging. We used HILO illumination to image cells at 120× magnification with 30 ms camera exposure on two Andor iXon Ultra EMCCD cameras using a cell-TIRF system on an Olympus IX81 microscope.
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8

Live-cell Motility Quantification Protocol

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Cells were directly plated on laminin coated Bioptechs delta-T dishes (Butler, PA, USA) in 1mL media. During image acquisition cells were maintained in sealed chambers at 37°C. Phase-contrast images were taken at 10 minute intervals for 1-1.3 hours using a 10x objective. Images were acquired using a ZiessAxiovert 200 M microscope equipped with a AxioCamHRm CCD camera (Zeiss, Göttingen, Germany). Motility was quantified using the MtrackJ plugin [49 (link)] in ImageJ software (National Institutes of Health, Bethesda, Maryland, USA) and scored as the average distance to point per cell per frame.
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9

Microinjection of Sea Urchin Eggs

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Adult Strongylocentrotus purpuratus were collected in La Jolla, CA, and held at 11°C (± 1°C) in flow-through seawater aquaria. Spawning and gamete gathering was performed as described previously (Campanale and Hamdoun, 2012 (link)). For microinjection, eggs were held on protamine sulfate coated delta-T dishes (Bio-ptechs, Butler, PA), and mRNA was injected at 2–5% of egg volume (Lepage and Gache, 2004 (link)). Injected embryos were cultured in filtered seawater (FSW) containing 100 µg/ml ampicillin (Sigma, St Louis, MO) at 15°C (± 0.5°C) for 24 hr, then plucked and cultured to gastrula stage in FSW lacking ampicillin.
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10

Microinjection of Cells on DeltaT Dishes

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Cells grown on DeltaT dishes (Bioptechs) were microinjected as described (Pitchiaya et al., 2012 (link); Pitchiaya et al., 2013 (link)).
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