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3 protocols using af700cd45

1

Isolation and Identification of Circulating Tumor Cells in Metastatic HCC Mouse Model

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CTC isolation was conducted in the mouse model of orthotopic metastatic HCC. Whole blood was withdrawn by heart puncture at euthanasia and immediately transferred into a 1.5‐mL EDTA disposable tube. The blood was immediately processed for CTC enrichment by Ficoll gradient, adapting the manufacturer’s protocol for the amount of blood collected. The blood was diluted in 2 mL of PBS and carefully layered on 3 mL of Ficoll Paque reagent (GE Healthcare). After centrifugation (400g at room temperature according to the manufacturer’s instructions), the PBMC layer was collected. If evident red cell contamination was detected at macroscopic examination, a red cell lysis step was added by using a commercial red cell lysis buffer (e‐Bioscience). After two washing steps with 2.5% fetal bovine serum–PBS, the cells were immediately stained with a fluorescent anti‐mouse monoclonal cluster of differentiation (CD)45 antibody (AF700CD45; BioLegend), according to the manufacturer’s instructions, and then analyzed by flow cytometry using DIVA software. We identified miRNA‐517 cells by flow cytometry as GFP‐positive cells.
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2

Peptide Library Synthesis and Liposome Formulation

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Trp2, AH1 and WT1 peptide libraries and peptides were synthesized by GenScript. CoPoP was synthesized as previously reported (32 (link)). The following lipids were used to produce liposomes: dioleoylphosphatidylcholine (DOPC; Corden #LP-R4–070), cholesterol (PhytoChol; Wilshire), and synthetic PHAD-3D6A (Avanti; #699855). QS-21 was purchased from Desert King (part number NC0949192). The APC-CD8a (Clone: CT-CD8a) antibody was obtained from Accurate Chemical and Scientific Corporation (#ACL168APC). The following antibodies were obtained from BioLegend: APC-CD8a (Clone: CT-CD8a; #100712), FITC-CD4 (Clone: GK1.5; #100405), AF700-CD45 (Clone: 30-F11; #103127), APC-Cy7-CD44 (Clone: IM7; #103027), PE/Cy7-CD62L (Clone: MEL-14; #104417), PerCP-Cy5.5-PD-1 (Clone: RMP1–30; #109119), pacific blue-IFN-γ (Clone: XMG1.2; #505818), BV605-TNF-α (Clone: MP6-XT22; #506329), PE/Cy7-Granzyme B (Clone: QA16A02; #372213). Anti-mouse PD-1 (#BP0146) and anti-mouse CTLA-4 (#BP0131) were acquired from Bio X Cell. Other reagents used were Golgiplug/Brefeldin A (BD; #555029), Live/Dead dye (Invitrogen; #L34857), Fc-block (Clone: 2.4G2; BD #553142), fixation/permeabilization kit (BD #554714), red blood cell (RBC) lysis buffer (BioVision #5830), Collagenase Type I (Gibco #17018–029), and DNase I (Roche #04536282001).
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3

CD45+ Cell Isolation from Paw Tissue

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Following paw tissue digestion, as described above, live cells were obtained using EasySepTM Dead Cell Removal (Annexin V) kit (STEM CELL) according to manufacturer's instruction. Cells were incubated with AF700 CD45 (Biolegend) at a dilution of 1:100 in DPBS−/− with 0.02 % BSA for 30 minutes at 4°C. Non-specific staining was blocked with TruStain X. Cells were suspended in DPBS−/− with 0.02 % BSA and the BD FACS Aria II was used sort for CD45 positive cells, which were collected in DPBS containing 0.1 % BSA for single cell sequencing.
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