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3 protocols using integrin α2

1

Antibody Panel for EMT Markers

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Antibodies against Vimentin, and αSMA were purchased from Sigma-Aldrich. N-cadherin, p44/42 MAPK, Phospho-p44/42 MAPK, EGFR antibodies were from Cell Signaling Technology (Danvers, MA); α-tubulin and ROBO1 from Abcam (Cambridge, MA). Fibronectin, Integrin αV, Integrin α2, Integrin α5, Integrin β1, Integrin β4 (BD Biosciences); MMP14 (Epitomics, Burlingam, CA); Ki67 Vector Laboratories (Burlingame, CA).
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2

Fractionation and Western Blot Analysis of Cell Lysates

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Cells were lysed in radioimmune precipitation assay (RIPA) buffer as described before [5 (link)]. Protein was subjected to either 8% Tris-glycine or 4–12% Bis/Tris (Invitrogen) SDS-PAGE. Quantitation of band intensity was performed with ImageJ software v1.47f (http://rsb.info.nih.gov/ij/). The following antibodies were used in this study: RAD9, integrin β1, integrin α2, integrin α5, PARP-1 monoclonal antibodies (BD Biosciences), β-actin, and α-tubulin monoclonal antibodies (Sigma).
To isolate the nuclear fraction, cells from three 100-mm culture dishes were fractionated using a NE-PER nuclear and cytoplasmic extraction kit (Thermo Scientific), following the manufacturer’s instructions. PARP-1 and α-tubulin were used as nuclear and cytosolic markers respectively.
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3

Antibody Characterization Protocol

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Antibodies used were FLAG (Sigma F3165), β-Actin (Santa-Cruz sc-47778), Integrin α2 (BD 611016) and Integrin β5 (Assay Biotech C0235).
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