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6 protocols using hnf1α

1

Detecting Cellular Signaling Pathways

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Antibodies against p38 (#8690), p-P38 (#4511), ERK1/2 (#4695), p-ERK1/2 (#4376), JNK (#9212), p-JNK (#9255), HNF1α (#89670), HNF4α (#3113) were obtained from Cell Signaling Technology (Cell Signaling Technology, Inc., Danvers, MA, USA). Antibodies against OTUD5 (ab254742), HBc (ab8638), HBx (ab2741), GAPDH (ab181602), Ubiquitin linkage-specific K48 (ab140601), Ubiquitin linkage-specific K63 (ab179434) were obtained from Abcam (Abcam, Cambridge, UK).
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2

Baicalin and Bile Acid Regulation

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Baicalin (>98%) was purchased from Dalian Meilun Biotechnology Co., Ltd (Meilunbio, Dalian, China). EE was purchased from Sigma-Aldrich Co. (St. Louis, MO, USA). Standards for BAs for cholic acid (CA), deoxycholic acid (DCA), chenodeoxycholic acid (CDCA), β-muricholic acid (β-MCA), taurocholic acid (TCA), taurodeoxycholic acid (TDCA), tauromuricholic acid (T-MCA), taurochenodeoxycholic acid (TCDCA), glycocholic acid (GCA), glycoursodesoxycholic acid (GUDCA), glycohyocholic acid (GHDCA), glycochenodeoxycholic acid (GCDCA), taurohyocholic acid (THDCA), glycodeoxycholic acid (GDCA), and interior label d4-glycochenodeoxycholic acid (d4-GCDCA) were obtained from Steraloids (Newport, RI, USA).
Antibodies directed against FXR, CAR, PXR, VDR, cholesterol 7a-hydroxylase (CYP7A1), and sterol 27-hydroxylase (CYP27A1) were purchased from Absin Biochemical Company (Shanghai, China). Antibodies directed against Sirt1, HNF-1α, tumor necrosis factor α (TNF-α), interleukin 1 beta (IL-1β), IL-6, and NF-κB were purchased from Cell Signaling Technology (Beverly, MA, USA). An antibody against BSEP was obtained from Santa Cruz Biotechnology (CA, USA). And an antibody against MRP2 was obtained from Abcam (Cambridge, UK).
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3

Western Blotting Protocol for Protein Analysis

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Western blotting was carried out according to a method depicted in the past [45 (link)]. The cells were lysed in the lysis buffer (2% SDS, 5% β-mercaptoethanol, 60 mM Tris-HCl, pH6.8, 0.01% bromphenol blue, and 10% glycerol). The signal was detected using Omni-ECL Femto Light Chemiluminescence Kit (EpiZyme, Shanghai, China). The primary antibodies used in the experiment include β-actin, HNF1α, HNF3α, HNF4α (Cell Signaling Technology, Danvers, MA, USA), and HBc (Synthesized by GenScript, Nanjing, Jiangsu, China).
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4

Western Blot Analysis of Lipid Regulators

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Whole-cell lysates were prepared using RIPA lysis buffer (50 mM Tris HCl, 150 mM NaCl, 1% Triton X-100, 1% sodium deoxycholate, 0.1% SDS, pH 7.4) containing complete EDTA-free protease inhibitor cocktail (Roche). Protein samples were separated by 10% SDS-polyacrylamide gel electrophoresis (PAGE) and transferred onto a 0.45-μm polyvinylidene fluoride (PVDF) membrane (Millipore, Bedford, MA, USA). The membranes were incubated with primary antibodies to LDLR (Abcam, Cambridge, UK), PCSK9 (R&D Systems, Minneapolis, MN, USA) HNF1α (Cell Signaling Technology, Danvers, MA, USA), FoxO1 (Cell Signaling Technology), FoxO3 (Cell Signaling Technology), HINFP (Novus, Littleton, CO, USA) or GAPDH (ZSJQ-Bio, Beijing, China), followed by horse radish peroxidase (HRP)-conjugated secondary antibodies (ZSJQ-Bio). An enhanced chemiluminescence detection system (Millipore) was used for blot detection. The quantification of detection protein amounts was determined by Image J software, normalized to GAPDH.
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5

Western Blot Protein Analysis

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Cultured cells were collected with cell lysis buffer (Beyotime, Shanghai, China). Protein samples were separated by precast NuPAGE Novex 4–12 % (w/v) Bis–Tris gels (Life technologies, Carlsbad, CA, USA) and then transferred onto nitrocellulose membrane using the iBlotTM dry blotting system as described by the manufacturer (Invitrogen, Carlsbad, CA, USA). Membranes were blocked in TBST buffer (20 mM Tris, pH 7.5, 150 mM NaCl, 0.1 % tween 20) containing 5 % milk for 1 h at room temperature and incubated with primary antibodies specific for LDLR (Biovision, Mountain View, CA), PCSK9 (Cayman Chemicals, MI), HNF1α (Cell Signaling) and GAPDH (Abcam) overnight at 4 °C, and then incubated with a secondary antibody conjugated with horseradish peroxidase (HRP) for 2 h at room temperature. Blots were developed using chemoluminescence (ECL, Thermo Fisher Scientific, Waltham, MA, USA) on FluorChem M image system.
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6

Protein Expression Analysis in HepG2 Cells

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To analyze the protein expression levels of LDLR, PCSK9, SREBP2, and HNF-1α, HepG2 cells were seeded and treated as described above, and the cells were washed with cold DPBS, harvested, and centrifuged (1200 rpm, 3 min). The collected pellet was lysed with the RIPA buffer (Elpis Biotech, Inc.) containing protease and phosphatase inhibitors (Roche, Basel, Switzerland). The lysates containing equal amounts of protein, were then loaded on Bis-Tris gels for electrophoresis (10%), before being transferred to nitrocellulose membranes. The blots were blocked in 5% skim milk solution for 1 h and probed with specific antibodies (PCSK9 (MBL Life Science, Woburn, MA, USA), LDLR (Biovision Inc., Milpitas, CA, USA), HNF-1α (Cell Signaling Technology, Inc., Danvers, MA, USA), SREBP2 (Cayman Chemical, Ann Arbor, MI, USA), and β-actin (Bethyl Laboratories Inc., Montgomery, TX, USA)]. After washing three times with tris-buffered saline (TBS) with Tween 20, the blots were incubated with peroxidase-conjugated purified goat anti-rabbit IgG (Enzo Life Sciences, Inc., Farmingdale, NY, USA) for 1 h. After an additional wash with TBS with Tween 20, the proteins were detected using chemiluminescence reagent (Pierce Biotechnology, Rockford, IL, USA). The chemiluminescent signal was analyzed using the Quantity One software (Bio-Rad Laboratories, Hercules, CA, USA).
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