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Gw4064

Manufactured by Bio-Techne
Sourced in United Kingdom, United States

GW4064 is a synthetic agonist of the nuclear receptor farnesoid X receptor (FXR). It serves as a molecular tool for studying the biological functions and signaling pathways associated with FXR activation.

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24 protocols using gw4064

1

Identification of MRSA Inhibitors by C. elegans Screening

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The five compounds: (4,4′,4″-(4-propyl-[1H]-pyrazole-1,3,5-triyl)trisphenol, PPT; (1S,2S)-2-[2-[[3-(1H-benzimidazol-2-yl)propyl]methylamino]ethyl]-6-fluoro-1,2,3,4-tetrahydro-1-(1-methylethyl)-2- naphthalenyl cyclopropanecarboxylate dihydrochloride, NNC; 4,5,6,7-tetrabromobenzotriazole, TBB; 3-[2-[2-chloro-4-[3-(2,6-dichlorophenyl)-5-(1-methylethyl)-4-isoxazolyl]methoxy]phenyl] ethenyl] benzoic acid, GW4064; and N-(cyclopropylmethoxy)-3,4,5-trifluoro-2-[(4-iodo-2-methylphenyl)amino] benzamide, PD198306) were purchased from Tocris Bioscience at the following levels of purity: PPT: >99.7%, NNC: >98%, TBB: >99%, GW4064: >97%, and PD198306: 98.8%. These compounds are members of a set of 185 hits identified previously in a C. elegans–MRSA-MW2 screen of 82,000 synthetic, low molecular weight compounds that block the ability of MRSA to kill nematodes [5 (link),9 (link)]. Hits were identified based on Z-scores. Z-scores are calculated from the ratio of alive versus dead worms after treatment with test compounds and represents the number of standard deviations (SD) the test compound differs from the mean using the formula Z = (xμ)/σ; where x is the raw sample score, μ is the mean of the population and σ is the standard deviation of the population. Samples with Z > 2σ are considered hits [5 (link)].
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2

Characterization of Hepatic Cell Lines

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Human hepatoma HepG2 cells were obtained from American Type Culture Collection (Manassas, VA, USA). Human primary hepatocytes (HPH) were obtained from Invitrogen; Thermo Fisher Scientific, Inc. (Waltham, MA, USA). 6E-CDCA was purchased from Abcam (Cambridge, MA, USA). GW4064 and GW3965 were purchased from Tocris Bioscience (Bristol, UK). OCA was provided by Intercept Pharmaceuticals, Inc. (New York, NY, USA). The expression plasmid for human FXRα was provided by Dr Timothy F. Osborne from Sanford Burnham Prebys Medical Discovery Institute (La Jolla, CA, USA). Expression plasmids for human RXRα and LXRα were obtained from GenScript Corporation (Piscataway, NJ, USA).
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3

Investigating FXR Agonist-Mediated Responses

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CDCA and CA were purchased from Sigma-Aldrich. FXR agonist GW4064 was obtained from Tocris Biosciences. Cell culture reagents Dulbecco’s modified Eagle’s medium (DMEM), fetal bovine serum (FBS), TaqMan master-mix and probes were purchased from Life Technologies. RNA Bee for RNA isolation, dimethyl sulfoxide (DMSO), and propanediol were obtained from Fisher Scientific. Primary and secondary antibodies for Western blotting were purchased from Santa Cruz Biotechnologies. All Western blotting gels, buffers, and markers were purchased through BioRad Laboratories. Complementary DNA synthesis kit was purchased through Promega. Protease inhibitor, Halt, and bovine serum albumin quantification reagents were purchased from Thermo Scientific.
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4

Deuterium Oxide-based Compound Screening

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Deuterium oxide (D2O, 99.9% deuterium) was from Sigma-Aldrich Chemical Co. (St. Louis, MO). GG was purchased from ChromaDex Corporate (Irvine, CA). GW4064 and CDCA were obtained from Tocris (Ellisville, MO). All ligands were prepared as 10 mM stock solution in dimethylsulfoxide (DMSO). All other materials were obtained from standard commercial sources.
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5

Ischemia-Reperfusion Injury in Mouse Liver

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After a midline laparotomy, mice were injected with heparin (100 μg/kg), and an atraumatic clip was used to interrupt arterial/portal venous blood supply to the cephalad liver lobes. After 60 to 90 minutes of ischemia, the clip was removed to initiate liver reperfusion. Sham controls underwent the same procedure but without vascular occlusion. Mice were killed after 6 hours or 5 days of reperfusion, and liver and serum samples were collected. To test the effect on acute liver IRI, GW4064 (5 mg/kg, intraperitoneally; Tocris Bioscience) or OCA (30 mg/kg, oral gavage; Sigma‐Aldrich, St Louis, MO) was administered 1 to 2 hours before the onset of liver ischemia. To test the effect on liver recovery from IRI, GW4064 (5 mg/kg) was administered intraperitoneally at 24 hours, day 2, day 3, and day 4 after reperfusion. Levels of serum alanine aminotransferase (sALT) were measured with an autoanalyzer by IDEXX Laboratories (Westbrook, Maine). A portion of the liver specimens was fixed in 10% buffered formalin and embedded in paraffin. Liver sections (4 μm) were stained with hematoxylin and eosin (HE). The severity of liver IRI was graded blindly using Suzuki's criteria20 on a scale from 0 to 4. Liver sections were processed for immunohistochemical staining of myeloperoxidase (Novus Biologicals) to quantitate polymorphonuclear leukocyte infiltration as described.21, 22
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6

Intestinal Organoid Culture Reagents

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Fetal bovine serum (FBS), DMEM, Minimum Essential Medium Eagle (MEM), CDCA, n-acetylcysteine (NAC), [Leu]15-Gastrin 1, NT peptide and β-actin antibody were from Sigma-Aldrich (St. Louis, MO). GW4064 was from Tocris (Minneapolis, MN). The phospho ERK1/2 and ERK1/2 antibodies were from Cell signaling (Danvers, MA). FXR and NTR1 antibodies were from Santa Cruz (Dallas, TX). Noggin-conditioned medium was purchased from U-Protein Express BV (Netherlands). Advanced DMEM/F12 medium, OptiMEM Reduced Serum Medium, growth factor–reduced Matrigel, B-27 Supplement, N-2 Supplement, HEPES, GlutaMAX and Zeocin were from ThermoFisher (Grand Island, NY). Mouse EGF was from PeproTech (Rocky Hill, NJ).
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7

FXR Ligand Treatment in Huh7 Cells

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Huh7 cells were maintained in DMEM supplemented with 10% FBS (Life technologies). For ligand treatment, media were replaced with phenol red-free DMEM supplemented 5% charcoal-stripped FBS (Life technologies) then FXR ligands (CDCA, Sigma, C-9377; GW4064, Tocris bioscience, #2473) were treated for 24 h. The siRNAs targeting human FXR (Dharmacon, L-003414-00-0005) were transfected with Lipofectamine 2000 (Life technologies) according to the manufacturer's protocol. After 24 h, media were replaced with phenol red-free DMEM containing 5% chacoal-stripped FBS then FXR ligands were treated for following 48 h.
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8

Oligodendrocyte Viability Assay with GW4064

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Primary OPCs were isolated using the immunopanning method as described earlier [22 (link), 23 ]. OPCs/differentiating oligodendrocytes were incubated with 1 or 10 μM GW4064 (Tocris, 2473) for 24/48 h. Cell viability upon treatment was measured according to manufacturer’s protocol using CellTiter-Glo® Luminescent Cell Viability Assay (Promega, G7570). When treated with bone marrow-derived macrophage (BMM) supernatant, oligodendrocytes were incubated with 50% supernatant in culture medium for 48 h.
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9

Gastric Cancer Cell Line Responses to FXR Modulators

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The normal GES-1 human gastric epithelial cell line, AGS, BGC-823 and MKN-45 human gastric adenocarcinoma cell lines, and SGC-7901 human gastric carcinoma cell line were obtained from the Academy of Military Medical Science (Beijing, China) and cultured in RPMI-1640 medium. All cells were maintained at 37°C in a humidified incubator containing 5% CO2. Chenodeoxycholic acid (CDCA; Sigma-Aldrich; Merck Millipore, Darmstadt, Germany; cat. no. c9377), GW4064 (FXR agonist; Tocris Bioscience, Bristol, UK; cat. no, 2473), and the FXR antagonist guggulsterone (Gug; Sigma-Aldrich; Merck Millipore; cat. no. 1302214) were dissolved in dimethyl sulfoxide. The cells (1–5×105) were seeded in six-well and 6 cm cell culture dish respectively. When the cells reached 80–90% confluence, they were serum-deprived overnight and then treated with CDCA (0, 50, 100 and 200 µM) in the presence or absence of Gug (5, 50 and 100 µM) or GW4064 (0.25, 0.5, 1, 5 and 10 µM) for 24 h under 37°C.
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10

Ferroptosis Pathway Regulation Assays

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Anti-FXR (sc-13063), anti-ACSL4 (sc-365230), anti-FTH1 (sc-376594), and anti-GAPDH (sc-32233) antibodies were purchased from Santa Cruz Biotechnology (Dallas, TX, USA), while anti-HMOX1 (43966), anti-caspase8 (4790), anti-caspase3 (9662), anti-cleaved caspase3 (9661), anti-actin (4970), and anti-3-nitro tyrosine (3-NT) (9691) antibodies were purchased from Cell Signaling (Danvers, MA, USA). Anti-MAFG (PA5-30086) and anti-4-hydroxynonenal (4HNE) (bs-6313R) antibodies were purchased from Invitrogen (Carlsbad, CA, USA) and Bioss (Woburn, MA, USA), respectively. Anti-AIFM2 (LS-C382008-50) antibody was purchased from LSBio (Seattle, WA, USA). GW4064 was obtained from Tocris Bioscience (Bristol, UK). Anti-GPX4 antibody (ab219592) was obtained from Abcam (Cambridge, UK). Erastin was purchased from MedChemExpress. Ferrostatin-1 and cisplatin were purchased from Sigma, Inc (St. Louis, MO, USA). The Image-iT lipid peroxidation kit (C11-BODIPY 581/591) was purchased from Thermo Fisher (Waltham, MA, USA). ON-TARGETplus human short-interfering RNAs against FXR (siFXR, L-003414) and AIFM2(siAIFM2, L-004443) were purchased from Dharmacon, Inc (Lafayette, CO, USA).
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