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7 protocols using cd11c fitc n418

1

Isolation of Inflammatory Leukocytes from CNS

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Inflammatory leukocytes infiltrating into the CNS were isolated using an established protocol (3,4). In short, CNS tissue was minced and leukocytes were isolated using a two‐step Percoll gradient (90% and 63%). The isolated cells were collected and then washed prior to staining. Cells were incubated in an anti‐CD16/32 Fc Block (BD Biosciences, San Jose, CA) at a dilution of 1:200. Cells were stained with fluorescently tagged rat anti‐mouse IgG for the following cell surface antibodies, Ly6G FITC (1A8), CD11b PE (M1/70), CD45 BV510 (30‐F11), CD8 PE‐Cy7 (53–6.7), (BD Biosciences), Ly6C APC (HK1.4), CD4 BV785 (RM4‐5), F4/80 FITC (BM8), I‐A/I‐E APC (M5/114.15.2), CD11c FITC (N418) (Biolegend, San Diego, CA), and CD4 FITC (RM4‐5) or Armenian hamster anti‐mouse IgG for CD80 PerCP‐Cy5.5 (16‐10A1) (BD Biosciences). A full description of gating strategies for flow cytometric staining and intracellular cytokine staining is provided in the Supporting Information Figs. S1–S4.
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2

Differentiation and Stimulation of BMDCs

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Bone marrow was isolated from C57BL/6 mice, and the isolated cells were differentiated into DCs according to a previously described protocol, with slight modifications [18 (link)]. These cells were seeded in a 24-well plate in RPMI 1640 (Welgene) with a 5% granulocyte-macrophage colony-stimulating factor (GM-CSF) medium. The medium was replaced every 2 days, and bone marrow-derived dendritic cells (BMDCs) were harvested at day 6.
BMDCs (2 × 105 cells/well) were seeded in a 96-well plate and stimulated with 1, 10, or 100 ng/mL of rIL-33 at 12 h prior to infection with the PR8 virus (1, 10, or 50 multiplicity of infections [MOIs]). At 24 h post-stimulation or 48 h post-infection, the cells and the culture medium were harvested. The production of IL-12p40 in the culture medium was measured by ELISA (BD Bioscience), according to the manufacturer’s protocol. The expression of surface markers, such as CD11c-FITC (N418, Biolegend), CD86-PE (GL1, BD Bioscience), and MHCII-PerCP-cy5.5 (M5/114.15.2, BD Bioscience), in harvested BMDCs were analyzed by flow cytometry.
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3

Isolation and Characterization of Immune Cells

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Spleens were minced through a 70 μm sieve and leukocytes were obtained after lysing red blood cells with ACK buffer. Livers were minced through a 100 μm cell strainer and digested for 30 min at 37 °C with rotation in HBSS (Ca2+, Mg2+) buffer containing 1 mg/ml (335 U/mg) collagenase IV (Sangon Biotech, Shanghai, China) and 200 μg/ml (100 Kunitz U/ml) DNase I (Sangon Biotech, Shanghai, China). Liver leukocytes were separated by percoll gradient centrifugation (GE Healthcare, Freiburg, Germany). The cells were then resuspended in RPMI-1640 at 1 × 106/ml, and surface staining was performed as previously described [16 (link)].
F4/80 and CD11b were used to stain macrophages, CD11c and CD11b for DCs, and Ly6G and CD11b for granulocytes. CD11c-FITC (N418; Biolegend), Gr1-PE (RB6-8C5; Biolegend), CD11b-PerCP-Cy5.5 (M1/70; eBioscience), F4/80-APC (BM8; Biolegend), and CD3-Pacific Blue (145-2C11; eBioscience) antibodies were utilized. As for intracellular iNOS-PE (W16030C; Biolegend) staining, the fixation and permeabilization steps were followed by Intracellular Fixation & Permeabilization Kit (eBioscience). Flow cytometric acquisition was performed with a BD FACSVerse flow cytometer, and data were analyzed using FlowJo software (TreeStar, Ashland, OR, USA).
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4

Immune Cell Profiling in Cellular Signaling

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Escherichia coli O55:B5 LPS and oleic acid were purchased from Sigma-Aldrich. Everolimus and NVP-BEZ235 were provided by Novartis. Phospho-S6 (Ser240/244) and phospho-Akt (Ser473) were purchased from Cell Signaling Technology. TER-119-APC, CD4-APC (RM4-5), CD8a-PerCP (53-6.7), CD19-FITC (6D5), I-Ab-PE (AF6-120.1), CD11c-FITC (N418), and F4/80-APC (BM8) antibodies for flow cytometry were purchased from BioLegend.
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5

Murine Immune Response Analysis

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Lymph nodes and spleen tissues were collected after mice were euthanatized on day 30. Single cells were obtained by grinding tissues with 70 μm nylon filters in 0.5% BSA-PBS. Anti-mouse antibodies against CD3-Percp/Cy5.5 (145-2C11, BioLegend), CD4-APC (GK1.5, BioLegend), CD4-FITC (GK1.5, BioLegend), CD8-PE (53-6.7, BioLegend), CD11c-FITC (N418, BioLegend), CD11b-Percp/Cy5.5 (M1/70, BioLegend), CD80-PE (16-10A1, eBioscience), CD86-APC (24F, BioLegend), CD69-FITC (H1.2F3, BioLegend), B220-Percp/Cy5.5 (RA3-6B2, BioLegend), CD138-APC (281-2, BioLegend) or I-A/I-E (MHC II)-PE/Cy7 (M5/114.15.2, BioLegend) were used for cell surface antigen staining. After washing with PBS for three times, cells were treated with Foxp3/transcription factor fixation/permeabilization concentrate and diluent (eBioscience, USA) and incubated with anti-mouse antibodies against IFNγ-PE/Cy7 (XMG1.2, BioLegend) or Ki67-FITC (SolA15, BioLegend) for intracellular antigen staining. Besides, S1 protein with His tag (Sino Biological, China) and anti-His tag-PE (BioLegend) were used to label S1 specific B cells. The cells were analyzed by flow cytometry.
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6

Isolation of Inflammatory Leukocytes from CNS

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Inflammatory leukocytes infiltrating into the CNS were isolated using an
established protocol (3,4). In short, CNS tissue was minced and leukocytes were
isolated using a two-step Percoll gradient (90% and 63%). The
isolated cells were collected and then washed prior to staining. Cells were
incubated in an anti-CD16/32 Fc Block (BD Biosciences, San Jose, CA) at a
dilution of 1:200. Cells were stained with fluorescently tagged rat anti-mouse
IgG for the following cell surface antibodies, Ly6G FITC (1A8), CD11b PE
(M1/70), CD45 BV510 (30-F11), CD8 PE-Cy7 (53-6.7), (BD Biosciences), Ly6C APC
(HK1.4), CD4 BV785 (RM4-5), F4/80 FITC (BM8), I-A/I-E APC (M5/114.15.2), CD11c
FITC (N418) (Biolegend, San Diego, CA), and CD4 FITC (RM4-5) or Armenian hamster
anti-mouse IgG for CD80 PerCP-Cy5.5 (16-10A1) (BD Biosciences). A full
description of gating strategies for flow cytometric staining and intracellular
cytokine staining is provided in the Supplemental Figures
1–4
.
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7

Quantifying Bacterial Loads and Immune Cells

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Bacterial loads were determined in BALF and blood. Serial dilutions of samples were plated on blood agar and colony forming units (CFU) were counted. To test for cell recruitment, cells were enriched by spinning the BALF (400 g 10 min RT), incubated with blocking antibody (anti-CD16/32, Biolegend) and stained using CD11c-FITC (N418, Biolegend), SiglecF-PE (E50-2440, BD bioscience), Ly6C-PerCp (HK1.4, Biolegend), F4/80-APC (BM8, Biolegend), CD45-Alexa700 (30-F11, Biolegend), Ly6G-BV421 (1A8, Biolegend) and CD11b-BV510 (M1/70, Biolegend).
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