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53 protocols using sodium hypochlorite solution

1

Germination and Sterilization of Medicinal Plant Seeds

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Seeds of C. roseus (cultivar ‘Little Bright Eye’; obtained from NESeed, USA) were used in this study. The seeds were surface sterilized using 75% ethanol for 5 min and then 30% sodium hypochlorite solution (Sigma-Aldrich) for 10 min. After rinsing with sterile ddH2O for 5 times, the seeds were inoculated on half-strength Murashige and Skoog (½ MS) medium. The seeds were kept in the dark at 30 °C for two days and then transferred to an incubator at 26 °C. For VIGS experiments targeting the CrChlH (accession numbers HQ608936) and CrPDS (accession number JQ655739) in C. roseus, the germinated seeds were grown in the dark for another 3 days. However, for VIGS of TIA pathway genes, the germinated seeds were grown under a light regime of 16/8 photoperiod for 3 days.
For VIGS of ChlH genes in G. inflata, and A. annua, the seeds of respective species were germinated on half-strength MS medium, and seedlings were grown in the dark at 26 ℃. Seeds of G. inflata were treated with H2SO4 for 30 min [46 (link)], surface sterilized with 30% sodium hypochlorite solution (Sigma-Aldrich) for 10 min, and germinated on half-strength MS medium for 7 days in dark. Seeds of A. annua were surface sterilized as described for C. roseus seeds and germinated on half-strength MS medium for 6 days in dark.
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2

Plant Seed Surface Sterilization Protocol

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Plant seeds were surface sterilized according to the protocol published by Rothballer et al. (2003 ) with slight modifications. The seeds were washed in 1% Tween80 (2 min) and subsequent in 70% ethanol (2 min) followed by three washing steps in sterile deionized water. After an incubation step in 13% sodium hypochlorite solution (Sigma-Aldrich® Co., St. Louis, USA) (20 min) seeds were again washed three times in sterile deionized water, incubated in sterile deionized water for 4 h followed by a second incubation step in 13% sodium hypochlorite solution for 10 min. Five washing steps in sterile deionized water completed the surface sterilization. Seeds were then placed on NB (Nutrient Broth) agar plates and incubated for 3 days at room temperature in the dark to allow germination and to control the success of surface sterilization. Only germinated seedling showing no visible contamination were used for further experiments.
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3

Coral Microparticle Preparation and Sterilization

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Coral pieces were grinded by the use of mechanical mill and the obtained particles were classified into different sizes by the use of sequential sieves.
After being sorted, the coral microparticles were disinfected by immersing in sodium hypochlorite solution (Merck, Germany) for 30 h followed by washing with distilled water several times and vacuum drying. It is worth to mention that the disinfection process of the coral was carried out after they were grinded into micro sized particles, to enhance the exposure of their surface with disinfecting solution. After being disinfected, coral particles were sterilized by being exposure to gamma radiation (25 KG) for 2 h.
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4

AFB1 Analytical Procedure

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The AFB1 standard (CAS number: 1162-65-8), dimethyl sulfoxide (≥99.9% purity, CAS number 67-68-5), HPLC grade methanol (CAS number 67-56-1), 96% ethanol (CAS number 64-17-5), sodium hydroxide (NaOH; ≥97% purity; CAS number 1310-73-2), hydrochloric acid (HCl; ~37% purity; CAS number 7647-01-0), and sodium hypochlorite solution (CAS number 7681-52-9) were acquired from Merck KGaA (Darmstadt, Germany).
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5

Synthesis and Characterization of PCN-250-Fe3 MOF

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All chemical
reagents, such as potassium nitrate (KNO3), sodium sulfate
(Na2SO4), hydrochloric acid (HCl), sulfamic
acid (H3NSO3), p-aminobenzenesulfonamide
(H2NC6H4SO2NH2), N-(1-naphthyl)ethylenediamine dihydrochloride
(C10H7NHCH2CH2NH2·2HCl), phosphoric acid (H3PO4), sodium
hydroxide (NaOH), ammonium chloride (NH4Cl), citric acid
(HOC(COOH)(CH2COOH)2), salicylic acid (2-(HO)C6H4CO2H), sodium hypochlorite solution
(NaClO, 6–14%), sodium nitroferricyanide (Na2[Fe(CN)5NO]), and sodium nitrite (NaNO2), were used as
received from Merck and Sigma-Aldrich Co., Ltd., without further purification.
The PCN-250-Fe3 MOF also was procured from commercial sources,
called framergy. All solutions were prepared by using ultrapure water
(18.2 MΩ cm resistivity at 25 °C).
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6

Determination of Free Chlorine by TMB

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Disposable low-binding 96 microplates were purchased from Sarstedt (Germany). Absorption suprasil® quartz cuvettes of 10-mm pathlength and 1400-μL chamber volume were provided by Hellma GmbH & Co. KG (Germany). Sodium hypochlorite solution was purchased from Merck KGaA (Germany) (Lot number: K50436114, originally containing 120 g L−1 of active chlorine as calculated from iodometric titration) and used to prepare stock solutions based on the intrinsic UV absorbance of ClO [31 ]. DPD1 free chlorine test kit was purchased from Powehaus24® GmbH & Co. KG (Germany). TMB and other chemicals were purchased from Sigma Aldrich (Milan, Italy). A stock solution of about 1 mM TMB has been prepared in ethanol/H2O 1:1 v/v and left overnight at room temperature (RT) until completely dissolved before storing it at 4 °C in a dark bottle. All reagents were used as received without any further purification. MilliQ water with a resistivity of 18.2 MΩ cm at 25.0 °C was degassed and used in preparation of all the solutions (Merck Millipore, Italy).
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7

Peanut Shell-derived Adsorbent for Water Purification

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Peanut shells were purchased from a grocery store and used as the raw materials. Sodium hypochlorite solution (6–14%), copper nitrate trihydrate (Cu(NO3)2·3H2O), sulfuric acid (95–98 wt%), 1,3,5-benzene tricarboxylic acid (BTC), N,N'-methylene bisacrylamide (MBA), and other reagents (NaOH, HNO3, CHCl3, EtOH, t-butyl alcohol and Congo Red) were all purchased from Merck. Deionized water (resistivity 18.2 MΩ/cm) was used in all cases. All the chemicals in this study were used as received without any further purification.
FTIR measurements were conducted on Nicolet 6700 Fourier transform infrared spectrometer. Scanning electron microscopy (SEM) measurements were conducted on Hitachi S-4800 instruments operated at 2 kV for gold-sputtered samples. XRD patterns were recorded on a Bruker D8 ADVANCE X-ray diffractometer with a Cu Ka radiation (λ = 1.5418 Å). The powder was leveled on sample holders and scanned with a 2θ angle from 5° to 50° with a step speed of 5°/min. The concentration of the contaminated water was determined using a DU 800 UV–Vis spectrophotometer. The amounts of Mn2+ and Mn7+ were determined by Inductively Coupled Plasma (ICP) analysis on sequential plasma spectrometer, Shimadzu (ICPS-7000).
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8

Lipid Bilayer Characterization via Patch Clamp

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All measurements were done using a Patch Clamp amplifier (EPC 10 from Heka-Electronics). Two homemade Ag/AgCl electrodes were prepared by chlorination of ultra-clean Ag wires with diameter of 150 μm. The chlorination was achieved by immersing the two Ag wires in sodium hypochlorite solution (Merck, Germany) for about 30 min while applying a potential difference of a few volts. After chlorination; Ag wires turned into reference Ag/AgCl electrodes and we connected both of them to the probe of the patch amplifier. The two electrodes were inserted into the microfluidic chip via the two inlets of the aqueous phase, a few hundred microns away from the lipid bilayer. As excitation signal, we used a sinusoidal wave at a frequency of 10 kHz and an amplitude of up to 50 mV.
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9

Isolation and Preservation of Ophiocordyceps sinensis

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The 119 dried samples of O. sinensis natural fruiting bodies were collected from various regions in China, including Yunnan and Gansu (20 samples), Qinghai (20 samples), Sichuan (39 samples), and Tibet (40 samples). Each sample of O. sinensis fruiting body was carefully washed with sterile water and then soaked in a 1% sodium hypochlorite solution (Merck, Germany) for one min. Next, the sample was cut into small pieces, measuring 2 - 5 mm in length, and then inoculated onto SDA agar. The inoculated samples were then cultured aseptically at 16°C for 7 days. Finally, the obtained colonies were observed, and only white colonies were selected. Fungal colonies were subcultured and repeated several times until completely bacteria-free. Stock cultures of pure fungal strains were maintained at a temperature of -20°C, using 10% glycerol (v/v) as a preservative.
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10

Histochemical Analysis of Tissue Sections

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Sodium hypochlorite solution (concentration: available chloride 10–15%, 425044), acetic acid (concentration≥99.7%, 320099), Direct red 80 (Sirius red, powder, dye content 25%, 365548), ferric chloride (powder, F-7134), picric acid solution (1.3% in H2O, saturated, P6744) and hematoxylin (powder, H9627) were purchased from Sigma-Aldrich (MO, USA). Ethylenediaminetetraacetic acid (powder, 99%, A10713) was obtained from Alfa Aesar (MA, USA). Paraffin (melting point 56–57°C, 22900700) was acquired from Fisher Scientific (PA,USA). Ethyl alcohol (absolute, anhydrous, 111000200) was purchased from Pharmco (USA), and hydrochloric acid (concentration 36.5–38%) was obtained from VWR Chemicals BDH (USA).
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