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68 protocols using ti sapphire laser

1

TPEF Imaging of EETE Tissues

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TPEF images were acquired on a Leica TCS SP2 confocal microscope (Wetzlar, Germany) equipped with a Ti:sapphire laser (Spectra Physics, Mountain View, CA). Samples were placed on glass coverslips, excited with 755, 800 and 860 nm light and imaged using a 63×, 1.2 NA water immersion objective. The microscope was equipped with a microincubation system that kept samples in a humid chamber maintained at 37°C and 5% CO2 (Okolabs, Ottaviano, Italy). TPEF images were acquired using emitter bandpass filters centered at 460 and 525 nm. Image stacks from one to four regions from 43 independent EETE tissues (nC_HFK = 10, nHKc/DR = 4, n16E6_HFK = 10, n16E7_HFK = 6 and n16E6E7_HFK = 13) were acquired. TPEF 3D images were rendered in ImageJ (v10.2) and OsiriX (v3.0.2).
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2

Multiphoton Imaging of Microvascular Blood Flow

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An Olympus BX51WI upright microscope and a water-immersion LUMPlan FL/IR 20×/0.50 W objective were used. Excitation (740 nm) was provided by a Prairie View Ultima multiphoton laser scan unit powered by a Millennia Prime 10 W diode laser source pumping a Tsunami Ti: sapphire laser (Spectra-Physics, Mountain View, CA, USA). Blood plasma was labeled by i.v. injection of tetramethylrhodamine isothiocyanate dextran (155 kDa) in physiological saline (5 % wt/ vol). All microvessels in an imaging volume (500 × 500 × 300 μm) were scanned at each study point, measuring the diameter and blood flow velocity in each vessel (3–20 μm Ø). Tetramethylrhodamine fluorescence was band pass filtered at 560–600 nm and NADH autofluorescence at 425–475 nm. Imaging data processing and analysis were carried out using the NIH ImageJ processing package.
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3

Multi-Photon Microscopy for Vascular Imaging

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A Leica TCS SP5 II upright resonant scanning multi-photon microscope with a Leica 25X, 0.95NA water immersion objective was used throughout the entire experiment (Leica Microsystems, Germany). A Ti:sapphire laser (Spectra Physics, Irvine, California) was tuned to 720 nm for two-photon excitation in the UV range.
All in vivo vascular images were captured at 0.68 μm isotropic resolution with 8 line averages. For each image, 512 × 512 pixels were collected every 280 msec with non-descanned detectors and an 8 kHz resonant line scanning mirror. The vasculature dye ANEPPS channel consists of two dichroic mirrors with cutoff wavelengths at 510 nm and 560 nm (Semrock FF510-Di02 and FF560-Di01, respectively) and a 70 nm wide band-pass filter centered at 605 nm (Chroma Technology, ET605/70M). A short-pass filter with a cutoff wavelength at 680 nm is used to block the excitation light for all imaging experiments.
The 4.0 μm microsphere image stacks were captured at 0.4 × 0.4 × 0.4 μm and at 50 × 50 × 50 nm isotropic resolution with 2 line averages using two dichroic mirrors with cutoff wavelengths at 450 nm and 650 nm (cover full emission range of microspheres). The PSF images from the 0.2 μm microsphere were scanned at 52 × 52 × 142 nm resolution.
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Fluorescence Imaging of Murine Hearts

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Hearts collected from the mice were sectioned into 1-mm axial slices and imaged ex vivo in reflectance mode on the IVIS spectrum system (PerkinElmer), as well as on a high-resolution fluorescence lifetime imaging system, as previously described42 (link). The time domain fluorescence system utilizes a Ti:Sapphire laser (SpectraPhysics, MaiTai) and a gated intensified CCD camera (Picostar HRI, LaVision Gmbh). ADN fluorescence was acquired with 675 nm excitation and 720 nm emission filter settings. Annexin fluorescence was acquired with 745 nm excitation and 800 nm emission filters. Signal-to-noise ratio (SNR) and TBR were calculated using standard definitions, as previously described37 ,42 (link).
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5

Fluorescence Lifetime Characterization

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A fluorometer (Shimadzu RF--5300PC) was used for the measurement of fluorescence spectra. Fluorescence lifetimes were measured with a time--correlated single--photon--counting system using an experimental setup. 23 The excitation light source was the second harmonic (355 nm) of a Ti:Sapphire laser (Spectra Physics, Tsunami). Fluorescence time profiles were analyzed by non--linear least--squares fitting with deconvolution of the actual instrumental response function (IRF). The typical time resolution by this method is ca. 5-10 ps. SEM images were acquired on a JSM--7000F (JEOL) microscope using a voltage of 10 kV.
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6

Nonlinear Optical Imaging of Decellularized Scar

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Regions of the decellularized scar were sectioned into strips and imaged via nonlinear optical microscopy. Images were acquired on a Leica TCS SP2 confocal microscope equipped with a Ti:sapphire laser (Spectra Physics, Mountain View, CA, USA) tuned to 800 nm. By using a 63× objective (1.2 NA), image stacks (512 × 512 pixel, 238 × 238 μm2 field of view) were acquired at 5-μm increments from the surface of the tissue by using a set of non-descanned PMTs. Second harmonic generation (SHG) images were collected in the backward and forward direction by using 400 (±10)-nm bandpass filters. To measure collagen cross-link fluorescence, TPEF was simultaneously measured by using a 525 (±25)-nm filter. Image intensities were normalized for PMT gain and laser power, as previously described [38 (link)]. The average backward SHG, forward SHG, and TPEF intensities within the first 100 μm from the tissue surface were computed from each acquired image volume.
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7

Calcium Imaging of Cerebellar Purkinje Cells

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PCs in parasagittal cerebellar slices from C57BL/6 mice (P29) were filled for at least 15 min via a patch electrode with Alexa 594 (15 μM) and OGB-1 (200 μM) in CsCl-based internal solution (see above). Cell morphology and RP protocol-induced Ca2+ transients were imaged using a custom-built 2-photon microscope (Prairie Technologies) and a Ti-Sapphire laser (Spectra-Physics) tuned to 840 nm. Calcium imaging was carried out at ROIs both in line-scan (100 Hz) and frame-scan (0.5 Hz) modes using Scan Image.
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8

Collagen Imaging in 3D Models

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Second-harmonic generation imaging of collagen in 3D organotypic models was performed using a Leica SP8 upright confocal microscope with 25× NA 0.95 water objectives controlled by Leica LAS X software. The images were acquired with 880 nm illumination laser line from MaiTai Ti:Sapphire laser (Spectra Physics) and HyD-RLD detector installed 440/20 nm filter cube (Leica), also used 483/32 nm filter (Leica) collecting autofluorescence signals at the same time. Z-series optical sections were collected with a step size of 1 micron driven by SuperZ galvo stage (Leica). Collagen was quantified in ImageJ by measuring the mean signal intensity of z-stack sum projections in three equal sized areas across three fields of views for each collagen disc.
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9

Two-photon imaging of mRFP-HCAR1 cells

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In order to perform two-photon measurements in vivo, a cranial window was implanted over the barrel field of the somatosensory cortex in two of the mRFP-HCAR1-expressing mice, both of which showed the described cellular expression. During imaging, the mice were head-fixed and freely walking on a spherical treadmill50 (link). We imaged the mRFP-HCAR1-expressing cells in the pia mater using a two-photon laser scanning microscope (Prairie Ultima IV, Bruker Corporation, USA). The fluorophore was excited by a Ti:sapphire laser (InSight, Spectra-Physics, USA), which was set to emit laser pulses at a wavelength of 1,000 nm, and the laser pulses were focused on the sample through a water immersion objective (N16XLWD-PF, numerical aperture (NA) 0.8, Nikon, Japan). The fluorescent signal was then filtered through a bandpass filter with a 50 nm bandwidth ∼525 nm (ET525/50 m, Chroma, USA) and captured in a photomultiplier tube. Images were acquired in the PrairieView software (Bruker Corporation).
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10

Spatiotemporal Analysis of Embryos

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Embryos were dechorionated and mounted dorsally on #1.5 coverslips with 1% low-melt agarose in EM without methylene blue. Acquisition and analysis was performed as previously described (Stringari et al., 2011 (link)). Briefly, the embryos were imaged for 2.7 min (for spatial analysis) or in single frames (4 sec –for temporal analysis) on a Zeiss 710 confocal microscope with a Ti:Sapphire laser (Spectra-Physics, Newport Beach, CA) as a two photon excitation source and an ISS A320 FastFLIM box coupled to two H7422P-40 photo-multiplying tubes (Hamamatsu, Japan). Data acquisition and analysis were performed using SimFCS software (LFD, Irvine, CA). Images were acquired with a 40X 1.2 NA water immersion objective. The excitation frequency used was 760 nm and in order to enrich the signal for RA, the emission was filtered through a 495LP dichroic mirror. Solutions of Rhodamine in water and Fluorescein in 100 mM KOH (pH 9.0) were used as references.
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