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Ultracruz mounting medium

Manufactured by Santa Cruz Biotechnology
Sourced in United States, Germany, Japan

UltraCruz mounting medium is a versatile, water-based solution used to mount and preserve samples for microscopic analysis. It is designed to maintain the structural integrity and clarity of the specimen while providing a transparent and stable medium for imaging.

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66 protocols using ultracruz mounting medium

1

Immunohistochemical Analysis of UCP1 in BAT and WAT

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Samples of BAT and subcutaneous WAT were dissected, immediately fixed with ice-cold 4% (w/v) paraformaldehyde in PBS, and embedded in paraffin, and sections of 4 μm were obtained. The sections were deparaffinized at 60 °C for 20 min, immersed in xylene, rehydrated through graded ethanol solutions, and finally in distilled water. The sections were washed with 1X PBS and blocked with 10% rabbit serum (Santa Cruz Biotechnology) for 30 min at room temperature. The sections were subsequently incubated with rabbit anti-UCP1 1:100 (Abcam) at room temperature for 1 h. After washing with 1X PBS, the sections were incubated with goat anti-rabbit FITC-conjugated secondary antibody (1:500; Santa Cruz Biotechnology) at room temperature for 1 h. The sections were washed again with 1X PBS, mounted with UltraCruz™ mounting medium (Santa Cruz Biotechnology), and viewed on a Leica DM750 microscope (Leica, Wetzlar, Germany).
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2

Immunofluorescence Analysis of p53

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For immunofluorescence, fresh frozen sections were cut at 5-μm thickness using a cryostat. All tissues were fixed in fresh acetone followed by permeabilization in 0.2% Triton X-100/0.5% normal goat serum/PBS, then incubated with primary antibody against p53 (Cell signaling technology, #2527) and secondary antibodies labeled with FITC. After nuclear staining with the UltraCruz Mounting Medium (Santa Cruz, sc-24941), the tissues were visualized using Confocal Laser Scanning Microscope (Leica TCS SP8).
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3

Immunohistochemical Analysis of Cellular Stress Markers

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After de-paraffinization of sections, the slides were autoclaved in 0.1M sodium citrate pH 6 for antigen retrieval step (30 (link)). The slides were allowed to cool and washed with PBS twice times. Slides were incubated with 5% normal serum depending upon the source of secondary antibody used. The slides were incubated with primary antibodies at 4°C overnight (HSP70, 8-oxoguanine p-JNK, COX2, GFAP) from Santa Cruz Biotechnology at 1:100 dilution. Next morning, after washing with PBS, fluorescent labeled secondary antibodies (Santa Cruz Biotechnology) as 1:50 dilution were used for signal amplification in dark chamber, followed by mounted with UltraCruz mounting medium (Santa Cruz Biotechnology). The slides were pictured with confocal scanning microscopes (Flouview FV 1000, Olympus, Japan) and fluorescence intensity was quantitatively analyzed by ImageJ and expressed as the relative integrated density of the samples relative to the sham.
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4

Assessing Vascular Permeability in Cardiac Tissue

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To determine if overexpression of Trx-1 causes alterations in vascular permeability in cardiac tissue, 2% w/v Evans blue dye (E2129, Sigma, MO) was injected intraperitoneally 21 hours after CLP surgery, allowing the Evans blue dye to circulate for 3 hours prior to animal sacrifice. Twenty-four hours after CLP surgery the mice were sacrificed and the hearts were isolated. Hearts were embedded in paraffin, sectioned and treated with a graded concentration of histoclear and ethanol. After subsequent washes with PBS, tissue sections were covered with UltraCruz Mounting Medium (Santa Cruz Biotechnology), and microscopic evaluation was carried out using an Olympus DP73 camera and Olympus cellSens software (version 1.5; Olympus). The images were taken at 100x magnification, and background and subtraction settings were kept constant between images.
Evans blue dye is a metabolically inactive and non-toxic tracer that is commonly used to estimate plasma volume and vascular permeability in animal models (30 (link)). Evans blue dye rapidly binds to serum albumin and can be detected in organs when plasma extravasation occurs due to endothelial cell hyperpermeability, which often occurs in septic organs (31 (link)).
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5

Immunostaining of Viral Proteins in BHK-21 Cells

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A 104 aliquot of BHK-21 cells was grown on glass coverslips coated with 50 μg/ml poly(D) lysine (Sigma-Aldrich) in 35 mm tissue culture plates for immunostaining detection of viral protein localization in cells. Twenty-four hours after seeding, the cells were rinsed with PBS and infected with 1 ml of cell-free culture supernatant for 6 h. After the infected cells were incubated for the desired length of time, they were rinsed once with PBS and then fixed in 3% paraformaldehyde for 10 minutes at room temperature. After rinsing with PBS-GSA (10 mM glycine and 0.2% sodium azide), the cells were permeabilized with 0.5% Triton-X-100 for exactly 3 min. After blocking (3% bovine serum albumin in PBS-GSA), coverslips were successively incubated with rabbit polyclonal anti-PFV-IN (1:40) or rabbit polyclonal anti-PFV-Gag (1:150) for 1 h. Cells were then washed and incubated for 30 min with 1:80 (PFV-IN) or 1: 200 (PFV-Gag) dilutions of FITC-conjugated donkey anti-rabbit IgG (sc-2089, Santa Cruz Biotechnology Inc., USA) secondary antibody. Finally, the coverslips were mounted onto a microslide using a drop of UltraCruz mounting medium (sc-24941, Santa Cruz Biotechnology) with DAPI. Fluorescence microscopy observations were performed with a fluorescence microscope (Nikon, Eclipse, TE 2000-U, Japan) at a magnification of 400×.
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6

En Face Immunohistochemistry of Arteries

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Immunohistochemistry was performed on arteries in the en face preparation as previously described (11 (link)). Briefly, arteries were isolated, cleaned of connective tissue, and cut open longitudinally. Tissue was fixed with 4% formaldehyde, then permeabilized and blocked with a phosphate-buffered saline (PBS) solution containing 1% Triton X-100 and 2% bovine serum albumin (BSA). Arteries were incubated with primary antibody overnight at 4°C, then washed and incubated with a Texas red–conjugated secondary antibody for 2 hours at room temperature. Tissue was washed and mounted on a slide with UltraCruz Mounting Medium (Santa Cruz Biotechnology, sc-24941), which contains DAPI nuclear stain. Fluorescence images were obtained using a FluoView 1000 laser-scanning confocal microscope (Olympus).
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7

Immunofluorescence Microscopy Protocol

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48 h after transfection, cells were fixed with 4% paraformaldehyde and incubated with primary antibodies (1:250) overnight at 4 °C. After washing, cells were incubated with fluorescence-labeled secondary antibody (1:100). After washing, coverslips were placed on a glass slide using UltraCruz™ mounting medium (Santa Cruz) before fluorescence microscope examination.
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8

Immunofluorescence Assay for AhR and Nrf2

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Normal human epidermal keratinocytes (2 × 104) cultured on slides (Lab-Tek, Rochester, NY, USA) with or without Gly were washed in phosphate-buffered saline (PBS), fixed with acetone for 10 min and blocked using 10% bovine serum albumin in PBS for 30 min. Samples were incubated with primary rabbit anti-AhR or Nrf2 (1:50) in western breeze blocker diluent (Invitrogen, Carlsbad, CA, USA) overnight at 4°C. Slides were washed with PBS before incubation with antirabbit secondary antibody (Alexa Fluor 546 or 488; Molecular Probes, Eugene, OR, USA) for 1 h at room temperature. After nuclear staining with 4′,6-diamidino-2-phenylindole, slides were mounted with UltraCruz mounting medium (Santa Cruz Biotechnology). All samples were analyzed using a D-Eclipse confocal laser scanning microscope (Nikon, Tokyo, Japan).
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9

Quantification of DNA Damage by Immunofluorescence

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DNA damage was visualized and quantified by direct counting of fluorescent cells by immunofluorescent microscopy. In brief, cells were seeded at 1000 cells per well in 8-well chamber slides (Ibidi GmbH, Martinsried, Germany) and incubated overnight. Cells were centrifuged onto the coverslip, washed once with PBS and then fixed in 100% methanol at −20 °C for 10 min. The fixed cells were blocked in blocking buffer (1% BSA and 0.05% Tween-20 in PBS) for 1 h, followed by three washes with PBS. The cells were then incubated with Anti-DNA/RNA antibody [15A3] 1:400 at 4 °C overnight (Abcam, Cambridge, UK), FITC-conjugated secondary antibody 1:800 at room temperature for 1 h (Santa Cruz Biotechnology, CA, USA), washed three times with PBS, before mounting with UltraCruz Mounting Medium (Santa Cruz Biotechnology, CA, USA). The same assay was performed following exposure to oxidative stress by treating the cells with hydrogen peroxide (ICM Pharma, Singapore) at 200 µM for 16 h.
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10

Quantification of SSTR2 Expression

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SSTR2 levels in all three cell lines were determined by flow cytometry and immunofluorescence. 105 cells/well were seeded in either 8-well chamber slides (Lab-Tek, immunofluorescence) or 24-well plates (Corning, flow cytometry). The medium was removed and the cells were washed twice with phosphate buffered saline (PBS, 500 µL). Then bovine serum albumin (2% BSA, 500 µL) was added and the cells were incubated for 1 h at 4 °C, followed by addition of anti-SSTR2 monoclonal antibody or isotype control (R&D Systems, 1:100 dilution). The cells, with the antibody, were incubated for an additional 1 h at room temperature followed by three PBS washes. Subsequently, goat anti-mouse antibody (R&D Systems, 500 µL, 1:100 in 2% BSA) was added and the cells were incubated for additional 1 h at room temperature, followed by three PBS washes. Cells were mounted with UltraCruz mounting medium containing DAPI (Santa Cruz Biotechnology, TX) and fluorescence images were determined by an epifluorescence microscope (200×; Olympus, X81) or a confocal microscope (ZEISS). For flow cytometry, the cells were quantitatively analyzed by LSR II (BD Biosciences) using FlowJo (Tristar).
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