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9 protocols using fitc conjugated streptavidin

1

Evaluating Splenic and Thymic T Cells

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To analyze splenic and thymic T cell populations, females and males were sacrificed at 3 months and 5 months, respectively. Spleens and thymuses were collected and macerated in MACS buffer and passed through a 70µm filter to create a single-cell suspension. RBCs were lysed with ACK Lysis buffer, and total cell counts were obtained using the Countess Automated Cell Counter. The antibodies used for flow cytometry were: CD3e-Pacific Blue (500A2), CD4-PE (RM4–5), CD8-APC (53–6.7), CD69-FITC (H1.2F3), CD134-Biotin (OX-86), CD62L–APC (MEL-14), and CD25-APC.Cy7 (PC61). All antibodies were obtained from BD Biosciences (San Jose, CA). Biotinylated antibodies were detected using FITC-conjugated streptavidin (BD Biosciences). Thymic and splenic single- and double-positive T cell populations and rates of apoptosis were evaluated by labeling cells with CD4, CD8, Annexin-V, and PI. Splenic T-regulatory (Treg) cells were evaluating by examining the CD3+CD4+CD8CD25hiCD62Llo cell population. Splenic activated T cells were evaluated by examining CD4+CD69+, CD4+CD62Llo, and CD4+CD134+ cell populations. Labeled cells were assayed on an LSR II bench-top flow cytometer, and data was analyzed using FACSDiva (8.0) and plotted using FlowJo X (10.0.7r2) software.
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2

Adhesion Molecule Expression in HUVECs

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HUVECs were seeded in a 24-well plate and treated with sFlt-1 (1 µg/mL) for 4–5 h to analyze adhesion molecule expression. Cells were harvested with Accutase (Sigma-Aldrich, St. Louis, MO, USA), collected by centrifugation (200× g, 5 min), and resuspended in 100 µL FACS buffer (PBS with CaCl2 and MgCl2 containing 0.5% FCS and 0.5% NaN3) containing the following antibodies (1:50 dilution): biotin-conjugated anti-human intercellular adhesion molecule-1 (anti-ICAM-1, BioLegend, San Diego, CA, USA), PE-conjugated anti-human CD62E (anti-E-selectin, eBioscience, San Diego, CA, USA), PerCP/Cy5.5-conjugated anti-human CD62P (anti-P-selectin, BioLegend, San Diego, CA, USA), and APC-conjugated anti-human vascular cell adhesion molecule-1 (anti-VCAM-1, BioLegend, San Diego, CA, USA). Cells were incubated for 20 min at 4 °C, washed, and incubated with FITC-conjugated Streptavidin (1:50 dilution, BD Bioscience, CA, USA) for 20 min at 4 °C. Isotype-matched antibodies served as negative controls, and capture beads (Ultracomp eBeads, Invitrogen, Waltham, MA, USA) were used to set compensation. After washing, the cells were fixed in 1% PFA in FACS buffer and analyzed using the FACSCalibur flow cytometer (BD Bioscience, San Jose, CA, USA). Acquired data were processed with the FlowJo 10.6.2 Software (BD Bioscience, San Jose, CA, USA).
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3

Multiparametric Flow Cytometry Characterization of Cells

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The cells were suspended in ice-cold PBS with 10% FBS at 106 cells/ml, and then stained for 30 minutes on ice with the following monoclonal antibodies (mAbs): biotinylated F4/80; Allophycocyanin (APC)-conjugated CD29, platelet-derived growth factor receptor (PDGFR)α (APA5); fluorescein isothiocyanate (FITC)-conjugated Sca-1 (Ly6A/E), CD45, CD49e; PE-conjugated CD31, CD44, CD73, CD90 and CD105. Biotinylated antibodies were visualized with FITC-conjugated streptavidin (BD Biosciences, BD Biosciences, Oxford, UK). All mAbs were purchased from eBioscience, San Diego, USA, except for CD90 (BD Biosciences). Flow cytometry analyses were performed on a duo-laser BD Accuri C6 flow cytometer. Propidium Iodide (PI) fluorescence was measured, and a live cell gate was defined that excluded the cells positive for PI. Additional gates were defined as positive or negative according to the isotype control fluorescence intensity.
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4

Multicolor Flow Cytometry for T Cell Analysis

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The antibodies (BD Biosciences, San Jose, CA) used for flow cytometry were: CD4-PE (RM4-5), CD4-v450 (RM4-5), CD8-APC (53-6.7), CD69-FITC (H1.2F3), CD134-Biotin (OX-86), CD62L-APC (MEL-14), B220-APC (RA3-6B2), CD86-PE (GL1), CD22-PE (Cy34.1), CD25-APC.Cy7 (PC61), and FoxP3-PE (150D). Biotinylated antibodies were detected using FITC-conjugated streptavidin (BD Biosciences). Flow cytometric analysis was performed using various combinations of these antibodies on single cell suspensions of splenocytes. For intracellular FoxP3 staining, surface-stained cells were treated with fixation/permeabilization buffer and stained with FoxP3-PE (150D) using the BioLegend FoxP3 flow kit, following the manufacturer’s protocol (BioLegend). Stained cells were analyzed in the UNMC Flow Cytometry Research Facility using the BD LSR II flow cytometer. Data were analyzed using FACSDiva software, version 6.1.2 (BD Biosciences). For analysis of T regulatory cells, splenocytes were isolated from mice that were 3–4 months of age. For all other flow cytometry analyses, splenocytes were collected from mice that were 6–12 months of age.
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5

Comprehensive Multiparametric Flow Cytometry

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The antibodies used for flow cytometry included: CD4-PE (RM4-5), CD4-v450 (RM4-5), CD5-PE (53-7.3), CD8-APC (53-6.7), CD19-FITC (ID3), CD22-PE (Cy34.1), CD45R/B220-APC (RA3-6B2), CD62L-APC (MEL-14), CD69-FITC(H1.2F3), CD86-PE (GL1), CD93(AA4.1), CD95-PE.Cy7 (Jo2), CD134-Biotin (OX-86), CXCR5-PE.Cy7 (2G8), PD-1-APC (J43), and PNA-FITC (L7281) (all from BD Biosciences, San Jose, CA), IgM-FITC) (R6-60.2 from Southern Biotech), IgD-APC-Cy7 (11-26c.2a from BioLegend, San Diego, CA, USA), CD21/CD35-eFlour450 [eBio4F3 (4E3)], and CD23-PE-Cy7 (B3B4) (both from eBioscience Inc., San Diego, CA, USA). Biotinylated antibodies were detected using FITC-conjugated streptavidin (BD Biosciences). Flow cytometric analysis was performed using various combinations of these antibodies on single cell suspensions of splenocytes. Stained cells were analyzed in the UNMC Flow Cytometry Research Facility using the BD LSR II flow cytometer. Data were analyzed using FACSDiva software, version 8.0.2 (BD Biosciences). For flow cytometry analyses, splenocytes were collected from mice that were 5–6 months of age.
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6

Histological Analysis of Ileum Apoptosis

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Ileum tissue was harvested as described above and immediately frozen in VWR frozen section compound (VWR, Radnor, PA) for sectioning. Frozen ileum sections were fixed in 4% paraformaldehyde in PBS for 15 minutes at RT and stained with rabbit anti‐cleaved caspase‐3 (1:400; Cell Signaling Technology) and biotinylated mouse anti‐GFP tag (#MA515256BTIN, 1:500; Thermo Fisher Scientific, Waltham, MA). Goat anti‐rabbit IgG (heavy [H]+light [L] chains)‐AlexaFluor 594 (1:500; Jackson ImmunoResearch) and FITC–conjugated streptavidin (BD Biosciences, San Jose, CA) were used for secondary staining. Staining, mounting, and imaging of slides were done as described.16
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7

Purification and Characterization of COVID-19 Proteins

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Purified anti-mouse GM-CSF (clone MP1-22E9) and anti-mouse IL-12 (clone C17.8) mAbs were obtained from BioXcell and used for affinity chromatography purification of GPI-RBD-GM-CSF fusion protein and GPI-IL-12, respectively. Anti-RBD mAb (clone MM57) was obtained from Sino Biologicals (Cat#40592). FITC-conjugated goat secondary antibody against mouse IgG/IgM was purchased from BD Pharmingen (Cat# 555988). Peroxidase (HRP)-conjugated goat anti-mouse IgG F(ab’)2 specific antibody was from ThermoFisher Scientific/Pierce (Cat#31436). The antibody isotyping kit was purchased from Southern Biotech (Cat#5300-05). FITC-conjugated streptavidin was purchased from BD Biosciences (Cat#554060). Human COVID-19 convalescent serum samples were purchased from Ray Biotech (Atlanta, GA, USA). HRP-conjugated donkey anti-human IgG antibody was obtained from Jackson Immunoresearch (Cat#709-036-098). Biotinylated human ACE2 from ACRO Biosystems (Cat#AC2-H82F9) and purified RBD protein from Ray Biotech (Cat#230-30162) were purchased.
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8

Labyrinthin Expression Analysis in Lung Cells

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Mouse monoclonal anti-labyrinthin antibody MCA 44-3A6 was provided by the current lab [9 ] as grown using standard hybridoma technology and purified by 50% saturated ammonium sulphate precipitation and ion exchange chromatography or by a commercial kit (Pierce™ Antibody Clean-up Kit). Cytofix/Cytoperm solution, Perm/Wash buffer, biotinylated goat anti-mouse antibody, Fluorescein-5-isothiocyanate (FITC)-conjugated goat anti-mouse antibody, FITC-conjugated streptavidin, and propidium iodide were obtained from Becton Dickinson. BSA, trypan blue, and sodium azide were obtained from Sigma, and PBS (phosphate buffer saline) was purchased from Media Tech. Cell lines were obtained and grown as recommended by the American Type Culture Collection (Manassas, VA). Labyrinthin-negative WI-38 normal human lung fibroblast cells (negative control) and A549 human lung adenocarcinoma (positive control) cells were used in this experiment. Because adenocarcinomas are neoplasia of epithelial tissue that have a glandular origin, normal primary cultures of human astrocytes, renal proximal tubule epithelial cells, and small airway epithelial cells were selected as counter models in this study.
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9

Purification and Characterization of Monoclonal Antibody

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Cell lines were obtained and grown as recommended by the American Type Culture Collection (Manassas, VA) unless mentioned otherwise. Mouse monoclonal anti-labyrinthin antibody MCA 44-3A6 was produced using well-defined hybridoma technology [44 ]; details of the procedure have been described elsewhere [26 ]. Antibody purification was either by using 50% saturated ammonium sulphate precipitation and ion exchange chromatography or by a commercial kit (Pierce™ Antibody Clean-up Kit).
Reagents and additional cells for FACS analyses: Cytofix/Cytoperm solution, Perm/Wash buffer, biotinylated goat anti-mouse antibody, FITC-conjugated goat anti-mouse antibody, FITC-conjugated streptavidin, and PI were obtained from Becton Dickinson. BSA, trypan blue, and sodium azide were obtained from Sigma, and PBS was purchased from Media Tech. Normal human astrocytes, renal proximal tubule epithelial cells, and small airway epithelial cells were provided by Cambrex/Lonza.
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