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12 protocols using smz1270 stereo microscope

1

Microscopy-based Calibration Methods

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Images for port-, channel-, and barrier-calibrations were taken using an Axiovert 200 M fluorescence microscope (Zeiss). Measurements were performed with the AxioVision software (Zeiss). Low magnification images of the different systems containing dyes were taken with an Iphone SE coupled to a Nikon SMZ1270 stereomicroscope (Nikon, Tokyo, Japan) using an adaptor, as previously described18 (link).
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2

Spiders in Maldives Atolls Investigated

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The sampling was carried out in the Lhaviyani (Faadhippolhu) and North Male' (Uthuruburi) Atoll in the central Maldives in January 2020 (Fig. 1). 15 islands in the Lhaviyani atoll and one island in the North Male' Atoll were investigated. On 15 out of the 16 investigated islands, specimens were found and collected. The collected spiders were fixated in 98% ethanol and stored at 8°C in a freezer at the Department of Animal Ecology, University of Bayreuth, Germany (UBT). Morphology was examined using a Leica DVM6 (Leica Camera AG, Wetzlar, Germany) and a Nikon SMZ1270 stereomicroscope (Nikon Corp., Tokyo, Japan) and photographed with a Canon EOS Kiss x8i (Canon AG, Tokyo, Japan) and Leica Camera AG digital cameras attachments. Resulting photos were combined using the image stacking software Helicon Focus 6.7.1. Morphology of male palp and epigyne were compared to drawings from the recent revision of the genus Draposa (Kronestedt 2010) . The nomenclature follows the World Spider Catalog (2020).
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3

Spore Morphology Analysis of Plant Specimen

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Field observations were conducted in June (in 2015) and October (in 2017) respectively. The photos of plants, leaves, and strobili were taken in the field. All research materials were deposited at KUN and PYU (Index Herbarium: Thiers 2018 ). More details of morphology were observed and photographs were taken using SMZ1270 stereo microscope (Nikon, Japan). Megaspores and microspores were selected and attached to Carbon Adhesive Tape (CAT) using anatomical lens, then samples were coated with gold using the BAL-TEC SCD 005 Cool Sputter Coater (BAL-TEC AG., Liechtenstein) and visualized via QUANTA 200 Scanning Electron Microscope (SEM) (FEI Co., USA) at 25 kV at Yunnan University, Kunming, China. The morphological terminology of spore follows Tryon and Lugardon (1991) (link) and Zhou et al. (2015) (link).
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4

Quantifying Hematopoietic Progenitor Cells

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Colony-forming units (CFUs) in semi-solid methylcellulose were quantified to assess hematopoietic progenitor activity. WBM was flushed from femurs and tibiae using a 26G x 1/2 needle with MACS buffer. Viable cell counts were determined with a hemocytometer using Trypan Blue. WBM cells were plated in duplicate in Methocult GF M3434 methylcellulose (StemCell Technologies 03444) according to the manufacturer’s recommendations. Colonies were scored for phenotypic CFU-GEMM, CFU-GM, CFU-G, CFU-M, and BFU-E colonies using a SMZ1270 Stereo-Microscope (Nikon).
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5

Multimodal Imaging of Immune Cells

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For immunofluorescence, spleens were embedded and frozen in OCT, sectioned at 15 μm and mounted on SuperFrostPlus Adhesion glass (Thermo Fisher Scientific). Sections were dehydrated using silica beads, fixed with 4% paraformaldehyde for 10 min and washed with PBS. Samples were blocked using 5% normal goat serum for 2 h before staining. Samples were incubated with antibodies against B220 (RA3-6B2, eBioscience), CD3 (17A2, eBioscience) and F4/80 (BM8, Biolegend) diluted in 5% NGS for 2 h at room temperature in the dark. After staining, samples were washed with PBS at least three times. Samples were then mounted using ProLong Gold Antifade Mountant (Invitrogen) and imaged using an inverted LSM780 microscope (Carl Zeiss) and a plan apochromat 63× NA 1.40 oil-immersion objective (Carl Zeiss). For haematoxylin and eosin (H&E) staining, organs were collected and fixed in 10% formalin. Fixed samples were embedded in paraffin and sectioned at 10 μm, mounted on SuperFrostPlus Adhesion glass and stained using H&E. Mounted samples were imaged using a Nikon SMZ1270 Stereo Microscope. Imaging data were analysed using Fiji (ImageJ) software (NIH).
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6

Imidacloprid Topical Exposure on Lepidopteran Larvae

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Studies were conducted on 1- or 2-day-old final-instar larvae of European corn borers (fifth instar), corn earworms (sixth instar), fall armyworms (sixth instar), painted ladies (fifth instar), red admirals (fifth instar), and wax moths (sixth instar). All larvae were placed in individual rearing containers and randomly assigned a treatment prior to starting a bioassay. One μL of acetone or an imidacloprid-acetone solution was placed on the dorsal prothorax using a 10 μL pipette. Five imidacloprid concentrations and an acetone control were used. At least ten larvae were treated in each of the six groups and five control larvae were weighed prior to treatment. Daily observations for mortality were taken until pupation and at adult eclosion. Signs of larval intoxication (e.g., spasms, paralysis) and formation of malformed pupae were recorded. Dissections were performed on a subset of larvae that had AE. Photographs were taken with a Nikon DS-Ri2 digital camera connected to a Nikon SMZ1270 stereo microscope. The results obtained were compared to topical imidacloprid exposures conducted on fifth instar monarch butterfly14 (link),15 (link) to provide a more complete description of AE.
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7

Immunofluorescence and Histological Analysis

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For immunofluorescence, spleens were embedded and frozen in OCT, sectioned at 15 μm and mounted on SuperFrostPlus Adhesion glass (Thermo Fisher Scientific). Sections were dehydrated using silica beads, fixed with 4% paraformaldehyde for 10 min and washed with PBS. Samples were blocked using 5% normal goat serum for 2 h before staining. Samples were incubated with antibodies against B220 (RA3-6B2, eBioscience), CD3 (17A2, eBioscience) and F4/80 (BM8, Biolegend) diluted in 5% NGS for 2 h at room temperature in the dark. After staining, samples were washed with PBS at least three times. Samples were then mounted using ProLong Gold Antifade Mountant (Invitrogen) and imaged using an inverted LSM780 microscope (Carl Zeiss) and a plan apochromat 63× NA 1.40 oil-immersion objective (Carl Zeiss). For haematoxylin and eosin (H&E) staining, organs were collected and fixed in 10% formalin. Fixed samples were embedded in paraffin and sectioned at 10 μm, mounted on SuperFrostPlus Adhesion glass and stained using H&E. Mounted samples were imaged using a Nikon SMZ1270 Stereo Microscope. Imaging data were analysed using Fiji (ImageJ) software (NIH).
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8

Visualizing Reactive Oxygen Species in Plant Roots

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H2O2 was detected in roots using the 2',7'-dichlorodihydrofluorescein diacetate (H2DCFDA) staining method. The roots from 7-day-old seedlings were incubated in H2O containing 50 µM H2DCFDA for 30 min under dark conditions. Then, the roots were rinsed with sterilized water three times. The fluorescent signals were observed with an Echo Revolution microscope (Echo). The excitation and emission wavelengths used for detection of the signals were 488 nm and 520 nm, respectively.
To detect superoxide, seedlings were stained for 2 min in a solution of 2.5 mM Nitroblue tetrazolium (NBT) in 50 mM phosphate buffer (pH 6.1) in the dark and then rinsed three times with distilled water49 (link). Images for NBT staining were obtained using a 1× objective with a Nikon SMZ1270 Stereo microscope.
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9

Imaging Biofilm Pellicle Formation

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Pictures of biofilm pellicles of GA1 formed at the air-liquid interface were taken with a Nikon SMZ1270 stereomicroscope (Nikon, Japan) equipped with a Nikon DS-Qi2 monochrome microscope camera and a DS-F 1× F-mount adapter. Pictures were captured in the bright field channel with an ED Plan Apo 1×/WF objective and a 0.63x magnification of with an exposure time of 40ms. Additionally, pictures of biofilm pellicles at 6h were captured with a 3x magnification and an exposure time of 10ms to get a better view of the structures in formation. Acquisitions were then processed with NIS-Element AR software (Nikon, Japan).
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10

GUS Reporter Staining in Arabidopsis

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GUS staining was performed according to standard protocols. Briefly, seedlings of homozygous transgenic lines carrying the GUS-reporter constructs were incubated overnight at 37°C in GUS staining solution [0.5 mM K 4 Fe(CN) 6 , 0.5 mM K 3 Fe(CN) 6 , 0.1% Triton X100, 0.5 mg/mL X-Gluc in DMF, 50 mM NaH 2 PO 4 pH7.0]. Chlorophyll was removed by incubation in aqueous solutions containing increasing ethanol concentrations (20, 35, 50 and 70% (v/v) final concentration). Older leaves, flowers and siliques were fixed for 30 min with a solution containing 90% (v/v) absolute ethanol and 10% acetic acid and further incubated for 1 h in 90% (v/v) ethanol. The final preparations were stored in 70% (v/v) ethanol. Pictures were taken with a SMZ1270® stereomicroscope (NIKON).
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