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5 protocols using 3 trimethylsilyl propionic 2 2 3 3 d4 acid sodium salt tsp

1

Tibetan Medicine Chemical Analysis

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RQCJ was obtained from Tso-Ngon Tibetan Medicine
Hospital (QingHai, China). Analytical pure K2HPO4 and NaH2PO4 were purchased from Sigma-Aldrich
(St. Louis, MO, U.S.A.). Deuterium oxide (D2O, 99.9% D)
and 3-(trimethylsilyl)-propionic-2,2,3,3-d4 acid sodium salt (TSP, 98.0% D) were purchased from Cambridge Isotope
Laboratories, Inc. (MA, U.S.A.). Standard stock solutions of mercury
and arsenic were obtained from the Central Iron & Steel Research
Institute (Beijing, China).
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2

Urine Sample Preparation for NMR Metabolomics

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All chemicals used for the buffer solution were purchased from Sigma-Aldrich except for the 2H2O which was purchased from Cortecnet and the 3-(trimethylsilyl)propionic-2,2,3,3-d4 acid sodium salt (TSP) from Cambridge Isotope Laboratories Inc. 96-well plates and NMR tubes were purchased from Bruker Biospin Ltd. (Germany).
Aliquots of 0.5 ml urine per sample were thawed overnight at 4°C. Cellular components and other insoluble material were then spun down by centrifugation for 10 min at 3184 g and 4°C and the supernatants were transferred into 96-well plates. 270 μL of urine from each sample were mixed with 30 μL buffer solution in 2H2O (pH = 7.4) containing 1.5 M K2HPO4, 2 mM NaN3 and 4 mM of TSP-2,2,3,3-d4 as an internal standard and chemical shift reference (0.4 mM final concentration in each sample). Finally, 165 μL of each urine-buffer mixture were transferred to 3 mm SampleJet NMR tubes and placed in refrigerated racks (6°C) of a SampleJet system until the NMR measurements. Both mixing of urine with buffer and transfer of the mixture to NMR tubes were performed by two 215 Gilson liquid handler robots and controlled by the SampleTrack software (Bruker Biospin Ltd.).
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3

Comprehensive Metabolic Analysis Protocol

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Lead nitrate (Pb(NO3)2), sodium lauryl sulfate, creatinine anhydrous, propionic acid, lithium d-, and l-lactate, acetylacetone, 37% formaldehyde, cimetidine, indoleacetic acid, methylumbelliferone, and methylumbelliferyl N-acetyl-β-d-glucosaminide were purchased from Sigma-Aldrich Fine Chemicals Inc. (MO, USA). Formic acid, HPLC grade acetonitrile (ACN), ethanol and methanol (MeOH) were purchased from Merck (Darmstadt, Germany). Hippuric acid, 2,2′-dipyridyl disulfate (DPDS), triphenylphosphine (TPP) and 4-nitro-7-piperazino-2,1,3-benzoxadiazole (NBD-PZ) were purchased from Tokyo Chemical Industry Co., Ltd. (Tokyo, Japan). 5-Aminolevulinic acid hydrochloride and guanidinoacetic acid were purchased from Alfa Aesar (MA, USA). Sulbactam was purchased from Cayman Chemical (Michigan, USA). Acetic acid was purchased from Hayashi Pure Chemical Ind.,Ltd. (Osaka, Japan). Trifluoroacetic acid (TFA) was purchased from Riedel-de Haën (Seelze, Germany). 3-(Trimethylsilyl)propionic-2,2,3,3-d4 acid sodium salt (TSP) was purchased from Cambridge Isotope Laboratories (MA, USA). 1,1-Dimethylbiguanide hydrochloride (metformin) was purchased from Santa Cruz Biotechnology, Inc. (Texas, USA). Protein Assay Dye Reagent was purchased from Bio-Rad Laboratories (California, USA).
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4

Ginseng Root Chemical Profiling

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Fresh roots of 5-year-old ginseng were collected from Fusong county, Jilin province, China. The samples were taxonomically identified by Changchun University of Chinese Medicine, and a voucher specimen (No. 202105) was deposited at the laboratory of Jilin Ginseng Academy, Changchun University of Chinese Medicine, Changchun, China.
UPLC grade acetonitrile was obtained from Tedia Company Inc., (Fairfield, OH, USA). Purified water was made by a water purifier (Global Water Solution Ltd., Randolph, MA, USA). Other reagents and chemicals of analytical grade, including methanol, ethanol, n-butanol, trichloromethane, DMSO, Na2HPO4·12H2O and NaH2PO4·2H2O, were purchased from Beijing Chemical Works, (Beijing, China). Phosphate buffer (PBS, 0.1M, pH 7.6), containing 0.05% 3-(trimethylsilyl)-propionic-2,2,3,3-d4 acid sodium salt (TSP) as an internal standard, was acquired from Cambridge Isotope Laboratories Inc. (Andover, MA, USA). Deuterium Oxide (D2O 99.9% atom% D) was purchased from Tenglong Weibo Technology Co., Ltd. (Qingdao, China). The standards Ginsenoside Rg1, Ginsenoside Rf, Ginsenoside F1, Ginsenoside RK1, Ginsenoside Rd were all obtained from Beijing Science and Technology (Beijing, China), the purity of all standards was greater than 98%.
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5

NMR Sample Preparation for Plasma

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All chemicals used in the buffers were purchased from Sigma-Aldrich (USA), with the exception of D 2 O heavy water (Cortecnet; France) and 3-(trimethylsilyl) propionic-2,2,3,3-d4 acid sodium salt (TSP) (Cambridge Isotope Laboratories Inc., UK). We made two buffer solutions. Buffer A was a sodium phosphate buffer in H 2 O/D 2 O (80/20) with pH 7.4, containing 6.15 mmol/L NaN3 and 4.64 mmol/L TSP. Buffer B was a sodium phosphate buffer in D 2 O (pH 7.4), containing 1.5 mol/L K 2 HPO 4 , 2 mmol/L NaN3, and 4 mmol/L TSP. Ritter Deepwell 96-well plates were purchased from Novaveth BV (Netherlands), NMR tubes from Bruker Biospin Ltd (Germany). The plasma samples were thawed at 4 °C and mixed through 10 rotations of the tubes. After that, samples (120 μl) were mixed with 120 μl of buffer solution. For each sample, 190 μl of buffer and plasma mixture were transferred to 5 mm tubes with the help of a modified Gilson 215 tube filling station, and then kept at 6 °C in the sample changer.
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