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Rpmi media

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RPMI media is a commonly used cell culture medium that provides the necessary nutrients and growth factors for the in vitro cultivation of a variety of mammalian cell types, including human and animal cells. It is a complex formulation of essential amino acids, vitamins, salts, and other components required for cell growth and proliferation.

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445 protocols using rpmi media

1

Ramos B cell calcium flux assay

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Ramos B cell calcium flux was measured as described (75 (link)). Protein tetramers were formed at a 4:1 molar ratio of protein to streptavidin (Invitrogen). Ramos cell lines stably expressing DH270 UCA, DH270.1, or CH65 IgM (76 (link)) were passaged (1:10) 4 days before calcium flux experiments. On the day of the experiment, cells with >95% viability were resuspended at 106 cells ml−1 in 2:1 ratio of RPMI media (GIBCO) + FLIPR Calcium 6 dye (Molecular Devices). Cells were plated in a U-bottom 96-well tissue culture plate (Costar) and incubated at 37°C 5% CO2 for 2 hours. In a black clear-bottom 96-well plate (Costar) containing 50 μl of RPMI media (GIBCO) + FLIPR Calcium 6 dye (Molecular Devices) (2:1 ratio) either 0.1 nmol of proteins or 50 μg ml−1 of anti-human IgM F(ab’)2 (Jackson Immuno) were added (based on a 100-μl volume). Using a FlexStation 3 multimode microplate reader (Molecular Devices), 50 μl of supernatant containing cells were transferred into the 50 μl of media containing protein or anti-human IgM F(ab’)2 (Jackson Immuno) and continuously read for 5 min. Relative fluorescent value units were background-subtracted and the data expressed as percentage of the IgM maximum signal (% IgM max).
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2

DENV Propagation and Cell Culture

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DENV was propagated in C6/36 cells (ATCC), and the DENV2 D2S10 strain (passaged 4 times in C6/36 cells) was derived in the laboratory of Dr. Eva Harris at the University of California, Berkeley from the parental DENV2 PL046 Taiwanese isolate as described [29 (link)]. U937-DC-SIGN cells were obtained from A. de Silva (University of North Carolina, Chapel Hill) and grown in RPMI media (Invitrogen) at 37°C and 5% CO2. K562 cells (obtained from ATCC) were grown in RPMI media (Invitrogen) at 37°C and 5% CO2.
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3

Splenocyte Culture Assessing Tat and Morphine Effects

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Primary splenocyte cultures were prepared as previously described (Avitsur et al., 2001 (link); Kinsey et al., 2007 (link)) and were used to assess the ability of prolonged HIV-1 Tat and morphine to alter glucocorticoid-induced inhibition of peripheral immune cell viability. Briefly, mice were sacrificed 24 h after administration of the final dose of morphine (or vehicle) and spleens were harvested. Tissues were passed through a 70 μm pore nylon mesh (Greiner Bio-One) with 10 mL of RPMI media (#22400089, Life Technologies) to prepare a cell suspension. Cells were lysed with a hypotonic salt solution (0.16 M NH4Cl, 10 mM KHCO3, 0.13 mM EDTA) and suspended in RPMI media (#22400089, Life Technologies), supplemented with 10% heat-inactivated fetal bovine serum (FBS; #SH30071.03, Thermo Scientific), 7.5% NaHCO3 (#25080094, Life Technologies), and antibiotic/antimycotic mixture (Life Technologies), centrifuged, and filtered through a 70 μm pore nylon mesh (Greiner Bio-One). Duplicate splenocyte samples were seeded onto 96-well plates with corticosterone and stimulated with LPS for 48 h.
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4

Differentiation and Purification of hiPSC-Derived Cardiomyocytes

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Wild type and mutated WTC hiPSCs were differentiated into cardiomyocytes using a previously described monolayer protocol (ref [31 (link)], details in Expanded Methods), and maintained in RPMI media (Gibco) supplemented with 2% B-27 with insulin (Life Technologies) and 1% penicillin/streptomycin (Invitrogen). For single cell force, calcium, and morphology measurements and live cell imaging cardiomyocytes were purified using lactate selection by replating cells 14–18 days after the start of differentiation and feeding with DMEM without glucose (Gibco) supplemented with 4 μM sodium lactate (Sigma-Aldrich) on days 18–22 after differentiation32 (link). Cells used for calcium and morphology measurements were cultured in media containing 10 μM cytosine β-D-arabinofuranoside (Sigma-Aldrich) for 2 days following replating as single cardiomyocytes.
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5

Culturing Jurkat E6.1 Cells in RPMI

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Jurkat E6.1 cells (obtained from ATCC) were cultured in RPMI media (GIBCO) containing 10% heat inactivated fetal calf serum to a maximum density of 2 × 106 cells/ml.
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6

Generation of Chimeric Mice for Immunology Research

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For BM chimeras, acidic drinking water (pH 2,5–3,0) was given for 8 days to B6 x B6.SJL F1 (CD45.2+ CD45.1+) recipient mice prior to irradiation with a lethal single dose of 800 rad (TH780C - Theratronics, Canada).The day after irradiation, BM cells were transferred and mice were treated with neomycin sulfate (2 mg/mL) in the drinking water for 15 days. Marrow was harvested from the femur and tibia of B6.SJL (CD45.1+) and B6, Myd88−/−, Il1r1−/−or Il18r1−/− (CD45.2+) mice by flushing with cold RPMI media (GIBCO). BM cells were washed thoroughly with PBS and 4 × 106 total cells were injected into the irradiated recipient mice. For mixed chimeras, CD45.1+ and CD45.2+ BM cells were transferred in a 1:1 ratio (2 × 106 cells each). Alternatively, non-irradiated mixed chimeric Rag2−/− mice were generated by the iv injection of 20 × 106 spleen cells from WT B6.SJL (CD45.1+) and Myd88−/− (CD45.2+) mice in a 1:1 ratio. Six to eight weeks after the first reconstitution, Rag2−/− mice received a second injection of WT B6 x B6.SJL F1 (CD45.1+CD45.2+) and Myd88−/− (CD45.2+) splenocytes in a 1:1 ratio, 6 hr before being infected. In all experiments, mice were infected 6 to 8 weeks after cell transfer, when reconstitution was achieved.
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7

Murine and Human Cell Culture Protocol

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B6 ALL cells were a kind gift of Dr Nidal Boulos (St. Jude Children's Research Hospital, Memphis, TN [11 (link)]). All human cell lines were maintained in RPMI media (Gibco, Carlsbad, CA) supplemented with 10% FBS, penicillin and streptomycin. Cells were grown at 37°C with 5% CO2. All murine cells were maintained in B cell media (45% DMEM, 45% IMDM, 10% FBS, supplemented with penicillin and streptomycin). Viability assays were done using the Cell Titer-Glo assay (Promega, Madison, WI) according to the manufacturer's protocol or by Trypan blue exclusion assay using the Countess cell counting system (Invitrogen, Carlsbad, CA). All viability assays were done in triplicate in at least three separate experiments (at least 9 values for each concentration tested).
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8

Transgenic Expression of PvTRAg Genes

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Entire open reading frame of PvTRAg36.6 (960 bp) and PvTRAg56.2 (1394 bp) genes were custom synthesized commercially (Biolinkk, New Delhi, India) and were cloned into transfection vector pARL1a-GFP which expresses genes under the control of Pfcrt (P.falciparum chloroquine resistant transporter) promoter, in KpnI and BglII cloning sites to generate transgenic constructs: pARL1a-PvTRAg36.6 and pARL1a PvTRAg56.2. The PvTRAg56.2 gene was also cloned in pARL1a-GFP vector consisting of late stage promoter, pfama1 (P.falciparum apical membrane antigen).
Plasmodium falciparum 3D7 parasites were cultured with human erythrocytes at 4% haematocrit in RPMI media (Gibco Co, Auckland, Grand Island, USA) supplemented with 5% Albumax I (Gibco) following Trager and Jensen (Trager and Jensen, 1976). Synchronized ring stage parasites were transfected with 100 μg of each recombinant plasmid [33 (link)] by electroporation (310V, 950 μF). Parasites were maintained under the 5 nM WR99210 drug pressure. Resistant parasites appeared after one to two months of transfection.
To ascertain the expression of PvTRAg-GFP fusion proteins in the transgenic line, parasite lysates were subjected to 10% SDS-PAGE and western blot analyses using monoclonal anti-GFP antibody (1:2000 dilution).
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9

Cell Line Maintenance Protocol

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K562 cells were purchased from the ATCC and OCI-AML3 were the kind gift of Dr Mark Minden at University of Toronto. All human cell lines were maintained in RPMI media (Gibco, Carlsbad, CA) supplemented with 10% FBS, penicillin and streptomycin. Cells were grown at 37°C with 5% CO2.
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10

Murine and Human Naïve CD4+ T Cell Culture

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Murine naïve CD4+T cells were defined as CD4+CD25Foxp3GFPCD44low for Foxp3-GFP reporter mice and as CD4+CD25CD44low for non-reporter mice. Cells were sorted with a FACSAriaIII (BD) cell sorter for purity. Murine naïve CD4+T cells were cultured for 18 hours in RPMI media (Gibco by life technologies) supplemented with 10% FCS, 1 mM sodium pyruvate (Sigma Aldrich), 50 mM β-mercaptoethanol (Amimed), 1X non-essential amino acids (Merck Millipore), 100 U/ml human recombinant IL-2 (ReproTech), 100 U/ml penicillin and 100 μg/ml streptomycin (Sigma Aldrich), while human naïve CD3+CD4+CD45RA+CD45ROCD127+CD25 T cells were cultured in Vivo15 Medium supplemented with 2 mM glutamine, penicillin (50 U/ml), streptomycin (50 μg/ml), and 5% (vol/vol) heat-inactivated human AB serum (Invitrogen) in 96-well plates pre-coated with 5 μg/ml anti-CD3e (145-2C11, BD Pharmingen) and 5 μg/ml anti-CD28 (37.51, BD Pharmingen). TCR stimulation was limited to 18 hours by transferring cells into uncoated wells. Cells were cultured for additional 36 hours without further TCR stimulation.
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